mRNA_H-paniculata_contig49200.12095.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig49200.12095.1 vs. uniprot
Match: A0A6H5KUJ3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUJ3_9PHAE) HSP 1 Score: 190 bits (483), Expect = 7.680e-54 Identity = 122/358 (34.08%), Postives = 189/358 (52.79%), Query Frame = 1
Query: 1 LRQSPKTWHRTIDTDLRKIGFVATVSDLCVYVKGSSNN------YIHAYNIRQRSAHHRAQQYGRRQSPFYTQGQIHYDRLWRPDANSRDRH-----PQDKECGTISIGQHHCVVSLLNKFGMDDCNSVHTPGTGKELTVKPEGSVLLDEQGTINYQAIVGSLIFLT*SIRMDIGFAVSQAACFMPNLASVHMRSVKRILRYLKGAPNVKLDYSRDSNFELTGFCDASYGTGDPEKARSTSGSMYFLSGGVVHFSSSLQKITAQSTTEAELIAMSTCAKQGVYLSGILGELGWKNFRSVRIFCDNKGALLLAGQGNYGSRSKHLAFCFAGLRD*INQREIIIDHVSTKNELSDILTRF 1041
L QSP W+ T+D L G+ T SD CVYV + N Y+ I G Q + + DR D R +D E GT++I Q H V +LL +FGM + N V TPG G E++ +L NYQ++ GS+++L R D+ +A Q + N A V+M + K +LRYL+G P + + Y R F L F D+S+G +P+ RST+G ++FL+GG++ + + Q +TAQST EAE+ A+S A++ VY+S + EL +K F SV I D+ GAL +AG + R+ CF +R+ + + +I + H ++++L+DI T++
Sbjct: 12 LSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTTGNIIVILTVYVDDILIT-----------GGDQQLVDQKKKELTDRFEMTDMGEVKRILGIGVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTEKKNYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPGLPIVYKR-GQFRLAAFTDSSFGA-NPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTNVALRCFF-IRELVLRGQITLHHRPSEHQLADIATKY 355
BLAST of mRNA_H-paniculata_contig49200.12095.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE) HSP 1 Score: 192 bits (488), Expect = 6.660e-52 Identity = 120/353 (33.99%), Postives = 189/353 (53.54%), Query Frame = 1
Query: 1 LRQSPKTWHRTIDTDLRKIGFVATVSDLCVYVKGSSNN------YIHAYNIRQRSAHHRAQQYGRRQSPFYTQGQIHYDRLWRPDANSRDRHPQDKECGTISIGQHHCVVSLLNKFGMDDCNSVHTPGTGKELTVKPEGSVLLDEQGTINYQAIVGSLIFLT*SIRMDIGFAVSQAACFMPNLASVHMRSVKRILRYLKGAPNVKLDYSRDSNFELTGFCDASYGTGDPEKARSTSGSMYFLSGGVVHFSSSLQKITAQSTTEAELIAMSTCAKQGVYLSGILGELGWKNFRSVRIFCDNKGALLLAGQGNYGSRSKHLAFCFAGLRD*INQREIIIDHVSTKNELSDILTRF 1041
L QS W+ T+D L +G+ T SD CVYV S N Y+ I Q+ F R+ D +D E GT++I Q H V +LL +FGM + N V TPG G E++ +L YQ++ GS+++L R D+ +A Q + N A V+M + K +LRYL+G P + + Y R F L F D+S+G +P+ RST+G ++FL+GG++ + + Q +TAQST EAE+ A+S A++ VY+S + EL +K F SV I D+ GAL +AG + R+KH+A + +R+ + + +I + H ++++L+DI T++
Sbjct: 339 LSQSHALWNDTLDESLTVLGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQ------RDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMAGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKR-GQFRLAAFTDSSFGA-NPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKY 683
BLAST of mRNA_H-paniculata_contig49200.12095.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE) HSP 1 Score: 183 bits (464), Expect = 6.670e-52 Identity = 99/259 (38.22%), Postives = 152/259 (58.69%), Query Frame = 1
Query: 262 QDKECGTISIGQHHCVVSLLNKFGMDDCNSVHTPGTGKELTVKPEGSVLLDEQGTINYQAIVGSLIFLT*SIRMDIGFAVSQAACFMPNLASVHMRSVKRILRYLKGAPNVKLDYSRDSNFELTGFCDASYGTGDPEKARSTSGSMYFLSGGVVHFSSSLQKITAQSTTEAELIAMSTCAKQGVYLSGILGELGWKNFRSVRIFCDNKGALLLAGQGNYGSRSKHLAFCFAGLRD*INQREIIIDHVSTKNELSDILTR 1038
+D E GT++I Q +L ++GM+ N V TPG G EL+ + LL + +Q I GSL++L R D+ +AV Q N A VHM + K +LRYL+G P++ + Y + F L+ F D+S+G +P+ RST+G ++FL GG++ + + Q + AQ+T EAEL A+S A++ VY+S + E+G+K FRSV I D+ GAL +A + SR+KH+A F LR+ I + H + L+DI T+
Sbjct: 22 RDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEEKQRFQTITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKK-GQFRLSCFTDSSFGA-NPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATK 278
BLAST of mRNA_H-paniculata_contig49200.12095.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE) HSP 1 Score: 193 bits (491), Expect = 1.060e-51 Identity = 120/353 (33.99%), Postives = 188/353 (53.26%), Query Frame = 1
Query: 1 LRQSPKTWHRTIDTDLRKIGFVATVSDLCVYVKGSSNN------YIHAYNIRQRSAHHRAQQYGRRQSPFYTQGQIHYDRLWRPDANSRDRHPQDKECGTISIGQHHCVVSLLNKFGMDDCNSVHTPGTGKELTVKPEGSVLLDEQGTINYQAIVGSLIFLT*SIRMDIGFAVSQAACFMPNLASVHMRSVKRILRYLKGAPNVKLDYSRDSNFELTGFCDASYGTGDPEKARSTSGSMYFLSGGVVHFSSSLQKITAQSTTEAELIAMSTCAKQGVYLSGILGELGWKNFRSVRIFCDNKGALLLAGQGNYGSRSKHLAFCFAGLRD*INQREIIIDHVSTKNELSDILTRF 1041
L QSP W+ T+D L G+ T SD CVYV S N Y+ I Q+ F R+ D +D E GT++I Q H V +LL +FGM + N V TPG G E++ +L YQ++ GS+++L R D+ +A Q + N A V+M + K +LRYL+G P + + Y R F L F D+S+G +P+ RST+G ++FL+GG++ + + Q +TAQST EAE+ A+S A++ VY+S + EL +K F SV I D+ GAL +AG + R+KH+ + +R+ + + +I + H ++++L+DI T++
Sbjct: 495 LSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQ------RDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKR-GQFRLAAFTDSSFGA-NPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVTLRYFFIRELVLRGQITLHHRPSEHQLADIATKY 839
BLAST of mRNA_H-paniculata_contig49200.12095.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE) HSP 1 Score: 187 bits (475), Expect = 1.770e-51 Identity = 118/353 (33.43%), Postives = 187/353 (52.97%), Query Frame = 1
Query: 1 LRQSPKTWHRTIDTDLRKIGFVATVSDLCVYVKGSSNN------YIHAYNIRQRSAHHRAQQYGRRQSPFYTQGQIHYDRLWRPDANSRDRHPQDKECGTISIGQHHCVVSLLNKFGMDDCNSVHTPGTGKELTVKPEGSVLLDEQGTINYQAIVGSLIFLT*SIRMDIGFAVSQAACFMPNLASVHMRSVKRILRYLKGAPNVKLDYSRDSNFELTGFCDASYGTGDPEKARSTSGSMYFLSGGVVHFSSSLQKITAQSTTEAELIAMSTCAKQGVYLSGILGELGWKNFRSVRIFCDNKGALLLAGQGNYGSRSKHLAFCFAGLRD*INQREIIIDHVSTKNELSDILTRF 1041
L QSP W+ T+D L G+ T SD CVYV S N Y+ I Q+ F R+ D +D E GT++I Q H V + L +FGM + N V T G G E++ +L YQ++ GS+++L + D+ +A Q + N A V+M + K +LRYL+G P + + Y R F L F D+S+G +P+ RST+G ++FL+GG++ + + Q +TAQST EAE+ A+S A++ VY+S + EL +K F SV I D+ GAL +AG + R+KH+A + +R+ + + +I + H ++++L+DI T++
Sbjct: 131 LSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQ------RDYEQGTLAISQEHYVNTRLERFGMQEANPVSTLGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTQFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKR-GQFRLAAFTDSSFGA-NPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKY 475
BLAST of mRNA_H-paniculata_contig49200.12095.1 vs. uniprot
Match: A0A6H5J897_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J897_9PHAE) HSP 1 Score: 189 bits (481), Expect = 6.980e-51 Identity = 103/259 (39.77%), Postives = 165/259 (63.71%), Query Frame = 1
Query: 277 GTISIGQHHCVVSLLNKFGMDDCNSVHTPGTGKELTVKPEGSVLLDEQGTINYQAIVGSLIFLT*SIRMDIGFAVSQAACFMPNLASVHMRSVKRILRYLKGAPNVKLDYSRDSNFELTGFCDASY-GTGDPEKARSTSGSMYFLSGGVVHFSSSLQKITAQSTTEAELIAMSTCAKQGVYLSGILGELGWKNFRSVRIFCDNKGALLLAGQGNYGSRSKHLAFCFAGLRD*INQREIIIDHVSTKNELSDILTRFCSR 1050
G I + QH V+++L+K+ M DC TPG+G E+ +PE ++ L E+ YQ IVGSL+FLT + R +IG+AV M + HM KR+LRYL+G P++ L + R ++L +CDAS+ G+ + + RS++G ++ L+GGVV +S+LQK+TAQS+ AE+IAM+T A++ +YL G+L ELG+ ++ I D+ GA+ AG + RSK ++ + LR +N+ I++ V ++ +L+DILT+ R
Sbjct: 433 GEIIVSQHKYVMNILDKYQMVDCKPAATPGSGPEIEQEPENAIYLSEEDKKLYQGIVGSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRR-GQWDLKCYCDASFAGSSERLQKRSSTGYIFILAGGVVSAASTLQKLTAQSSVHAEIIAMATAAREAIYLQGVLSELGFP-CGNIPIHSDSTGAMSTAGNSMFRGRSKFISTRYWLLRQNVNKGNIVLKFVRSEEQLADILTKHLER 689
BLAST of mRNA_H-paniculata_contig49200.12095.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE) HSP 1 Score: 191 bits (485), Expect = 1.520e-50 Identity = 123/360 (34.17%), Postives = 194/360 (53.89%), Query Frame = 1
Query: 1 LRQSPKTWHRTIDTDLRKIGFVATVSDLCVYVKGSSNNY-IHAYNIRQRSAHHRAQQYGRRQSPFYTQGQIHYDRLWRPDANSRDRH-----PQDKECGTISIGQHHCVVSLLNKFGMDDCNSVHTPGTGKELTVKPEGSVLLDEQGTINYQAIVGSLIFLT*SIRMDIGFAVSQAACFMPNLASVHMRSVKRILRYLKGAPNVKLDYSRDS------NFELTGFCDASYGTGDPEKARSTSGSMYFLSGGVVHFSSSLQKITAQSTTEAELIAMSTCAKQG-VYLSGILGELGWKNFRSVRIFCDNKGALLLAGQGNYGSRSKHLAFCFAGLRD*INQREIIIDHVSTKNELSDILTRF 1041
L QSP W+ T+D L G+ T SD CVYV S N+ I + + QQ ++ T DR D R P+D E GT++I Q H V +LL +FGM + N V TPG G E++ +L YQ++ GS+++L R D+ +A Q + N A V+M + K +LRYL+G P + + Y R+ L F D+S+G +P+ RST+G ++FL+GG++ + + Q +TAQST EAE+ A+S A++ VY+S + EL +K F SV I D+ GAL +AG + R+KH+A + +R+ + + +I + H ++++L+DI T++
Sbjct: 718 LLQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNSIVISSVYVDDILITGGDQQLVDQKKKELT------DRFEMTDMGEVKRILGIDVPRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKREQIRLAAEQIRLAAFTDSSFGA-NPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKY 1070
BLAST of mRNA_H-paniculata_contig49200.12095.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE) HSP 1 Score: 186 bits (471), Expect = 2.370e-49 Identity = 119/352 (33.81%), Postives = 184/352 (52.27%), Query Frame = 1
Query: 1 LRQSPKTWHRTIDTDLRKIGFVATVSDLCVYVKGSSNN------YIHAYNIRQRSAHHRAQQYGRRQSPFYTQGQIHYDRLWRPDANSRDRHPQDKECGTISIGQHHCVVSLLNKFGMDDCNSVHTPGTGKELTVKPEGSVLLDEQGTINYQAIVGSLIFLT*SIRMDIGFAVSQAACFMPNLASVHMRSVKRILRYLKGAPNVKLDYSRDSNFELTGFCDASYGTGDPEKARSTSGSMYFLSGGVVHFSSSLQKITAQSTTEAELIAMSTCAKQGVYLSGILGELGWKNFRSVRIFCDNKGALLLAGQGNYGSRSKHLAFCFAGLRD*INQREIIIDHVSTKNELSDILTR 1038
L QSP W+ I+ L G+ T SD CVY+ S + Y+ I + +++ F R+ + +D E GT++I Q +L ++GM+ N V TPG G EL+ + LL + +QAI GSL++L R D+ +AV Q N A VHM + K +LRYL+G P++ + Y + F L+ F D+S+G +P+ RST+G ++FL GG++ + + Q + AQ+T EAEL A+S A++ VY+S + E+G+K FRSV I D+ GAL +A + SR+KH+A F LR+ I + H + L+DI T+
Sbjct: 372 LSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQ------RDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKK-GKFRLSCFTDSSFGA-NPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATK 715
BLAST of mRNA_H-paniculata_contig49200.12095.1 vs. uniprot
Match: A0A6H5K4S5_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S5_9PHAE) HSP 1 Score: 174 bits (442), Expect = 3.210e-48 Identity = 97/277 (35.02%), Postives = 159/277 (57.40%), Query Frame = 1
Query: 262 QDKECGTISIGQHHCVVSLLNKFGMDDCNSVHTPGTGKELTVKPEGSVLLDEQGTINYQAIVGSLIFLT*SIRMDIGFAVSQAACFMPNLASVHMRSVKRILRYLKGAPN-----------------VKLDYSRDSNFELTGFCDASYGTGDPEKARSTSGSMYFLSGGVVHFSSSLQKITAQSTTEAELIAMSTCAKQGVYLSGILGELGWKNFRSVRIFCDNKGALLLAGQGNYGSRSKHLAFCFAGLRD*INQREIIIDHVSTKNELSDILTRF 1041
+D E GT++I Q H V +LL +FGM + N V TPG G E++ +L YQ++ GS+++L R D+ +A Q + N A V+M + K +LRYL+G P + + Y R F L F D+S+G +P+ RST+G ++FL+GG++ + + Q +TAQST EAE+ A+S A++ VY+S + EL +K F SV I D+ GAL +AG + R+KH+A + +R+ + + +I + H ++++L+DI T++
Sbjct: 41 RDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVXXXXXXXXXXXXXXXSVLPIVYKR-GQFRLAAFTDSSFGA-NPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKY 315
BLAST of mRNA_H-paniculata_contig49200.12095.1 vs. uniprot
Match: A0A6H5K4S9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S9_9PHAE) HSP 1 Score: 177 bits (450), Expect = 5.100e-46 Identity = 100/272 (36.76%), Postives = 151/272 (55.51%), Query Frame = 1
Query: 223 LWRPDANSRDRHPQDKECGTISIGQHHCVVSLLNKFGMDDCNSVHTPGTGKELTVKPEGSVLLDEQGTINYQAIVGSLIFLT*SIRMDIGFAVSQAACFMPNLASVHMRSVKRILRYLKGAPNVKLDYSRDSNFELTGFCDASYGTGDPEKARSTSGSMYFLSGGVVHFSSSLQKITAQSTTEAELIAMSTCAKQGVYLSGILGELGWKNFRSVRIFCDNKGALLLAGQGNYGSRSKHLAFCFAGLRD*INQREIIIDHVSTKNELSDILTR 1038
LW N R I G H + + ++GM+ N V TPG G EL+ + LL + +QAI GSL++L R D+ +AV Q N A VHM + K +LRYL+G P++ + Y + F L+ F D+S+G +P+ RST+G ++FL GG++ + + Q + AQ+T EAEL A+S A++ VY+S + E+G+K FRSV I D+ GAL +A + SR+KH+A F LR+ I + H + L+DI T+
Sbjct: 615 LWNDAINDR----------LIIFGWHFEMTDMGERYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDMSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKK-GQFRLSCFTDSSFGA-NPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATK 874 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig49200.12095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig49200.12095.1 >prot_H-paniculata_contig49200.12095.1 ID=prot_H-paniculata_contig49200.12095.1|Name=mRNA_H-paniculata_contig49200.12095.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=163bp MDIGFAVSQAACFMPNLASVHMRSVKRILRYLKGAPNVKLDYSRDSNFELback to top mRNA from alignment at H-paniculata_contig49200:316..1368- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig49200.12095.1 ID=mRNA_H-paniculata_contig49200.12095.1|Name=mRNA_H-paniculata_contig49200.12095.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1053bp|location=Sequence derived from alignment at H-paniculata_contig49200:316..1368- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig49200:316..1368- >mRNA_H-paniculata_contig49200.12095.1 ID=mRNA_H-paniculata_contig49200.12095.1|Name=mRNA_H-paniculata_contig49200.12095.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=978bp|location=Sequence derived from alignment at H-paniculata_contig49200:316..1368- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |