prot_H-paniculata_contig49191.12092.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig49191.12092.1
Unique Name	prot_H-paniculata_contig49191.12092.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	131

Homology

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BLAST of mRNA_H-paniculata_contig49191.12092.1 vs. uniprot
Match: A0A8F0F724_9PHAE (Ribosomal protein L19 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F724_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 3.610e-63
Identity = 102/117 (87.18%), Postives = 109/117 (93.16%), Query Frame = 0

Query:   14 NKADFILSVEKLYLKEQVSLMQIGDLVKIGVSIKEGNKDRIQYYQGLILGKNGTGINLTITVRKVFQGIGVERKFLIHSPKFESIQILKSSRVRRSKLYYLRNFSEKESRLKPRFIK 130
            +K+DFI S+EKLYLK QVS +QIGDLVKIGV IKEGNKDRIQYYQGLI+GKN  GINLTITVRKVFQGIGVERKFLIHSPKFESI+ILKSSRVRRSKLYYLR FSEK SRLKPRF+K
Sbjct:   57 HKSDFISSIEKLYLKNQVSKIQIGDLVKIGVYIKEGNKDRIQYYQGLIIGKNNAGINLTITVRKVFQGIGVERKFLIHSPKFESIEILKSSRVRRSKLYYLRKFSEKGSRLKPRFVK 173

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BLAST of mRNA_H-paniculata_contig49191.12092.1 vs. uniprot
Match: A0A2I4Q2C7_9PHAE (50S ribosomal protein L19, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2C7_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 3.410e-50
Identity = 80/121 (66.12%), Postives = 97/121 (80.17%), Query Frame = 0

Query:    9 KDYISNKADFILSVEKLYLKEQVSLMQIGDLVKIGVSIKEGNKDRIQYYQGLILGKNGTGINLTITVRKVFQGIGVERKFLIHSPKFESIQILKSSRVRRSKLYYLRNFSEKESRLKPRFI 129
            K +  N    I SVEKLY K  + ++ +GD VKIG+SIKEGNKDRIQYYQG+++ K  TGINL I VRK FQGIGVER+FL+HSPKF+S+Q+LKS+R+RRSKLYYLRN S K SRLK +FI
Sbjct:    9 KQFSKNYKTLIDSVEKLYCKNDIKMVLVGDTVKIGISIKEGNKDRIQYYQGIVISKKNTGINLKIVVRKTFQGIGVERQFLLHSPKFQSVQVLKSARIRRSKLYYLRNISGKASRLKQKFI 129

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BLAST of mRNA_H-paniculata_contig49191.12092.1 vs. uniprot
Match: A0A0R6LUN6_UNDPI (50S ribosomal protein L19, chloroplastic n=25 Tax=Laminariales TaxID=2886 RepID=A0A0R6LUN6_UNDPI)

HSP 1 Score: 161 bits (407), Expect = 1.000e-48
Identity = 82/115 (71.30%), Postives = 98/115 (85.22%), Query Frame = 0

Query:   14 NKADFILSVEKLYLKEQVSLMQIGDLVKIGVSIKEGNKDRIQYYQGLILGKNGTGINLTITVRKVFQGIGVERKFLIHSPKFESIQILKSSRVRRSKLYYLRNFSEKESRLKPRF 128
            N  + I SVE +++K+ +S + +GD VKIGV IKEGNK+RIQYYQG+ILGKN +GINLTI+VRKVFQGIGVER FLIHSPKFESI+++KSSRVRRSKLYYLR+   K SRLK RF
Sbjct:   11 NDKELIDSVESVHIKKNLSKIFVGDTVKIGVFIKEGNKERIQYYQGIILGKNNSGINLTISVRKVFQGIGVERNFLIHSPKFESIEVIKSSRVRRSKLYYLRSIVGKGSRLKQRF 125

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BLAST of mRNA_H-paniculata_contig49191.12092.1 vs. uniprot
Match: A0A8F0F7M0_9PHAE (Ribosomal protein L19 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7M0_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 2.150e-48
Identity = 81/107 (75.70%), Postives = 94/107 (87.85%), Query Frame = 0

Query:   22 VEKLYLKEQVSLMQIGDLVKIGVSIKEGNKDRIQYYQGLILGKNGTGINLTITVRKVFQGIGVERKFLIHSPKFESIQILKSSRVRRSKLYYLRNFSEKESRLKPRF 128
            VE  Y+K+ VS + +GD VKIGV IKEGNK+RIQYYQG+ILGKN +G+NLTI+VRKVFQGIGVER+FLIHSPKFESI+I+KSSRVRRSKLYYLR+   K SRLK RF
Sbjct:   21 VESTYIKKDVSKIFVGDTVKIGVFIKEGNKERIQYYQGIILGKNNSGVNLTISVRKVFQGIGVERRFLIHSPKFESIEIIKSSRVRRSKLYYLRSIVGKGSRLKQRF 127

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BLAST of mRNA_H-paniculata_contig49191.12092.1 vs. uniprot
Match: A0A8F0JYX3_9PHAE (Ribosomal protein L19 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JYX3_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 1.240e-47
Identity = 78/108 (72.22%), Postives = 93/108 (86.11%), Query Frame = 0

Query:   21 SVEKLYLKEQVSLMQIGDLVKIGVSIKEGNKDRIQYYQGLILGKNGTGINLTITVRKVFQGIGVERKFLIHSPKFESIQILKSSRVRRSKLYYLRNFSEKESRLKPRF 128
            SVE  Y K+ +S + +GD +K+GV IKEGNK+R+QYYQG+ILGKN +GINLTI+VRKVFQGIGVERKFL+HSPK ESI+++KSSRVRRSKLYYLRN   K SRLK RF
Sbjct:   20 SVESAYKKKNLSQIFVGDTIKVGVFIKEGNKERVQYYQGIILGKNNSGINLTISVRKVFQGIGVERKFLVHSPKLESIEVIKSSRVRRSKLYYLRNIIGKGSRLKQRF 127

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BLAST of mRNA_H-paniculata_contig49191.12092.1 vs. uniprot
Match: A0A8F0FAK4_9PHAE (Ribosomal protein L19 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAK4_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 9.620e-45
Identity = 78/115 (67.83%), Postives = 91/115 (79.13%), Query Frame = 0

Query:   14 NKADFILSVEKLYLKEQVSLMQIGDLVKIGVSIKEGNKDRIQYYQGLILGKNGTGINLTITVRKVFQGIGVERKFLIHSPKFESIQILKSSRVRRSKLYYLRNFSEKESRLKPRF 128
            N    I  VE+   K+ +  + +GD VKIG+ IKEGNK+RIQYYQG+ILGK  +GINL I+VRKVFQGIGVER FLIHSPKFESI ++KSSRVRRSKLYYLRN   K+SRLK RF
Sbjct:   13 NSEKIINLVEEAQKKKDIPKIFVGDTVKIGILIKEGNKERIQYYQGIILGKKNSGINLMISVRKVFQGIGVERNFLIHSPKFESITVIKSSRVRRSKLYYLRNIIGKKSRLKERF 127

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BLAST of mRNA_H-paniculata_contig49191.12092.1 vs. uniprot
Match: A0A6B9TNS0_SARFS (50S ribosomal protein L19, chloroplastic n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A6B9TNS0_SARFS)

HSP 1 Score: 151 bits (381), Expect = 1.020e-44
Identity = 79/119 (66.39%), Postives = 97/119 (81.51%), Query Frame = 0

Query:   11 YISNKADFILSVEKLYLKEQVSLMQIGDLVKIGVSIKEGNKDRIQYYQGLILGKNGTGINLTITVRKVFQGIGVERKFLIHSPKFESIQILKSSRVRRSKLYYLRNFSE-KESRLKPRF 128
            Y+S K    L VE+ Y+K+ +  + +GD VKIGV IKEGNK+RIQYYQG+IL K  +GINLTI+VRK+FQGIG+ERKFLIHSPKFES+Q++KS+RVRRSKLYYLR  +  K SRLK RF
Sbjct:   12 YLSKKKILAL-VEQTYIKKSIPKVFVGDTVKIGVLIKEGNKERIQYYQGIILSKTNSGINLTISVRKIFQGIGIERKFLIHSPKFESLQVIKSARVRRSKLYYLRKTTTTKGSRLKQRF 129

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BLAST of mRNA_H-paniculata_contig49191.12092.1 vs. uniprot
Match: A0A141BSB2_9PHAE (50S ribosomal protein L19, chloroplastic n=1 Tax=Sargassum horneri TaxID=74089 RepID=A0A141BSB2_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 1.090e-44
Identity = 79/129 (61.24%), Postives = 102/129 (79.07%), Query Frame = 0

Query:    2 NSKITLEKDYIS-NKADFILSVEKLYLKEQVSLMQIGDLVKIGVSIKEGNKDRIQYYQGLILGKNGTGINLTITVRKVFQGIGVERKFLIHSPKFESIQILKSSRVRRSKLYYLRNFSE-KESRLKPRF 128
            N  + L++  +S +K   +  VE+ Y+K+ +  + +GD VKIGV IKEGNK+RIQYYQG+IL K  +GINLTI+VRK+FQGIG+ERKFLIHSPKFES++I+KS+RVRRSKLYYLR  +  K SRLK RF
Sbjct:    3 NLNLNLKEKVLSLSKKKILALVEQTYIKKNIPKVFVGDTVKIGVLIKEGNKERIQYYQGIILAKTNSGINLTISVRKIFQGIGIERKFLIHSPKFESVEIIKSARVRRSKLYYLRKTTTTKGSRLKQRF 131

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BLAST of mRNA_H-paniculata_contig49191.12092.1 vs. uniprot
Match: A0A2R4QPR9_9PHAE (50S ribosomal protein L19 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPR9_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 6.430e-43
Identity = 77/108 (71.30%), Postives = 90/108 (83.33%), Query Frame = 0

Query:   22 VEKLYLKEQVSLMQIGDLVKIGVSIKEGNKDRIQYYQGLILGKNGTGINLTITVRKVFQGIGVERKFLIHSPKFESIQILKSSRVRRSKLYYLRNFSE-KESRLKPRF 128
            VE+ Y K+  + + +GD VKIGV IKEGNK+R+QYYQG+IL K  +GINLTI VRKVFQGIGVERKFLIHSPKFESI+I+KS+RVRRSKLYYLR  +  K SRLK RF
Sbjct:   20 VEENYKKKNTANLFVGDTVKIGVLIKEGNKERVQYYQGIILAKKNSGINLTIYVRKVFQGIGVERKFLIHSPKFESIEIIKSARVRRSKLYYLRKITTTKGSRLKQRF 127

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BLAST of mRNA_H-paniculata_contig49191.12092.1 vs. uniprot
Match: A0A1I9LVW4_9PHAE (50S ribosomal protein L19, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVW4_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 9.530e-42
Identity = 72/122 (59.02%), Postives = 99/122 (81.15%), Query Frame = 0

Query:    9 KDYISNKADFILSVEKLYLKEQVSLMQIGDLVKIGVSIKEGNKDRIQYYQGLILGKNGTGINLTITVRKVFQGIGVERKFLIHSPKFESIQILKSSRVRRSKLYYLRNFSEKESRLKPRFIK 130
            K +I+N+  FI SVEK+++K+ +  + +GD VK+GV ++EGNK+R+Q+Y+G+IL K+ + IN TI+VRKVFQGIGVER FL++SPKF SI+++KSSR+RRSKLYYLRN   K  RLK RF K
Sbjct:   18 KIFINNR--FIESVEKVHIKKNLKKLFVGDTVKVGVFVEEGNKERVQFYEGIILAKSKSCINFTISVRKVFQGIGVERAFLVNSPKFASIEVIKSSRIRRSKLYYLRNIIGKAGRLKERFKK 137

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig49191.12092.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig49191.12092.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A8F0F724_9PHAE	3.610e-63	87.18	Ribosomal protein L19 n=1 Tax=Protohalopteris sp. ...	[more]
A0A2I4Q2C7_9PHAE	3.410e-50	66.12	50S ribosomal protein L19, chloroplastic n=1 Tax=D...	[more]
A0A0R6LUN6_UNDPI	1.000e-48	71.30	50S ribosomal protein L19, chloroplastic n=25 Tax=...	[more]
A0A8F0F7M0_9PHAE	2.150e-48	75.70	Ribosomal protein L19 n=2 Tax=Laminariales TaxID=2...	[more]
A0A8F0JYX3_9PHAE	1.240e-47	72.22	Ribosomal protein L19 n=1 Tax=Chorda asiatica TaxI...	[more]
A0A8F0FAK4_9PHAE	9.620e-45	67.83	Ribosomal protein L19 n=1 Tax=Desmarestia aculeata...	[more]
A0A6B9TNS0_SARFS	1.020e-44	66.39	50S ribosomal protein L19, chloroplastic n=13 Tax=...	[more]
A0A141BSB2_9PHAE	1.090e-44	61.24	50S ribosomal protein L19, chloroplastic n=1 Tax=S...	[more]
A0A2R4QPR9_9PHAE	6.430e-43	71.30	50S ribosomal protein L19 n=3 Tax=Fucaceae TaxID=3...	[more]
A0A1I9LVW4_9PHAE	9.530e-42	59.02	50S ribosomal protein L19, chloroplastic n=1 Tax=P...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001857	Ribosomal protein L19	PRINTS	PR00061	RIBOSOMALL19	coord: 18..47 score: 26.39 coord: 102..127 score: 46.63 coord: 48..77 score: 43.19
IPR001857	Ribosomal protein L19	PFAM	PF01245	Ribosomal_L19	coord: 19..125 e-value: 6.1E-36 score: 122.7
IPR001857	Ribosomal protein L19	PIRSF	PIRSF002191	Ribosomal_L19	coord: 2..130 e-value: 1.2E-38 score: 129.9
IPR001857	Ribosomal protein L19	TIGRFAM	TIGR01024	TIGR01024	coord: 19..126 e-value: 3.3E-34 score: 115.4
IPR001857	Ribosomal protein L19	PANTHER	PTHR15680	RIBOSOMAL PROTEIN L19	coord: 21..128
IPR001857	Ribosomal protein L19	HAMAP	MF_00402	Ribosomal_L19	coord: 16..128 score: 25.28
IPR038657	Ribosomal protein L19 superfamily	GENE3D	2.30.30.790		coord: 6..127 e-value: 4.2E-13 score: 51.2
None	No IPR available	PANTHER	PTHR15680:SF11		coord: 21..128
IPR018257	Ribosomal protein L19, conserved site	PROSITE	PS01015	RIBOSOMAL_L19	coord: 100..115
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 18..127

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig49191	contig	H-paniculata_contig49191:360..752 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig49191.12092.1	mRNA_H-paniculata_contig49191.12092.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig49191 360..761 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig49191.12092.1 ID=prot_H-paniculata_contig49191.12092.1|Name=mRNA_H-paniculata_contig49191.12092.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=131bp
MNSKITLEKDYISNKADFILSVEKLYLKEQVSLMQIGDLVKIGVSIKEGN
KDRIQYYQGLILGKNGTGINLTITVRKVFQGIGVERKFLIHSPKFESIQI
LKSSRVRRSKLYYLRNFSEKESRLKPRFIK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001857	Ribosomal_L19
IPR038657	L19_sf
IPR018257	Ribosomal_L19_CS
IPR008991	Translation_prot_SH3-like_sf