mRNA_H-paniculata_contig494.12123.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig494.12123.1
Unique NamemRNA_H-paniculata_contig494.12123.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig494.12123.1 vs. uniprot
Match: D8LGH3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGH3_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 8.850e-67
Identity = 145/346 (41.91%), Postives = 191/346 (55.20%), Query Frame = 2
Query:  179 RREEISGQRLWEGSLLLCAHLLKVCKAGGGSDEQST--------QLDLRGKTALELGAGTGLVSMLAHGLGAALVAVTDGDERCVLMADKNMKENNIPAAAAFVSTLRWGDSGSTLAFCKTYKRWATAAQRVFADQLRKGHASA--PNSKMEPTLTERLESEPGINGVADDVRARPMAPLAGQEDPTIIPEHIAT-VTXXXXXXXXXXXXRPALP----PQGLFDFILAGDVLYKQTLLEPFLGTVEEMLAPNGRLLLCHVPRAGVTYDIVEDAFTRNRLAFTVVDGSKDKMEING--------GRD-------------------DVGGVELCMDDARRARLYSV 1090
            + EEISGQRLWEGSLLLCA+L++VC+    +             +LDL+GK+ LELGAGTG+V MLA  LGA  + +TDGD++CV MA KN+++N++P   A V+ LRWG+  ST  FCK +  W +          + G ASA  P   +     ++  S PG   V     A   +P A   +  +  +  +T               R +LP    P   FDFILAGDVLYK +LLEPFL TV +MLA  GR+LLCH+PRAGVTYDIVE AF +   AF +++G   +    G        G+D                   DVGG+ELC+DDARRARLY +
Sbjct:    3 KSEEISGQRLWEGSLLLCAYLVEVCRNEDSNSSAGDCCRGMGKPKLDLQGKSVLELGAGTGIVGMLAAKLGAQTLILTDGDDKCVAMAQKNIQDNDVPFDQALVTALRWGEEESTTKFCKDFSEWDSRRVIGTGSGGKNGVASAAGPTKSLAAGAQDKA-SVPGDVAVC----AHGHSPNASSGNGHLNEDPASTSCEGQDRNVGPPPPPRDSLPSSPSPLKSFDFILAGDVLYKHSLLEPFLRTVRDMLAAGGRMLLCHIPRAGVTYDIVERAFAQAGFAFEILNGDNKEEGSKGHSSGGEGGGKDVGRADAPTEGAAGGHCDAPDVGGIELCVDDARRARLYEL 343          
BLAST of mRNA_H-paniculata_contig494.12123.1 vs. uniprot
Match: A0A835YP02_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP02_9STRA)

HSP 1 Score: 124 bits (312), Expect = 3.740e-28
Identity = 126/387 (32.56%), Postives = 176/387 (45.48%), Query Frame = 2
Query:   59 DEFELEYDVQEVCLSKE-----LVYKVTTVANEALPLEMLLQLESRREEISGQRLWEGSLLLCAHLLKVCKAGGGSDEQSTQLDLRGKTALELGAGTGLVSMLAHGLGAALVAVTDGDERCVLMADKNMKENNIPAAAAFVSTLRWGDSGSTLAFCKTYKRWATAAQRVF--------------------ADQLRKGHASA--PNSKMEPTLTER--LESEPGIN-------------GVADDVRARPMAPLAGQEDPTIIPEHIATVTXXXXXXXXXXXXRPALPPQGLFDFILAGDVLYKQTLLEPFLGTVEEMLAPNGR-LLLCHVPRAGVTYDIVEDAFTRNRLAFTVVDGSKDKMEINGGRDDVGGVELCMDDARRARLYSV 1090
            DE +LEY+ Q V +  E     +  KVT++ANEALPLEMLL LE+R+ EISGQRLWEGSLLLC H++                 + GK  LELGAG G+V +    LGAA V +TDGD +C+ +  +N+  NN+ A A   + L+WG++ +  A       +  A   ++                      QL  G A+A  P  +  P+ ++     SE G++              VA  V    +A L   +    +    A+  XXXXXXXXXXXX PA                          G   +    + R LLLCH+PRAGV +  V  A     L      G++      G    V G  +C DD  RA++Y++
Sbjct:    4 DESDLEYEEQTVTVGSEASGRQMTLKVTSLANEALPLEMLLALEARKHEISGQRLWEGSLLLCNHVIAHFAHA-----------IVGKRVLELGAGCGIVGLTCAKLGAAEVYITDGDAKCLPLIGQNITANNLSAVAK-AAVLKWGNAAALAALSPLPFDFVVAGDVLYKKELVAPLLSTVRAALRWPPCSQLGLGLAAAGAPGGRQVPSASDSRVASSESGVSTSGXXXXXXXXXXXVATGVAGADVATLRAADKQDSLEAAGASAAXXXXXXXXXXXXXPAA-------------------------GATRQRHGSSDRGLLLCHIPRAGVEHCQVAAAL--RELRAPPGGGARSLAVSAGDGGGVAGTAVCDDDVARAQVYAL 351          
BLAST of mRNA_H-paniculata_contig494.12123.1 vs. uniprot
Match: A0A7S2XZT6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZT6_9STRA)

HSP 1 Score: 113 bits (282), Expect = 3.630e-25
Identity = 94/324 (29.01%), Postives = 136/324 (41.98%), Query Frame = 2
Query:  146 LPLEMLLQLESRREEISGQRLWEGSLLLCAHLLKVCKAGGGSDEQSTQLDLRGKTALELGAGTGLVSMLAHGLGAALVAVTDGDERCVLMADKNMKENNIPAAAAFVSTLRWGDSGSTLAFCKTYKRWATAAQRVFADQLRKGHASAPNSKMEPTLTERLESEPGINGVADDVRARPMAPLAGQEDPTIIPEHIATVTXXXXXXXXXXXXRPALPPQGLFDFILAGDVLYKQTLLEPFLGTVEEMLAP--------NGRLLLCHVPRAGVTYDIVEDAFTRNRLAFTVVDGSKDKMEINGGRDDVGGVELCMDDARRARLYSVT 1093
            LPLE+L  LESR++EISG+RLW GS +L   ++ + +A          L   GK  +ELGAGTG+  MLA  LGA  V +TDGD+ CV    +N+++N++   +   + L WGD  S  +F +                                                         +AG                               PP   FD ++AGDVLYK +L +PF  T  ++L+         +G LLLCH+PRAGV  + V+      +  FTV      K E++     V  +E   DD +RA +Y +T
Sbjct:    3 LPLEVLADLESRKDEISGRRLWSGSTILAHFMINISEATA----IGRSLSFSGKNVVELGAGTGVCGMLARYLGAQKVLITDGDKECVNFIKENLQDNSMDDGSCTAAHLFWGDRESMASFQE---------------------------------------------------------VAG-------------------------------PPP--FDVVIAGDVLYKHSLCQPFFETARQLLSSPTDENRDGDGFLLLCHIPRAGVEQEEVQAI--AEQTGFTV-----SKQELDQSALSVDSIEN--DDLQRAAVYMMT 223          
BLAST of mRNA_H-paniculata_contig494.12123.1 vs. uniprot
Match: A0A8J2SGM5_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGM5_9STRA)

HSP 1 Score: 109 bits (273), Expect = 4.560e-23
Identity = 92/315 (29.21%), Postives = 120/315 (38.10%), Query Frame = 2
Query:  146 LPLEMLLQLESRREEISGQRLWEGSLLLCAHLLKVCKAGGGSDEQSTQLDLRGKTALELGAGTGLVSMLAHGLGAALVAVTDGDERCVLMADKNMKENNIPAAAAFVSTLRWGDSGSTLAFCKTYKRWATAAQRVFADQLRKGHASAPNSKMEPTLTERLESEPGINGVADDVRARPMAPLAGQEDPTIIPEHIATVTXXXXXXXXXXXXRPALPPQGLFDFILAGDVLYKQTLLEPFLGTVEEMLAPNGRLLLCHVPRAGVTYDIVEDAFTRNRLAFTVVDGSKDKMEINGGRDDVGGVELCMDDARRARLYSV 1090
            LPLE L  LES+R+EISGQR W GSLLL A +         S   +   D   +  +ELGAG GL +M+A   GA + A TDGD+RC+ +  +N+  N +      VS   WG                                                                                                     PP G  D +LAGDVLYK+ L+EPFL  +E  LAP GR LLCH+PRAGV++++VE A      A     G      +        G +   DDA  AR+Y +
Sbjct:   34 LPLETLFALESKRDEISGQRAWPGSLLLAAEI---------SARPALVAD---RAVVELGAGAGLCAMVAARCGARMTAATDGDDRCLDLLTRNVAANGLDGVVT-VSKCFWGRDA--------------------------------------------------------------------------------------------------PPVG--DLVLAGDVLYKRALVEPFLDALEAALAPGGRALLCHLPRAGVSHEVVEAALRAREAA-----GGPALAAVRAPASAEFGDDCTADDAAAARVYEL 230          
BLAST of mRNA_H-paniculata_contig494.12123.1 vs. uniprot
Match: A0A1V9ZFX3_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZFX3_9STRA)

HSP 1 Score: 100 bits (248), Expect = 3.080e-20
Identity = 90/349 (25.79%), Postives = 140/349 (40.11%), Query Frame = 2
Query:   71 LEYDVQEVCLSKELVYKVTTVANEALP--LEMLLQLESRREEISGQRLWEGSLLLCAHLLKVCKAGGGSDEQSTQLDLRGKTALELGAGTGLVSMLAHGLGAALVAVTDGDERCVL------MADKNMKENNIPAAAAFVSTLRWGDSGSTLAFCKTYKRWATAAQRVFADQLRKGHASAPNSKMEPTLTERLESEPGINGVADDVRARPMAPLAGQEDPTIIPEHIATVTXXXXXXXXXXXXRPALPPQGLFDFILAGDVLYKQTLLEPFLGTVEEMLAPNGRLLLCHVPRAGVTYDIVEDAFTRNRLAFTVVDGSKDKMEINGGRDDVGGVELCMDDARRARLYSVT 1093
            +EY +  + +  +L +++  +   +L     ML ++++   EISGQR+W GS LL  ++             + +  +  K  LELGAGTGLVS++A   GA  V  TDGD   V       +A+    + N+ AA+ F     WG+S S+ AF + + +                                                                                           LFD I+AGDVLYK  L+   L +V+E L PNG  +LCH+PRA V++++++ A T   +AF +   +   M  N   D        +DDA+RA LY +T
Sbjct:   15 VEYGLSTIAIGTDLRFRIRQMEELSLAASFSMLSEMKATSSEISGQRIWPGSYLLAEYV------------HANKDLVANKRVLELGAGTGLVSLVAQIAGATNVVATDGDVEVVKEILAWNIANNAKADGNVKAASLF-----WGNSTSSAAFQEQFGK------------------------------------------------------------------------------------------DLFDVIVAGDVLYKGELIPLLLASVKEWLQPNGIFVLCHIPRADVSHEVLQKALTEQNMAFAI---TTKLMRTNLPED------CTVDDAKRALLYHIT 247          
BLAST of mRNA_H-paniculata_contig494.12123.1 vs. uniprot
Match: A0A1V9YS28_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YS28_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.640e-19
Identity = 92/344 (26.74%), Postives = 138/344 (40.12%), Query Frame = 2
Query:   71 LEYDVQEVCLSKELVYKVTTVANEALP--LEMLLQLESRREEISGQRLWEGSLLLCAHLLKVCKAGGGSDEQSTQLDLRGKTALELGAGTGLVSMLAHGLGAALVAVTDGDERCVL-MADKNMKENNIPAAAAFVSTLRWGDSGSTLAFCKTYKRWATAAQRVFADQLRKGHASAPNSKMEPTLTERLESEPGINGVADDVRARPMAPLAGQEDPTIIPEHIATVTXXXXXXXXXXXXRPALPPQGLFDFILAGDVLYKQTLLEPFLGTVEEMLAPNGRLLLCHVPRAGVTYDIVEDAFTRNRLAFTVVDGSKDKMEINGGRDDVGGVELCMDDARRARLYSVT 1093
            +EY +  + +  +L +++  +   +L     ML ++ +   EISGQR+W GS LL  +L             + +  + GK  LELGAGTGLVS++A   GAA +  TDGD   V  +   N++ N   A     ++L WGD  S  AF + +                 G A                                                                         LFD +LAGDVLYK  L+   L +V+  L  +G  LLCH+PRA V++D+++ A   +  AF    G   K+  +   DD       +DDA+RA LY++T
Sbjct:   16 VEYGLSTIRIGSDLRFRIRQMEELSLAASFSMLSEMTATSSEISGQRIWPGSYLLAEYL------------HANKDLVAGKRTLELGAGTGLVSLVARLDGAASLVATDGDLEVVNDILTWNVQTNAPDATNLHTTSLWWGDEASNTAFAERF-----------------GSA-------------------------------------------------------------------------LFDRVLAGDVLYKGELVPLLLASVKTWLKSDGTFLLCHIPRADVSHDVLQSALAAHGFAF----GITTKLARDNLPDD-----CAVDDAKRALLYTIT 248          
BLAST of mRNA_H-paniculata_contig494.12123.1 vs. uniprot
Match: A0A067BSN2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BSN2_SAPPC)

HSP 1 Score: 95.5 bits (236), Expect = 1.250e-18
Identity = 91/344 (26.45%), Postives = 141/344 (40.99%), Query Frame = 2
Query:   71 LEYDVQEVCLSKELVYKVTTVANEALP--LEMLLQLESRREEISGQRLWEGSLLLCAHLLKVCKAGGGSDEQSTQLDL-RGKTALELGAGTGLVSMLAHGLGAALVAVTDGDERCVL-MADKNMKENNIPAAAAFVSTLRWGDSGSTLAFCKTYKRWATAAQRVFADQLRKGHASAPNSKMEPTLTERLESEPGINGVADDVRARPMAPLAGQEDPTIIPEHIATVTXXXXXXXXXXXXRPALPPQGLFDFILAGDVLYKQTLLEPFLGTVEEMLAPNGRLLLCHVPRAGVTYDIVEDAFTRNRLAFTVVDGSKDKMEINGGRDDVGGVELCMDDARRARLYSV 1090
            +EY +  + + ++L +++  +   +L     ML ++++   EISGQR+W GS LL  +L                +D+   K  LELGAGTGL S+++   GA  +  TDGD   V  +   N++ N   A     ++L WGD+ S  +F          A+R F D                                                                               G FD ++AGDVLYK  L++  L TV   LAP+GR +LCH+PRA V++D+++ A T +   FT    + D+  +    DD       +DDA+RA LY +
Sbjct:   16 VEYGLSTIRIGRDLRFRIRQMEELSLAASFSMLSEMKATSSEISGQRIWPGSYLLAEYL-------------HAHVDIVAAKRVLELGAGTGLASLVSRLAGATDLVATDGDLEVVNDVLAWNVQSNAPDATNLHTASLWWGDAASNASF----------AER-FGD-------------------------------------------------------------------------------GRFDVLIAGDVLYKGELVQLLLSTVRTWLAPHGRFVLCHIPRADVSHDVLQAALTAHGFRFTTTT-TLDRANLP---DD-----CTVDDAKRAILYDI 247          
BLAST of mRNA_H-paniculata_contig494.12123.1 vs. uniprot
Match: A0A6G0WHQ3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHQ3_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 4.870e-17
Identity = 85/344 (24.71%), Postives = 139/344 (40.41%), Query Frame = 2
Query:   68 ELEYDVQEVCLSKELVYKVTTVANEALP--LEMLLQLESRREEISGQRLWEGSLLLCAHLLKVCKAGGGSDEQSTQLDLRGKTALELGAGTGLVSMLAHGLGAALVAVTDGDERCVL-MADKNMKENNIPAAAAFVSTLRWGDSGSTLAFCKTYKRWATAAQRVFADQLRKGHASAPNSKMEPTLTERLESEPGINGVADDVRARPMAPLAGQEDPTIIPEHIATVTXXXXXXXXXXXXRPALPPQGLFDFILAGDVLYKQTLLEPFLGTVEEMLAPNGRLLLCHVPRAGVTYDIVEDAFTRNRLAFTVVDGSKDKMEINGGRDDVGGVELCMDDARRARLYSV 1090
            E+EY +  + +   L +++  +   +L   L ML ++     EISGQR+W GS LL   +            +  +L +  K  LELGAGTGLVS++A+  G      TDGD   V  + + N++ N  P++    ++L WGD+ S+  F           +R F D+L                                                                               FD ++AGDVLYK  L+   L TV+E L P G  +LCH+PRA V++++++   T +   +T++     +     GR      +  MDD ++A++Y +
Sbjct:    9 EVEYALSTIRIGTTLTFEIRQMEELSLAASLSMLTEMTETTSEISGQRIWPGSYLLAEFV-----------HEHPEL-VANKRVLELGAGTGLVSLVANLAGTRAAIATDGDMSVVTDILEWNVQHNAPPSSTIDTASLWWGDNSSSGEF-----------RRRFGDEL-------------------------------------------------------------------------------FDIVVAGDVLYKGELVPLLLTTVKEWLHPEGIFVLCHIPRADVSHEVLQRELTSHGFKWTLL-----QEAAQAGRLPE---DCSMDDVKKAKVYRI 242          
BLAST of mRNA_H-paniculata_contig494.12123.1 vs. uniprot
Match: A0A662WUX6_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WUX6_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 5.020e-17
Identity = 98/351 (27.92%), Postives = 135/351 (38.46%), Query Frame = 2
Query:   71 LEYDVQEVCLSKELVYKVTTVANEALP----LEMLLQLESRREEISGQRLWEGSLLLCAHLLKVCKAGGGSDEQSTQLDLRGKTALELGAGTGLVSMLAHGLGAALVAVTDGDERCVLMADKNMKENNIPAAAAFVSTLRWGDSGSTLAFCKTYKRWATAAQRVFADQLRKGHASAPNSKMEPTLTERLESEPGINGVADDVRARPMAPLAGQEDPTIIPEHIATVTXXXXXXXXXXXXRPALPPQGLFDFILAGDVLYKQTLLEPFLGTVEEMLAP---NGRLLLCHVPRAGVTYDIVEDAFTRNRLAFTVVDGSKDKMEINGGRDDVGGVELC-MDDARRARLYSVTRK 1099
            +EY+ + V +      +V     E LP    L ML ++++   EISG RLW GS  L  +L +  +             +RGK  LELGAGTG+ S++A  LGAA    TDGD   V +  KN++ N          +L WGD  ST                                       E L +E                          IP+  A                         D +LAGDVLYK+ LL     TV  +LA    N   +LCHVPRA VT+D+V+     + L F  V      +      D    +E C M+D  RA+LY +T++
Sbjct:   42 VEYETKRVAVGD---LEVQVFQMEELPVAASLFMLAEMDANAAEISGTRLWTGSHFLSRYLWRHPEL------------VRGKRVLELGAGTGICSIVAFKLGAARCLATDGDAEVVELLAKNVEVNGAVDVVT-ARSLFWGDEAST---------------------------------------ETLLAE--------------------------IPDAFAAT-----------------------DVVLAGDVLYKRELLPLLFATVTRVLASSDSNRAFVLCHVPRADVTHDVVQQQIEASGLQFEEV-----TLPAEDVVDATAELEECPMEDVGRAKLYYITKR 283          
BLAST of mRNA_H-paniculata_contig494.12123.1 vs. uniprot
Match: D0P1I8_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P1I8_PHYIT)

HSP 1 Score: 89.0 bits (219), Expect = 3.050e-16
Identity = 96/351 (27.35%), Postives = 134/351 (38.18%), Query Frame = 2
Query:   71 LEYDVQEVCLSKELVYKVTTVANEALP----LEMLLQLESRREEISGQRLWEGSLLLCAHLLKVCKAGGGSDEQSTQLDLRGKTALELGAGTGLVSMLAHGLGAALVAVTDGDERCVLMADKNMKENNIPAAAAFVSTLRWGDSGSTLAFCKTYKRWATAAQRVFADQLRKGHASAPNSKMEPTLTERLESEPGINGVADDVRARPMAPLAGQEDPTIIPEHIATVTXXXXXXXXXXXXRPALPPQGLFDFILAGDVLYKQTLLEPFLGTVEEMLAPNGRL----LLCHVPRAGVTYDIVEDAFTRNRLAFTVVDGSKDKMEINGGRDDVGGVELC-MDDARRARLYSVTR 1096
            +EY+ + V +      +V     E LP    L ML ++++   EISG RLW GS  L  +L +  +             +RGK  LELGAGTG+ S+++  LGA     TDGDE  V +  KN++ N          +L WGD                                      EP+    L+  PG      DV                                               D +LAGDVLYK  LL     TV  +LA +  +    +LCH+PRA VT+D+V+     + L F  V     K+      D    +E C ++D  RARLY +TR
Sbjct:   22 VEYETKRVVVGD---LEVQVFQMEELPVAASLFMLAEMDANVTEISGTRLWTGSHFLSRYLWRHPEL------------VRGKRVLELGAGTGICSIVSSKLGAVKCLATDGDEEVVELLAKNVQVNEAEDVVT-ARSLFWGD--------------------------------------EPSAQTLLKEFPGA---LTDV-----------------------------------------------DVVLAGDVLYKSELLPLLFATVTRVLASDDDVERAFVLCHIPRAEVTHDLVQKQIINSGLNFEKV-----KLPAEDVADAAAELEECPVEDVERARLYYITR 263          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig494.12123.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGH3_ECTSI8.850e-6741.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YP02_9STRA3.740e-2832.56Putative methyltransferase-domain-containing prote... [more]
A0A7S2XZT6_9STRA3.630e-2529.01Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8J2SGM5_9STRA4.560e-2329.21Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
A0A1V9ZFX3_9STRA3.080e-2025.79Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A1V9YS28_9STRA2.640e-1926.74Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A067BSN2_SAPPC1.250e-1826.45Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A6G0WHQ3_9STRA4.870e-1724.71Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A662WUX6_9STRA5.020e-1727.92Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]
D0P1I8_PHYIT3.050e-1627.35Uncharacterized protein n=1 Tax=Phytophthora infes... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig494contigH-paniculata_contig494:31668..36219 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score96.7
Seed ortholog evalue2.3e-17
Seed eggNOG ortholog112098.XP_008609916.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.peptidase activity, acting on L-amino acid peptides
EggNOG OGsCOG3897@1,KOG2920@2759
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-16_004030.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1437
Cds size1053
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig494.12123.1prot_H-paniculata_contig494.12123.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig494 31720..35887 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930458.4006205-UTR-H-paniculata_contig494:31667..317191622930458.4006205-UTR-H-paniculata_contig494:31667..31719Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig494 31668..31719 +
1691481300.9480128-UTR-H-paniculata_contig494:31667..317191691481300.9480128-UTR-H-paniculata_contig494:31667..31719Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig494 31668..31719 +
1622930458.4915042-UTR-H-paniculata_contig494:35887..362191622930458.4915042-UTR-H-paniculata_contig494:35887..36219Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig494 35888..36219 +
1691481300.9870908-UTR-H-paniculata_contig494:35887..362191691481300.9870908-UTR-H-paniculata_contig494:35887..36219Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig494 35888..36219 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930458.417163-CDS-H-paniculata_contig494:31719..318501622930458.417163-CDS-H-paniculata_contig494:31719..31850Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig494 31720..31850 +
1691481300.9572403-CDS-H-paniculata_contig494:31719..318501691481300.9572403-CDS-H-paniculata_contig494:31719..31850Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig494 31720..31850 +
1622930458.4346123-CDS-H-paniculata_contig494:32962..331811622930458.4346123-CDS-H-paniculata_contig494:32962..33181Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig494 32963..33181 +
1691481300.9646606-CDS-H-paniculata_contig494:32962..331811691481300.9646606-CDS-H-paniculata_contig494:32962..33181Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig494 32963..33181 +
1622930458.4505124-CDS-H-paniculata_contig494:33541..336161622930458.4505124-CDS-H-paniculata_contig494:33541..33616Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig494 33542..33616 +
1691481300.9721332-CDS-H-paniculata_contig494:33541..336161691481300.9721332-CDS-H-paniculata_contig494:33541..33616Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig494 33542..33616 +
1622930458.469147-CDS-H-paniculata_contig494:35259..358871622930458.469147-CDS-H-paniculata_contig494:35259..35887Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig494 35260..35887 +
1691481300.979544-CDS-H-paniculata_contig494:35259..358871691481300.979544-CDS-H-paniculata_contig494:35259..35887Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig494 35260..35887 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig494.12123.1

>prot_H-paniculata_contig494.12123.1 ID=prot_H-paniculata_contig494.12123.1|Name=mRNA_H-paniculata_contig494.12123.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=351bp
MGDEFELEYDVQEVCLSKELVYKVTTVANEALPLEMLLQLESRREEISGQ
RLWEGSLLLCAHLLKVCKAGGGSDEQSTQLDLRGKTALELGAGTGLVSML
AHGLGAALVAVTDGDERCVLMADKNMKENNIPAAAAFVSTLRWGDSGSTL
AFCKTYKRWATAAQRVFADQLRKGHASAPNSKMEPTLTERLESEPGINGV
ADDVRARPMAPLAGQEDPTIIPEHIATVTPDKMRNVLPREKRPALPPQGL
FDFILAGDVLYKQTLLEPFLGTVEEMLAPNGRLLLCHVPRAGVTYDIVED
AFTRNRLAFTVVDGSKDKMEINGGRDDVGGVELCMDDARRARLYSVTRKS
*
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mRNA from alignment at H-paniculata_contig494:31668..36219+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig494.12123.1 ID=mRNA_H-paniculata_contig494.12123.1|Name=mRNA_H-paniculata_contig494.12123.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4552bp|location=Sequence derived from alignment at H-paniculata_contig494:31668..36219+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCTAACCTCGAAAAGCAACCACAGACACCCTAATATTGCGGAACAGAAG CTATGGGGGATGAATTCGAGCTAGAGTACGACGTGCAAGAGGTGTGCCTG TCGAAGGAGCTGGTATATAAAGTTACTACCGTTGCGAACGAAGCCTTGCC TTTGGAGATGTTGCTGCAGCTTGAGAGTCGAAGGTGCAGACGGAACATAC TGGTGGTATTGACCATAGTTGTCGCTAGATACCACACGTATTTCGCTGCG TGTAGCCATGTCCCTTCTCTCACCTCCAGTTGTCGTGCACCTTGTGGAGT GCTGCAGGAAAAATATAGTACATAAATGTGTAGTAAATGGTGTGAAGCTT TGCTAAACTCAGTTATGGTAAAACTGCCCGCTTTTGTCTGTGAGTGTTAT TTGCGCAACTTTCGAATAACAGGCTTCATGAAACCACACCCAGAGTGTGA GCCTCGGCTGAACTGACTCTACTCTCCGTCTACGATGATAATTTGATTAT CTAATCTACAAGTTTGTTTCTTGTGCAGGATCTTCAAGGAAGACTGGCTA CGTTTTTCGCTTTCCTCGTGTGTGCGTACTTTGACGTGCCCATCTTCCCC TTAGTCTACAATTTTAAAAGAAAATACAAACGCCATCCAGCTAACGTGTG ATCCTTTACACGCCAGAGTGTAGACCCTCTTTATCTACCACTCGGAAGCG TTGTGAGGGAAGGAGCTTAAGCCCACGGCAAGATAACAAGTACCAAGCCC CGATTTCCGAATCCCCGCAAAACGCGGGGAATAATATCGTATCGGTGTAA CGTGTGATCAATCAGAATTCAGAGTTGTCATTTTTTTTTTTTTTAACCCC TGGAAGCCTTAGGCAAAAACCTTTATCCGATGCTTCCATACCTGAGTATT TTACCAAAGTATTTCTACAGTTTCTTCTGCGGGGTAGGCGCCACCCACTA AAAGACCTTTGACTAGACTTCCAGTCATGCTCAGTTCACGAGCTACCCTA CCCGTTCGGGCGTAGGTCCGTGAGTTGCCAATCTTCATCTACTATTCGGC CGGTAGTAAATAACAATTTATCATAAATGTAATACTCAGCTCTGCTCAAG TCGTTGTGTTTCAAGTTTAAACAAGAATGGTGCCAATGGTGTCTTTGCTT TCCTCATTCAGCTTTCTTCATGGAGTAAGGGTTTGAATGTTGCCCTCACA GTTCACAACATGAAGTTTTGCCTCTGACTGTCACCTATCTGAAGTTTTTT TGTCGCGTGGTCGCATTTGTTACAATCTCGTTTTTTCACTGAAAGAGAGG AAATCAGCGGGCAGAGGCTGTGGGAAGGGTCGCTCCTGCTCTGCGCGCAT CTACTGAAGGTTTGCAAGGCCGGTGGGGGCAGCGATGAGCAATCAACACA GCTGGACTTGCGAGGGAAGACTGCGCTGGAGCTAGGCGCGGGAACCGGTC TTGTGAGCATGTTGGCGCACGGTCTAGGGGCGGCGTTAGTTGCCGTTACG GACGGAGACGAAAGGTAACAATGTGACCATGCCATGACGTTGTACTGCCT GTACAGAATAGGGCACACGGTAGTTTGGAGTATTTAAGAGACCACAGAGC AGCATGGATTCGAGAATAGCATCTTCTGACACTCAGAGCTGAAGATTGCC GATCCGCAGGCACAGGTCGGAACAAGGGATGTTGAGAAGGGAGGGCACGG GAAAAGCGATTCCGCCCCAATGACGAGTAGATTAGCGTTAACATACAGAG GAAATTTTCCGCGGAGACGGCCCAATTCTACGCTCGCGAACAATGCAATC TTCATTTTAATTCCTAATCCTTCAAAATTGGACTGCTGCACGCCCCCCTT TCGTGTGGGTTGCGCATTTGTTAGGTGTGTCTTGATGGCCGACAAGAACA TGAAAGAGAATAACATCCCTGCCGCGGCGGCCTTCGTCTCCACCCTGCGG TGAGCCCCAACGAATGAATGGTTTCGGCGAGTCAGTATCTCATCGTCATG GGTAACCCGTCATCTAATTTCGATTACCCAGGCTTGCGTCGCTGTTCTAG GCTCTGACGAACAACACGACTTTCGCTAGGTACAATGGATGCACTGTGTG TTGGAAACGAGCTTCGCCTGCCAGTCCGCATTATGCAACTTAATGGAGTT AGAAGACTAAAGTATGCTCTTTTCTGAGCAACCCAAATTCGCTACAGACA AGGAAAATGCTCGGACACATGTCTTCGTCAGCAACCAAGCACAAAGGTTA GCCACATTAATCTACAACGGTGATTATTGCATCGATATTACAGTACACTG CACTTCAATCGCTCTGAAGACAGTATTGTGGGGATGTTTGTTTTTTTTAA CCCCCGGAAGGCTGAGGTAAAAACCTTTTCCGCTGCTTCCACATCCAGGC ATTCGCCCAAACATGTCTACATTTCCTTTTGTGGGGATGTAGGCACCGGA CGAGTCTAAGCCTTCGGGTAGGGCACGGCTAGAGGGTAACCTTTGCCGAT GAACGGACAGGAGTTGAGATTAAGGGTCTTAACGTGTGAGGATTCTGTAC TTTGCGGGTGCAGTCTAAAATCGTATGCTAAAACGGCCAAGTCACGTACA ACCCAGAGACCGAAGGCGGTCCTGGACGGCTATCCCACAATATACCCAAG GTTTGAGCTTAACTGAAGGTTTGACCGACAAGACTATACTCCATGCGTTT TGCATGGGTCTGGAATCGGAACACGGTAAAAAGTGTTGTGTGCTCAAGCT TCTTCCCTCTCGATTCTGGTGATACATGATATATTTTTTTAATATTTGGG GTAGAAAAAAAAGAAAATGTAGGCACCGATGGTTTAACCTTGCACACACC TTGTTGTCAAGAAAACTGTATTTGTACTGTTCACGTGGAAAGACCGACGC ACGTTTAGATAAAACTCTCAACTTTCGAAGCTCATTGCATGTAGGTGATG CTCGATACAGGTTCAGACGGAAACACAACGTTTATGGCAAAAGCGACCCA ACCGCATCTCTCAGTTTAGGCACTTTGGCCGTAAACCACGACTGAGCTTC CTGACCATTATTAATCAAATGAAGCCCTCAACGCGTACATACTGTACTAT CATCCATTTTCGCGGTTACTGACAGTGGGTCTGAGGGATGCACATGACGC AATCTATCGTACCACATGCAGATTGCTGGTTGTTGCACACTCAGCTTGTC TAACAAAATTCCGCAAGGGGTCAGACTCTCTTCATGAGCCTGATGACACT AAGACCACGCAGACGGGCAGGGAGATTGGGCCCAGTGGCAAAACGTGTGA TGAGCTACCGACAAAAAACAGAAGAAAAGGCGTTCAAGCCTGTTCAGGCC CCTCAAAACATGGGCGGGCGAAGGGGGGGGAAGGTTAGGTGCCTAGTGCC TAGACTGGGAGTGCCCTCTCTCGGACTAAAGTACGACATGCAGCTTGTAC TCCAACAAGGACGTGTACCATTATTTTCAGTATTCATCGGAAGCGGGAAA GGGTGCGCTTCAGATCGCTTTATTTTGTCCTGTGCCCTCCTCGCCTCTCA CGTCTTACCGATCCATCGCTCATGTTCACGCTCGATTGTCAGATGGGGCG ATTCCGGTTCCACATTGGCCTTCTGCAAGACGTATAAAAGATGGGCAACA GCGGCGCAGCGAGTTTTTGCCGACCAACTTCGCAAAGGGCATGCTTCTGC CCCAAATTCGAAAATGGAGCCAACCCTGACGGAGCGACTCGAGTCAGAGC CAGGCATAAATGGGGTAGCAGACGATGTCCGTGCACGGCCCATGGCACCT CTCGCAGGCCAAGAGGATCCCACTATTATACCAGAACACATTGCAACTGT TACCCCAGACAAAATGCGAAATGTACTGCCACGAGAGAAACGACCAGCGT TACCACCCCAAGGCCTGTTTGATTTCATTCTCGCGGGAGACGTTCTTTAC AAGCAGACCCTTCTGGAACCTTTCCTTGGCACGGTCGAGGAGATGCTGGC GCCAAATGGGCGCTTGCTCTTGTGCCATGTACCCAGGGCAGGTGTTACTT ATGATATAGTAGAAGATGCCTTCACCCGCAACAGGCTTGCATTTACAGTC GTAGATGGCAGTAAGGATAAAATGGAGATAAACGGGGGCCGGGATGACGT TGGCGGAGTCGAGTTGTGCATGGATGACGCGCGGCGAGCGCGACTTTACT CTGTGACGAGGAAATCTTAACAAGTTTCATGCGTGTTATATAACCTCCAA CATGTTGCTGTGTGGATGCTCAAAGTTGTGTTAATGGGTTGCGAAGAAGT ATGCAAGTCTTGATATGTTTCCTTGAAGTCTTGACATGTTCGCCTGCTGC AGGGTATCCATTGCGGAGTGGAGATAAGTTGTCAGATATTCTTGTTAGTT ACGTTTTTGTCGCCACGGAGTTGCGATGGCCAGCCACCGGATGTTGTTGT GGCGCTTCAGACAGTCACAAGCGTTCACCGTTGACTCGAGGTCTATTTTT CAAATACGATGGTTGTAGAAGACAAAATTTCAAATCCAAAATCGGAAGGC CG
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Coding sequence (CDS) from alignment at H-paniculata_contig494:31668..36219+

>mRNA_H-paniculata_contig494.12123.1 ID=mRNA_H-paniculata_contig494.12123.1|Name=mRNA_H-paniculata_contig494.12123.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2106bp|location=Sequence derived from alignment at H-paniculata_contig494:31668..36219+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGGATGAATTCGAGCTAGAGTACGACGTGCAAGAGGTGTGCCTGTC
GAAGGAGCTGGTATATAAAGTTACTACCGTTGCGAACGAAGCCTTGCCTT
TGGAGATGTTGCTGCAGCTTGAGAGTCGAAGATGGGGGATGAATTCGAGC
TAGAGTACGACGTGCAAGAGGTGTGCCTGTCGAAGGAGCTGGTATATAAA
GTTACTACCGTTGCGAACGAAGCCTTGCCTTTGGAGATGTTGCTGCAGCT
TGAGAGTCGAAGAGAGGAAATCAGCGGGCAGAGGCTGTGGGAAGGGTCGC
TCCTGCTCTGCGCGCATCTACTGAAGGTTTGCAAGGCCGGTGGGGGCAGC
GATGAGCAATCAACACAGCTGGACTTGCGAGGGAAGACTGCGCTGGAGCT
AGGCGCGGGAACCGGTCTTGTGAGCATGTTGGCGCACGGTCTAGGGGCGG
CGTTAGTTGCCGTTACGGACGGAGACGAAAGAGAGGAAATCAGCGGGCAG
AGGCTGTGGGAAGGGTCGCTCCTGCTCTGCGCGCATCTACTGAAGGTTTG
CAAGGCCGGTGGGGGCAGCGATGAGCAATCAACACAGCTGGACTTGCGAG
GGAAGACTGCGCTGGAGCTAGGCGCGGGAACCGGTCTTGTGAGCATGTTG
GCGCACGGTCTAGGGGCGGCGTTAGTTGCCGTTACGGACGGAGACGAAAG
GTGTGTCTTGATGGCCGACAAGAACATGAAAGAGAATAACATCCCTGCCG
CGGCGGCCTTCGTCTCCACCCTGCGGTGTGTCTTGATGGCCGACAAGAAC
ATGAAAGAGAATAACATCCCTGCCGCGGCGGCCTTCGTCTCCACCCTGCG
ATGGGGCGATTCCGGTTCCACATTGGCCTTCTGCAAGACGTATAAAAGAT
GGGCAACAGCGGCGCAGCGAGTTTTTGCCGACCAACTTCGCAAAGGGCAT
GCTTCTGCCCCAAATTCGAAAATGGAGCCAACCCTGACGGAGCGACTCGA
GTCAGAGCCAGGCATAAATGGGGTAGCAGACGATGTCCGTGCACGGCCCA
TGGCACCTCTCGCAGGCCAAGAGGATCCCACTATTATACCAGAACACATT
GCAACTGTTACCCCAGACAAAATGCGAAATGTACTGCCACGAGAGAAACG
ACCAGCGTTACCACCCCAAGGCCTGTTTGATTTCATTCTCGCGGGAGACG
TTCTTTACAAGCAGACCCTTCTGGAACCTTTCCTTGGCACGGTCGAGGAG
ATGCTGGCGCCAAATGGGCGCTTGCTCTTGTGCCATGTACCCAGGGCAGG
TGTTACTTATGATATAGTAGAAGATGCCTTCACCCGCAACAGGCTTGCAT
TTACAGTCGTAGATGGCAGTAAGGATAAAATGGAGATAAACGGGGGCCGG
GATGACGTTGGCGGAGTCGAGTTGTGCATGGATGACGCGCGGCGAGCGCG
ACTTTACTCTGTGACGAGGAAATCTTAAATGGGGCGATTCCGGTTCCACA
TTGGCCTTCTGCAAGACGTATAAAAGATGGGCAACAGCGGCGCAGCGAGT
TTTTGCCGACCAACTTCGCAAAGGGCATGCTTCTGCCCCAAATTCGAAAA
TGGAGCCAACCCTGACGGAGCGACTCGAGTCAGAGCCAGGCATAAATGGG
GTAGCAGACGATGTCCGTGCACGGCCCATGGCACCTCTCGCAGGCCAAGA
GGATCCCACTATTATACCAGAACACATTGCAACTGTTACCCCAGACAAAA
TGCGAAATGTACTGCCACGAGAGAAACGACCAGCGTTACCACCCCAAGGC
CTGTTTGATTTCATTCTCGCGGGAGACGTTCTTTACAAGCAGACCCTTCT
GGAACCTTTCCTTGGCACGGTCGAGGAGATGCTGGCGCCAAATGGGCGCT
TGCTCTTGTGCCATGTACCCAGGGCAGGTGTTACTTATGATATAGTAGAA
GATGCCTTCACCCGCAACAGGCTTGCATTTACAGTCGTAGATGGCAGTAA
GGATAAAATGGAGATAAACGGGGGCCGGGATGACGTTGGCGGAGTCGAGT
TGTGCATGGATGACGCGCGGCGAGCGCGACTTTACTCTGTGACGAGGAAA
TCTTAA
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