mRNA_H-paniculata_contig494.12123.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig494.12123.1 vs. uniprot
Match: D8LGH3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGH3_ECTSI) HSP 1 Score: 227 bits (579), Expect = 8.850e-67 Identity = 145/346 (41.91%), Postives = 191/346 (55.20%), Query Frame = 2
Query: 179 RREEISGQRLWEGSLLLCAHLLKVCKAGGGSDEQST--------QLDLRGKTALELGAGTGLVSMLAHGLGAALVAVTDGDERCVLMADKNMKENNIPAAAAFVSTLRWGDSGSTLAFCKTYKRWATAAQRVFADQLRKGHASA--PNSKMEPTLTERLESEPGINGVADDVRARPMAPLAGQEDPTIIPEHIAT-VTXXXXXXXXXXXXRPALP----PQGLFDFILAGDVLYKQTLLEPFLGTVEEMLAPNGRLLLCHVPRAGVTYDIVEDAFTRNRLAFTVVDGSKDKMEING--------GRD-------------------DVGGVELCMDDARRARLYSV 1090
+ EEISGQRLWEGSLLLCA+L++VC+ + +LDL+GK+ LELGAGTG+V MLA LGA + +TDGD++CV MA KN+++N++P A V+ LRWG+ ST FCK + W + + G ASA P + ++ S PG V A +P A + + + +T R +LP P FDFILAGDVLYK +LLEPFL TV +MLA GR+LLCH+PRAGVTYDIVE AF + AF +++G + G G+D DVGG+ELC+DDARRARLY +
Sbjct: 3 KSEEISGQRLWEGSLLLCAYLVEVCRNEDSNSSAGDCCRGMGKPKLDLQGKSVLELGAGTGIVGMLAAKLGAQTLILTDGDDKCVAMAQKNIQDNDVPFDQALVTALRWGEEESTTKFCKDFSEWDSRRVIGTGSGGKNGVASAAGPTKSLAAGAQDKA-SVPGDVAVC----AHGHSPNASSGNGHLNEDPASTSCEGQDRNVGPPPPPRDSLPSSPSPLKSFDFILAGDVLYKHSLLEPFLRTVRDMLAAGGRMLLCHIPRAGVTYDIVERAFAQAGFAFEILNGDNKEEGSKGHSSGGEGGGKDVGRADAPTEGAAGGHCDAPDVGGIELCVDDARRARLYEL 343
BLAST of mRNA_H-paniculata_contig494.12123.1 vs. uniprot
Match: A0A835YP02_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP02_9STRA) HSP 1 Score: 124 bits (312), Expect = 3.740e-28 Identity = 126/387 (32.56%), Postives = 176/387 (45.48%), Query Frame = 2
Query: 59 DEFELEYDVQEVCLSKE-----LVYKVTTVANEALPLEMLLQLESRREEISGQRLWEGSLLLCAHLLKVCKAGGGSDEQSTQLDLRGKTALELGAGTGLVSMLAHGLGAALVAVTDGDERCVLMADKNMKENNIPAAAAFVSTLRWGDSGSTLAFCKTYKRWATAAQRVF--------------------ADQLRKGHASA--PNSKMEPTLTER--LESEPGIN-------------GVADDVRARPMAPLAGQEDPTIIPEHIATVTXXXXXXXXXXXXRPALPPQGLFDFILAGDVLYKQTLLEPFLGTVEEMLAPNGR-LLLCHVPRAGVTYDIVEDAFTRNRLAFTVVDGSKDKMEINGGRDDVGGVELCMDDARRARLYSV 1090
DE +LEY+ Q V + E + KVT++ANEALPLEMLL LE+R+ EISGQRLWEGSLLLC H++ + GK LELGAG G+V + LGAA V +TDGD +C+ + +N+ NN+ A A + L+WG++ + A + A ++ QL G A+A P + P+ ++ SE G++ VA V +A L + + A+ XXXXXXXXXXXX PA G + + R LLLCH+PRAGV + V A L G++ G V G +C DD RA++Y++
Sbjct: 4 DESDLEYEEQTVTVGSEASGRQMTLKVTSLANEALPLEMLLALEARKHEISGQRLWEGSLLLCNHVIAHFAHA-----------IVGKRVLELGAGCGIVGLTCAKLGAAEVYITDGDAKCLPLIGQNITANNLSAVAK-AAVLKWGNAAALAALSPLPFDFVVAGDVLYKKELVAPLLSTVRAALRWPPCSQLGLGLAAAGAPGGRQVPSASDSRVASSESGVSTSGXXXXXXXXXXXVATGVAGADVATLRAADKQDSLEAAGASAAXXXXXXXXXXXXXPAA-------------------------GATRQRHGSSDRGLLLCHIPRAGVEHCQVAAAL--RELRAPPGGGARSLAVSAGDGGGVAGTAVCDDDVARAQVYAL 351
BLAST of mRNA_H-paniculata_contig494.12123.1 vs. uniprot
Match: A0A7S2XZT6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZT6_9STRA) HSP 1 Score: 113 bits (282), Expect = 3.630e-25 Identity = 94/324 (29.01%), Postives = 136/324 (41.98%), Query Frame = 2
Query: 146 LPLEMLLQLESRREEISGQRLWEGSLLLCAHLLKVCKAGGGSDEQSTQLDLRGKTALELGAGTGLVSMLAHGLGAALVAVTDGDERCVLMADKNMKENNIPAAAAFVSTLRWGDSGSTLAFCKTYKRWATAAQRVFADQLRKGHASAPNSKMEPTLTERLESEPGINGVADDVRARPMAPLAGQEDPTIIPEHIATVTXXXXXXXXXXXXRPALPPQGLFDFILAGDVLYKQTLLEPFLGTVEEMLAP--------NGRLLLCHVPRAGVTYDIVEDAFTRNRLAFTVVDGSKDKMEINGGRDDVGGVELCMDDARRARLYSVT 1093
LPLE+L LESR++EISG+RLW GS +L ++ + +A L GK +ELGAGTG+ MLA LGA V +TDGD+ CV +N+++N++ + + L WGD S +F + +AG PP FD ++AGDVLYK +L +PF T ++L+ +G LLLCH+PRAGV + V+ + FTV K E++ V +E DD +RA +Y +T
Sbjct: 3 LPLEVLADLESRKDEISGRRLWSGSTILAHFMINISEATA----IGRSLSFSGKNVVELGAGTGVCGMLARYLGAQKVLITDGDKECVNFIKENLQDNSMDDGSCTAAHLFWGDRESMASFQE---------------------------------------------------------VAG-------------------------------PPP--FDVVIAGDVLYKHSLCQPFFETARQLLSSPTDENRDGDGFLLLCHIPRAGVEQEEVQAI--AEQTGFTV-----SKQELDQSALSVDSIEN--DDLQRAAVYMMT 223
BLAST of mRNA_H-paniculata_contig494.12123.1 vs. uniprot
Match: A0A8J2SGM5_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGM5_9STRA) HSP 1 Score: 109 bits (273), Expect = 4.560e-23 Identity = 92/315 (29.21%), Postives = 120/315 (38.10%), Query Frame = 2
Query: 146 LPLEMLLQLESRREEISGQRLWEGSLLLCAHLLKVCKAGGGSDEQSTQLDLRGKTALELGAGTGLVSMLAHGLGAALVAVTDGDERCVLMADKNMKENNIPAAAAFVSTLRWGDSGSTLAFCKTYKRWATAAQRVFADQLRKGHASAPNSKMEPTLTERLESEPGINGVADDVRARPMAPLAGQEDPTIIPEHIATVTXXXXXXXXXXXXRPALPPQGLFDFILAGDVLYKQTLLEPFLGTVEEMLAPNGRLLLCHVPRAGVTYDIVEDAFTRNRLAFTVVDGSKDKMEINGGRDDVGGVELCMDDARRARLYSV 1090
LPLE L LES+R+EISGQR W GSLLL A + S + D + +ELGAG GL +M+A GA + A TDGD+RC+ + +N+ N + VS WG PP G D +LAGDVLYK+ L+EPFL +E LAP GR LLCH+PRAGV++++VE A A G + G + DDA AR+Y +
Sbjct: 34 LPLETLFALESKRDEISGQRAWPGSLLLAAEI---------SARPALVAD---RAVVELGAGAGLCAMVAARCGARMTAATDGDDRCLDLLTRNVAANGLDGVVT-VSKCFWGRDA--------------------------------------------------------------------------------------------------PPVG--DLVLAGDVLYKRALVEPFLDALEAALAPGGRALLCHLPRAGVSHEVVEAALRAREAA-----GGPALAAVRAPASAEFGDDCTADDAAAARVYEL 230
BLAST of mRNA_H-paniculata_contig494.12123.1 vs. uniprot
Match: A0A1V9ZFX3_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZFX3_9STRA) HSP 1 Score: 100 bits (248), Expect = 3.080e-20 Identity = 90/349 (25.79%), Postives = 140/349 (40.11%), Query Frame = 2
Query: 71 LEYDVQEVCLSKELVYKVTTVANEALP--LEMLLQLESRREEISGQRLWEGSLLLCAHLLKVCKAGGGSDEQSTQLDLRGKTALELGAGTGLVSMLAHGLGAALVAVTDGDERCVL------MADKNMKENNIPAAAAFVSTLRWGDSGSTLAFCKTYKRWATAAQRVFADQLRKGHASAPNSKMEPTLTERLESEPGINGVADDVRARPMAPLAGQEDPTIIPEHIATVTXXXXXXXXXXXXRPALPPQGLFDFILAGDVLYKQTLLEPFLGTVEEMLAPNGRLLLCHVPRAGVTYDIVEDAFTRNRLAFTVVDGSKDKMEINGGRDDVGGVELCMDDARRARLYSVT 1093
+EY + + + +L +++ + +L ML ++++ EISGQR+W GS LL ++ + + + K LELGAGTGLVS++A GA V TDGD V +A+ + N+ AA+ F WG+S S+ AF + + + LFD I+AGDVLYK L+ L +V+E L PNG +LCH+PRA V++++++ A T +AF + + M N D +DDA+RA LY +T
Sbjct: 15 VEYGLSTIAIGTDLRFRIRQMEELSLAASFSMLSEMKATSSEISGQRIWPGSYLLAEYV------------HANKDLVANKRVLELGAGTGLVSLVAQIAGATNVVATDGDVEVVKEILAWNIANNAKADGNVKAASLF-----WGNSTSSAAFQEQFGK------------------------------------------------------------------------------------------DLFDVIVAGDVLYKGELIPLLLASVKEWLQPNGIFVLCHIPRADVSHEVLQKALTEQNMAFAI---TTKLMRTNLPED------CTVDDAKRALLYHIT 247
BLAST of mRNA_H-paniculata_contig494.12123.1 vs. uniprot
Match: A0A1V9YS28_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YS28_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 2.640e-19 Identity = 92/344 (26.74%), Postives = 138/344 (40.12%), Query Frame = 2
Query: 71 LEYDVQEVCLSKELVYKVTTVANEALP--LEMLLQLESRREEISGQRLWEGSLLLCAHLLKVCKAGGGSDEQSTQLDLRGKTALELGAGTGLVSMLAHGLGAALVAVTDGDERCVL-MADKNMKENNIPAAAAFVSTLRWGDSGSTLAFCKTYKRWATAAQRVFADQLRKGHASAPNSKMEPTLTERLESEPGINGVADDVRARPMAPLAGQEDPTIIPEHIATVTXXXXXXXXXXXXRPALPPQGLFDFILAGDVLYKQTLLEPFLGTVEEMLAPNGRLLLCHVPRAGVTYDIVEDAFTRNRLAFTVVDGSKDKMEINGGRDDVGGVELCMDDARRARLYSVT 1093
+EY + + + +L +++ + +L ML ++ + EISGQR+W GS LL +L + + + GK LELGAGTGLVS++A GAA + TDGD V + N++ N A ++L WGD S AF + + G A LFD +LAGDVLYK L+ L +V+ L +G LLCH+PRA V++D+++ A + AF G K+ + DD +DDA+RA LY++T
Sbjct: 16 VEYGLSTIRIGSDLRFRIRQMEELSLAASFSMLSEMTATSSEISGQRIWPGSYLLAEYL------------HANKDLVAGKRTLELGAGTGLVSLVARLDGAASLVATDGDLEVVNDILTWNVQTNAPDATNLHTTSLWWGDEASNTAFAERF-----------------GSA-------------------------------------------------------------------------LFDRVLAGDVLYKGELVPLLLASVKTWLKSDGTFLLCHIPRADVSHDVLQSALAAHGFAF----GITTKLARDNLPDD-----CAVDDAKRALLYTIT 248
BLAST of mRNA_H-paniculata_contig494.12123.1 vs. uniprot
Match: A0A067BSN2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BSN2_SAPPC) HSP 1 Score: 95.5 bits (236), Expect = 1.250e-18 Identity = 91/344 (26.45%), Postives = 141/344 (40.99%), Query Frame = 2
Query: 71 LEYDVQEVCLSKELVYKVTTVANEALP--LEMLLQLESRREEISGQRLWEGSLLLCAHLLKVCKAGGGSDEQSTQLDL-RGKTALELGAGTGLVSMLAHGLGAALVAVTDGDERCVL-MADKNMKENNIPAAAAFVSTLRWGDSGSTLAFCKTYKRWATAAQRVFADQLRKGHASAPNSKMEPTLTERLESEPGINGVADDVRARPMAPLAGQEDPTIIPEHIATVTXXXXXXXXXXXXRPALPPQGLFDFILAGDVLYKQTLLEPFLGTVEEMLAPNGRLLLCHVPRAGVTYDIVEDAFTRNRLAFTVVDGSKDKMEINGGRDDVGGVELCMDDARRARLYSV 1090
+EY + + + ++L +++ + +L ML ++++ EISGQR+W GS LL +L +D+ K LELGAGTGL S+++ GA + TDGD V + N++ N A ++L WGD+ S +F A+R F D G FD ++AGDVLYK L++ L TV LAP+GR +LCH+PRA V++D+++ A T + FT + D+ + DD +DDA+RA LY +
Sbjct: 16 VEYGLSTIRIGRDLRFRIRQMEELSLAASFSMLSEMKATSSEISGQRIWPGSYLLAEYL-------------HAHVDIVAAKRVLELGAGTGLASLVSRLAGATDLVATDGDLEVVNDVLAWNVQSNAPDATNLHTASLWWGDAASNASF----------AER-FGD-------------------------------------------------------------------------------GRFDVLIAGDVLYKGELVQLLLSTVRTWLAPHGRFVLCHIPRADVSHDVLQAALTAHGFRFTTTT-TLDRANLP---DD-----CTVDDAKRAILYDI 247
BLAST of mRNA_H-paniculata_contig494.12123.1 vs. uniprot
Match: A0A6G0WHQ3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHQ3_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 4.870e-17 Identity = 85/344 (24.71%), Postives = 139/344 (40.41%), Query Frame = 2
Query: 68 ELEYDVQEVCLSKELVYKVTTVANEALP--LEMLLQLESRREEISGQRLWEGSLLLCAHLLKVCKAGGGSDEQSTQLDLRGKTALELGAGTGLVSMLAHGLGAALVAVTDGDERCVL-MADKNMKENNIPAAAAFVSTLRWGDSGSTLAFCKTYKRWATAAQRVFADQLRKGHASAPNSKMEPTLTERLESEPGINGVADDVRARPMAPLAGQEDPTIIPEHIATVTXXXXXXXXXXXXRPALPPQGLFDFILAGDVLYKQTLLEPFLGTVEEMLAPNGRLLLCHVPRAGVTYDIVEDAFTRNRLAFTVVDGSKDKMEINGGRDDVGGVELCMDDARRARLYSV 1090
E+EY + + + L +++ + +L L ML ++ EISGQR+W GS LL + + +L + K LELGAGTGLVS++A+ G TDGD V + + N++ N P++ ++L WGD+ S+ F +R F D+L FD ++AGDVLYK L+ L TV+E L P G +LCH+PRA V++++++ T + +T++ + GR + MDD ++A++Y +
Sbjct: 9 EVEYALSTIRIGTTLTFEIRQMEELSLAASLSMLTEMTETTSEISGQRIWPGSYLLAEFV-----------HEHPEL-VANKRVLELGAGTGLVSLVANLAGTRAAIATDGDMSVVTDILEWNVQHNAPPSSTIDTASLWWGDNSSSGEF-----------RRRFGDEL-------------------------------------------------------------------------------FDIVVAGDVLYKGELVPLLLTTVKEWLHPEGIFVLCHIPRADVSHEVLQRELTSHGFKWTLL-----QEAAQAGRLPE---DCSMDDVKKAKVYRI 242
BLAST of mRNA_H-paniculata_contig494.12123.1 vs. uniprot
Match: A0A662WUX6_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WUX6_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 5.020e-17 Identity = 98/351 (27.92%), Postives = 135/351 (38.46%), Query Frame = 2
Query: 71 LEYDVQEVCLSKELVYKVTTVANEALP----LEMLLQLESRREEISGQRLWEGSLLLCAHLLKVCKAGGGSDEQSTQLDLRGKTALELGAGTGLVSMLAHGLGAALVAVTDGDERCVLMADKNMKENNIPAAAAFVSTLRWGDSGSTLAFCKTYKRWATAAQRVFADQLRKGHASAPNSKMEPTLTERLESEPGINGVADDVRARPMAPLAGQEDPTIIPEHIATVTXXXXXXXXXXXXRPALPPQGLFDFILAGDVLYKQTLLEPFLGTVEEMLAP---NGRLLLCHVPRAGVTYDIVEDAFTRNRLAFTVVDGSKDKMEINGGRDDVGGVELC-MDDARRARLYSVTRK 1099
+EY+ + V + +V E LP L ML ++++ EISG RLW GS L +L + + +RGK LELGAGTG+ S++A LGAA TDGD V + KN++ N +L WGD ST E L +E IP+ A D +LAGDVLYK+ LL TV +LA N +LCHVPRA VT+D+V+ + L F V + D +E C M+D RA+LY +T++
Sbjct: 42 VEYETKRVAVGD---LEVQVFQMEELPVAASLFMLAEMDANAAEISGTRLWTGSHFLSRYLWRHPEL------------VRGKRVLELGAGTGICSIVAFKLGAARCLATDGDAEVVELLAKNVEVNGAVDVVT-ARSLFWGDEAST---------------------------------------ETLLAE--------------------------IPDAFAAT-----------------------DVVLAGDVLYKRELLPLLFATVTRVLASSDSNRAFVLCHVPRADVTHDVVQQQIEASGLQFEEV-----TLPAEDVVDATAELEECPMEDVGRAKLYYITKR 283
BLAST of mRNA_H-paniculata_contig494.12123.1 vs. uniprot
Match: D0P1I8_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P1I8_PHYIT) HSP 1 Score: 89.0 bits (219), Expect = 3.050e-16 Identity = 96/351 (27.35%), Postives = 134/351 (38.18%), Query Frame = 2
Query: 71 LEYDVQEVCLSKELVYKVTTVANEALP----LEMLLQLESRREEISGQRLWEGSLLLCAHLLKVCKAGGGSDEQSTQLDLRGKTALELGAGTGLVSMLAHGLGAALVAVTDGDERCVLMADKNMKENNIPAAAAFVSTLRWGDSGSTLAFCKTYKRWATAAQRVFADQLRKGHASAPNSKMEPTLTERLESEPGINGVADDVRARPMAPLAGQEDPTIIPEHIATVTXXXXXXXXXXXXRPALPPQGLFDFILAGDVLYKQTLLEPFLGTVEEMLAPNGRL----LLCHVPRAGVTYDIVEDAFTRNRLAFTVVDGSKDKMEINGGRDDVGGVELC-MDDARRARLYSVTR 1096
+EY+ + V + +V E LP L ML ++++ EISG RLW GS L +L + + +RGK LELGAGTG+ S+++ LGA TDGDE V + KN++ N +L WGD EP+ L+ PG DV D +LAGDVLYK LL TV +LA + + +LCH+PRA VT+D+V+ + L F V K+ D +E C ++D RARLY +TR
Sbjct: 22 VEYETKRVVVGD---LEVQVFQMEELPVAASLFMLAEMDANVTEISGTRLWTGSHFLSRYLWRHPEL------------VRGKRVLELGAGTGICSIVSSKLGAVKCLATDGDEEVVELLAKNVQVNEAEDVVT-ARSLFWGD--------------------------------------EPSAQTLLKEFPGA---LTDV-----------------------------------------------DVVLAGDVLYKSELLPLLFATVTRVLASDDDVERAFVLCHIPRAEVTHDLVQKQIINSGLNFEKV-----KLPAEDVADAAAELEECPVEDVERARLYYITR 263 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig494.12123.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig494.12123.1 >prot_H-paniculata_contig494.12123.1 ID=prot_H-paniculata_contig494.12123.1|Name=mRNA_H-paniculata_contig494.12123.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=351bp MGDEFELEYDVQEVCLSKELVYKVTTVANEALPLEMLLQLESRREEISGQback to top mRNA from alignment at H-paniculata_contig494:31668..36219+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig494.12123.1 ID=mRNA_H-paniculata_contig494.12123.1|Name=mRNA_H-paniculata_contig494.12123.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4552bp|location=Sequence derived from alignment at H-paniculata_contig494:31668..36219+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig494:31668..36219+ >mRNA_H-paniculata_contig494.12123.1 ID=mRNA_H-paniculata_contig494.12123.1|Name=mRNA_H-paniculata_contig494.12123.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2106bp|location=Sequence derived from alignment at H-paniculata_contig494:31668..36219+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |