mRNA_H-paniculata_contig49111.12085.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig49111.12085.1
Unique NamemRNA_H-paniculata_contig49111.12085.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig49111.12085.1 vs. uniprot
Match: A0A6S7HU51_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HU51_PARCT)

HSP 1 Score: 124 bits (310), Expect = 9.630e-29
Identity = 73/202 (36.14%), Postives = 121/202 (59.90%), Query Frame = 3
Query:  480 GEPKSVAEAFKGPETEKWRAAMEEEWGALMKNGTWESEDPGSLPAGRNWNNTLDDFLVGIGLERSITDLCLYFSHGEGGETNLLVAVYVDDLVIAG-RREKVDEFKHNISQRFRMKDLGPLSRVLEIEVRRDRPNGTITISQGSYIREALKRFGFDECRGAPTPVEGKVKISAPDRGRGGNSTEYRDMVGSLMYASTGTRPD 1082
            G P++  EA   P+  +W  AM+EE  +L +N T+E     +LP GRNWN  L + L   G  R+  D C+Y    +  +  ++V V+VDDL+IA    + ++EFK ++  +F+MKDLG ++  L ++ ++ +  G I ++Q  +I + L+RFG  +C+   TP E +++ +    G   N+ +YR+M+GSL+YA T TRPD
Sbjct:   67 GLPQNYTEAMGSPQAREWEKAMKEEISSLKENDTYELS---TLPEGRNWNILLHEHLANDGFVRNHADHCVYKKQVD--DKIVIVIVWVDDLIIASDSMQLMEEFKESMKIQFKMKDLGRITFFLGMDFKQSK--GEIKMNQKRFILKILERFGMIDCKPRLTPSEQRLEFNC---GELSNARQYREMIGSLIYAMTCTRPD 258          
BLAST of mRNA_H-paniculata_contig49111.12085.1 vs. uniprot
Match: A0A409WVI7_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WVI7_9AGAR)

HSP 1 Score: 126 bits (316), Expect = 4.780e-28
Identity = 74/171 (43.27%), Postives = 96/171 (56.14%), Query Frame = 3
Query:  600 GSLPAGRNWNNTLDDFLVGIGLERSITDLCLYFSHGEGGETNLLVAVYVDDLVIAGR-REKVDEFKHNISQRFRMKDLGPLSRVLEIEVRRDRPNGTITISQGSYIREALKRFGFDECRGAPTPVEGKVKISAPDRGRGGNSTE---------YRDMVGSLMYASTGTRPD 1082
            G   AGR WN T D  L  +G  R   + CLY   GEGG+   LV VYVDDL++A   R  +DE K  ++  F+M+DLGP S VL I++RRDR    I +SQ  YI   LKR G ++C+   TP+  + +++A D       TE         Y  +VGSLMYA  GTRPD
Sbjct: 1152 GLKQAGRTWNKTFDSSLKDLGFTRLDAETCLYVMRGEGGKLCFLV-VYVDDLILAATSRAYMDEIKTKLAATFKMRDLGPASYVLGIQIRRDRRKRIIGLSQRQYIDTVLKRCGMEDCKPVFTPLSTQNRLTADDPINNDTLTEMTINNKTVSYATVVGSLMYAMMGTRPD 1321          
BLAST of mRNA_H-paniculata_contig49111.12085.1 vs. uniprot
Match: A0A087T1Z9_STEMI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087T1Z9_STEMI)

HSP 1 Score: 125 bits (315), Expect = 5.940e-28
Identity = 68/167 (40.72%), Postives = 101/167 (60.48%), Query Frame = 3
Query:  600 GSLPAGRNWNNTLDDFLVGIGLERSITDLCLYFSHGEGGETNLLVAVYVDDLVIAGRREKVDEFKHNISQRFRMKDLGPLSRVLEIEVRRDRPNGTITISQGSYIREALKRFGFDECRGAPTPVEGKVKISAPDRGRGG----NSTE--YRDMVGSLMYASTGTRPD 1082
            G   +GR WN  L+DFL+  GL+RS    C+YF H    E N+++ +YVDDL+I G   +++EFK +I +RF +KDLGP S++L +++ ++  NG+ T+ Q  YI E L+ F   E + A TP++  +K    D  +      NS E  YR  +GSL+Y S GT PD
Sbjct:  831 GLRQSGRAWNTCLNDFLIQYGLKRSSAKPCIYFCH----EKNIIIGIYVDDLLIVGNMAEINEFKGSIKKRFSVKDLGPASQILSMQICKEE-NGSFTLDQIVYILEILETFKMTEAKCASTPLDFSIKYKKVDEQQWEEIKENSKEIPYRQAIGSLLYMSCGTHPD 992          
BLAST of mRNA_H-paniculata_contig49111.12085.1 vs. uniprot
Match: A0A1M2VT18_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Trametes TaxID=5324 RepID=A0A1M2VT18_TRAPU)

HSP 1 Score: 124 bits (312), Expect = 1.590e-27
Identity = 72/171 (42.11%), Postives = 95/171 (55.56%), Query Frame = 3
Query:  600 GSLPAGRNWNNTLDDFLVGIGLERSITDLCLYFSHGEGGETNLLVAVYVDDLVIAGR-REKVDEFKHNISQRFRMKDLGPLSRVLEIEVRRDRPNGTITISQGSYIREALKRFGFDECRGAPTPVEGKVKISAPDRGRG---------GNSTEYRDMVGSLMYASTGTRPD 1082
            G   AGR WN TLD  L G+G  R  ++ CLY    + G+   LV VYVDDL++A   R  +DE K  ++ +F+M+DLG  S +L I +RRDRP   I +SQ  YI   L R+G  +C+   TP+   VK SA D             G S  Y  ++GS+MYA  GTRPD
Sbjct: 1132 GLKQAGRTWNKTLDRKLTGLGFNRLDSETCLYVFRDDKGQLCFLV-VYVDDLLLAATSRAFMDEVKRKLTAQFKMRDLGEASYILGIAIRRDRPARAIYLSQRQYIDTVLDRYGMKDCKPQYTPMSASVKPSADDPEDNTTLHSITIEGRSVSYASVIGSMMYAMMGTRPD 1301          
BLAST of mRNA_H-paniculata_contig49111.12085.1 vs. uniprot
Match: Q10DK8_ORYSJ (Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q10DK8_ORYSJ)

HSP 1 Score: 117 bits (294), Expect = 7.360e-26
Identity = 74/202 (36.63%), Postives = 114/202 (56.44%), Query Frame = 3
Query:  486 PKSVAEAFKGPETEKWRAAMEEEWGALMKNGTWE-SEDP-GSLPAGRNWNNTLDDFLVGIGLERSITDLCLYFSHGEGGETNLLVAVYVDDLVIAGRR-EKVDEFKHNISQRFRMKDLGPLSRVLEIEVRRDRPNGTITISQGSYIREALKRFGFDECRGAPTPVEGKVKISAPDRGRGGNSTEYRDMVGSLMYASTGTRPD 1082
            PKS++EA+  P+ + W+ A+  E  +++ NGTWE +E P G    G  W       L   G   +  D C+Y+ HG GGE  +L+ +YVDD++I G   E ++E K  +SQ F MKDLG    +L I++  +R    IT+ Q  Y+ + L RFG+ + + +PTP +  + +    R    N  EY  ++GSLMY ++ TRPD
Sbjct:  146 PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKHVGCKW--VFKKKLRPNGFAVNKADKCVYYRHG-GGE-GVLLCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVGDVILNIKL--NRCENVITLLQSHYVEKILNRFGYIDSKPSPTPYDPNLLLRKKKR-IARNQLEYSQIIGSLMYLASATRPD 340          
BLAST of mRNA_H-paniculata_contig49111.12085.1 vs. uniprot
Match: A0A1J3F7G4_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3F7G4_NOCCA)

HSP 1 Score: 117 bits (292), Expect = 6.290e-25
Identity = 65/159 (40.88%), Postives = 89/159 (55.97%), Query Frame = 3
Query:  618 RNWNNTLDDFLVGIGLERSITDLCLYFSHGEGGETNLLVAVYVDDLVIAGRR-EKVDEFKHNISQRFRMKDLGPLSRVLEIEVRRDRPNGTITISQGSYIREALKRFGFDECRGAPTPVEGKVKISAPDRGRGGNSTE---YRDMVGSLMYASTGTRPD 1082
            R WN   + F+ G    RS  D C+Y    EGG   LL+  YVDD++IA +   ++D  K  +S  F MKD+G  SR+L I+++RDR  G + +SQ SY+ + +KRF   E +   TP+ G  K+SA         TE   Y   VGS+MYA  GTRPD
Sbjct:  997 RLWNKKFNQFITGEKFIRSHQDSCVYVKKVEGGYVYLLL--YVDDMLIAAKEMAEIDRLKSALSSEFEMKDMGAASRILGIDIKRDRKEGVLYLSQSSYLEKVVKRFNMGEAKSVNTPIGGHFKLSAVKEVSECIDTEKYPYSSAVGSVMYAMIGTRPD 1153          
BLAST of mRNA_H-paniculata_contig49111.12085.1 vs. uniprot
Match: A0A0A9XEM5_LYGHE (Copia protein (Fragment) n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9XEM5_LYGHE)

HSP 1 Score: 115 bits (288), Expect = 9.330e-25
Identity = 68/162 (41.98%), Postives = 96/162 (59.26%), Query Frame = 3
Query:  600 GSLPAGRNWNNTLDDFLVGIGLERSITDLCLYFSHGEGGETNLLVAVYVDDLVI-AGRREKVDEFKHNISQRFRMKDLGPLSRVLEIEVRRDRPNGTITISQGSYIREALKRFGFDECRGAPTPVEGKVKISAPDRGRGGNSTEYRDMVGSLMYASTGTRPD 1082
            G   AGR W   LD  L  +  + S  D C Y   GEGGE  +L+AVYVDDLVI +  REK+DE K ++S+ F M+D+G ++  L IE  RD+  G + +SQ  YI + LK F  ++ +   TP+E  +K+  P  G   +   Y+ ++GSLMY +T TRPD
Sbjct:  174 GLKQAGRQWFKKLDARLKELKFQPSFADPCFYI-RGEGGE-KILIAVYVDDLVILSANREKLDELKEDLSRTFEMRDIGKINYCLGIEFSRDKDGGVL-MSQEKYINKLLKTFRMEKSKTMRTPMEANLKLEKPLEGVCPD-VPYQSLIGSLMYLATATRPD 331          
BLAST of mRNA_H-paniculata_contig49111.12085.1 vs. uniprot
Match: A0A7D9HG25_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HG25_PARCT)

HSP 1 Score: 114 bits (286), Expect = 1.080e-24
Identity = 63/162 (38.89%), Postives = 96/162 (59.26%), Query Frame = 3
Query:  600 GSLPAGRNWNNTLDDFLVGIGLERSITDLCLYFSHGEGGETNLLVAVYVDDLVIAGRR-EKVDEFKHNISQRFRMKDLGPLSRVLEIEVRRDRPNGTITISQGSYIREALKRFGFDECRGAPTPVEGKVKISAPDRGRGGNSTEYRDMVGSLMYASTGTRPD 1082
            G   +GRNWN  LD++L+  G  R+  D C+Y    + GE  ++V ++VDDL+IA    +K+ +FK N+  +FRMKDLG +S  L I  ++   NG I ++Q  YI++ L RFG  +C+   TP E + +  +       +   YR++VGSL+Y  T TRPD
Sbjct:  297 GLKQSGRNWNRVLDEYLISDGFVRNPVDHCVY--QKQTGEDIIIVVIWVDDLIIASSNTDKIRQFKENMKSKFRMKDLGEISYFLGISFKQG--NGVIKMNQKRYIQKILDRFGMSDCKPRTTPCEQRFEGMSDSEQV--DPRRYREIVGSLIYLMTCTRPD 452          
BLAST of mRNA_H-paniculata_contig49111.12085.1 vs. uniprot
Match: A0A2J7RGU0_9NEOP (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7RGU0_9NEOP)

HSP 1 Score: 113 bits (283), Expect = 1.220e-24
Identity = 62/158 (39.24%), Postives = 94/158 (59.49%), Query Frame = 3
Query:  612 AGRNWNNTLDDFLVGIGLERSITDLCLYFSHGEGGETNLLVAVYVDDLVIAGRREKVDEFKHNISQRFRMKDLGPLSRVLEIEVRRDRPNG-TITISQGSYIREALKRFGFDECRGAPTPVEGKVKISAPDRGRGGNSTEYRDMVGSLMYASTGTRPD 1082
            +G++WN+T+    V  GL++   D C++F+        ++VA+YVDD++I G R+ V++ K  +SQR  +KDLGP+S  L I V  DRPNG  I I Q +Y+ E LK FG  +C+G  TP +     +  D  +  +  +Y+  VG L Y +T TRPD
Sbjct:  135 SGKDWNDTITFIFVSFGLKQCTKDPCVFFND------RIIVAIYVDDMIICGTRKDVNDCKRQLSQRLNVKDLGPVSNFLGINV--DRPNGYVIKIHQENYVNETLKTFGMLDCKGCVTPRDPNYN-NFLDGDKPFDEIQYKAAVGRLQYIATCTRPD 283          
BLAST of mRNA_H-paniculata_contig49111.12085.1 vs. uniprot
Match: UPI00142E19AD (uncharacterized protein LOC103874474 n=1 Tax=Brassica campestris TaxID=3711 RepID=UPI00142E19AD)

HSP 1 Score: 115 bits (289), Expect = 1.540e-24
Identity = 63/165 (38.18%), Postives = 94/165 (56.97%), Query Frame = 3
Query:  600 GSLPAGRNWNNTLDDFLVGIGLERSITDLCLYFSHGEGGETNLLVAVYVDDLVIAGRRE-KVDEFKHNISQRFRMKDLGPLSRVLEIEVRRDRPNGTITISQGSYIREALKRFGFDECRGAPTPVEGKVKISAPDRGRGGNSTE---YRDMVGSLMYASTGTRPD 1082
            G   A R WN   + FLV  G  RS +DLC+Y     G E  + + +YVDD+++A +++ ++ + K  +S  F MKD+GP SR+L I+++RDR   T+ + Q  YI++ LKRF   E +   TP+    K+++         TE   Y   VGS+MYA  GTRPD
Sbjct:  988 GLKQAPRQWNKRFNSFLVSQGFIRSDSDLCVYIKE-VGPEDYVYLLLYVDDMLLAAKQKSEIQKLKDVLSSEFEMKDMGPASRILGIDIKRDREQDTLKLCQSGYIQKVLKRFKMSESKAVATPMGSHFKLASVKNADERIDTEKVPYLSAVGSVMYAMVGTRPD 1151          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig49111.12085.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6S7HU51_PARCT9.630e-2936.14Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A409WVI7_9AGAR4.780e-2843.27Integrase catalytic domain-containing protein (Fra... [more]
A0A087T1Z9_STEMI5.940e-2840.72Retrovirus-related Pol polyprotein from transposon... [more]
A0A1M2VT18_TRAPU1.590e-2742.11Retrovirus-related Pol polyprotein from transposon... [more]
Q10DK8_ORYSJ7.360e-2636.63Retrotransposon protein, putative, Ty1-copia subcl... [more]
A0A1J3F7G4_NOCCA6.290e-2540.88Retrovirus-related Pol polyprotein from transposon... [more]
A0A0A9XEM5_LYGHE9.330e-2541.98Copia protein (Fragment) n=2 Tax=Lygus hesperus Ta... [more]
A0A7D9HG25_PARCT1.080e-2438.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2J7RGU0_9NEOP1.220e-2439.24Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI00142E19AD1.540e-2438.18uncharacterized protein LOC103874474 n=1 Tax=Brass... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig49111contigH-paniculata_contig49111:79..1373 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score113.6
Seed ortholog evalue9.5e-23
Seed eggNOG ortholog698440.XP_007296447.1
Hectar predicted targeting categoryother localisation
GOsGO:0000943,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003887,GO:0003964,GO:0004518,GO:0004540,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006259,GO:0006278,GO:0006508,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0019538,GO:0032196,GO:0032197,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0090501,GO:0097159,GO:0140096,GO:0140097,GO:0140098,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576
EggNOG free text desc.polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN)
EggNOG OGs39YUU@33154,3P1DN@4751,3QRDY@4890,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelAscomycota
Best eggNOG OGNA|NA|NA
Exons3
Model size1082
Cds size540
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig49111.12085.1prot_H-paniculata_contig49111.12085.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig49111 756..1373 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930452.8921578-UTR-H-paniculata_contig49111:78..3281622930452.8921578-UTR-H-paniculata_contig49111:78..328Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig49111 79..328 +
1691481298.2588792-UTR-H-paniculata_contig49111:78..3281691481298.2588792-UTR-H-paniculata_contig49111:78..328Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig49111 79..328 +
1622930452.9074697-UTR-H-paniculata_contig49111:463..7551622930452.9074697-UTR-H-paniculata_contig49111:463..755Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig49111 464..755 +
1691481298.2779744-UTR-H-paniculata_contig49111:463..7551691481298.2779744-UTR-H-paniculata_contig49111:463..755Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig49111 464..755 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930452.9253924-CDS-H-paniculata_contig49111:755..12131622930452.9253924-CDS-H-paniculata_contig49111:755..1213Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig49111 756..1213 +
1691481298.2902975-CDS-H-paniculata_contig49111:755..12131691481298.2902975-CDS-H-paniculata_contig49111:755..1213Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig49111 756..1213 +
1622930452.9475436-CDS-H-paniculata_contig49111:1291..13731622930452.9475436-CDS-H-paniculata_contig49111:1291..1373Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig49111 1292..1373 +
1691481298.3031902-CDS-H-paniculata_contig49111:1291..13731691481298.3031902-CDS-H-paniculata_contig49111:1291..1373Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig49111 1292..1373 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig49111.12085.1

>prot_H-paniculata_contig49111.12085.1 ID=prot_H-paniculata_contig49111.12085.1|Name=mRNA_H-paniculata_contig49111.12085.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=180bp
MEEEWGALMKNGTWESEDPGSLPAGRNWNNTLDDFLVGIGLERSITDLCL
YFSHGEGGETNLLVAVYVDDLVIAGRREKVDEFKHNISQRFRMKDLGPLS
RVLEIEVRRDRPNGTITISQGSYIREALKRFGFDECRGAPTPVEGKVKIS
APDRGRGGNSTEYRDMVGSLMYASTGTRPD
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mRNA from alignment at H-paniculata_contig49111:79..1373+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig49111.12085.1 ID=mRNA_H-paniculata_contig49111.12085.1|Name=mRNA_H-paniculata_contig49111.12085.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1295bp|location=Sequence derived from alignment at H-paniculata_contig49111:79..1373+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTGGACCACCTTCACGTCTTCGGCTGCACGGCGTATGTTATGTTCCAGTC ACAGCAGAGACTTAAGCTTGACGACAAAGCATGGGCGGGGGTGTTTCTGG GGTACGACGAGGACAGCCCAAGTTATGGCGTATATAACCCGGAAAACAAG AGCGTCCAATTGAGCAGGAACGTGAGATTTGACGAAGAGAACTTCGTAAT GGGCCATCGCGGACAGCAGGAGGACGACGGGACGCGAAACATGGAAGATT GTCTTTCAACACCACCAGTCACGCCAGTGGTCACTCGATCGCGCGCCCGA GGCGAGCAAGCAAGCGTAACAAACACCGAAGACCGGACGTCGGCGTCACA AATGCCGCCAATATTATCGACACATTCGCTGCCAGCCGCCAGCGCAAATC CGTTCAGTGTCTTGAGCGATGGCGATGATGGCGAAAATAACGGCGACTCC AAGATGAAGGATGCGGAACCCTCAGTCGAAGACGCACCATCAGTAGGGAC AGCCGCACCCGCGTCGCGGGAGAACACCACGAAGCAGTCAGGGATGGAGG CGCAGCGTCCGCGAGATCGGTCACCAATACGAACACGGGCGACCTTACAG AGGCGGTATCTAAGGGGGAGCCGAAATCCGTGGCAGAAGCATTCAAGGGT CCAGAGACGGAAAAATGGCGCGCGGCAATGGAAGAAGAATGGGGGGCACT GATGAAAAATGGGACATGGGAAAGCGAAGACCCGGGGAGTTTACCCGCAG GGCGAAACTGGAATAACACTCTTGACGATTTTCTTGTTGGGATAGGACTC GAACGTTCCATTACCGACTTATGCTTGTACTTTTCCCACGGCGAAGGGGG AGAGACAAACCTTCTGGTGGCCGTGTACGTTGATGACCTGGTCATTGCTG GTCGTCGTGAGAAGGTAGACGAGTTCAAGCATAACATAAGTCAGCGTTTT AGGATGAAAGACTTGGGCCCTCTCTCGCGCGTGTTGGAAATAGAAGTACG ACGTGACCGCCCTAATGGTACCATAACCATCTCACAGGGTAGCTATATCC GCGAGGCACTAAAAAGATTCGGTTTTGACGAGTGTCGAGGAGCACCCACC CCTGTAGAGGGAAAAGTGAAGATTTCGGCACCCGAGTCGGCCGACAAGCC CTCCGAACGGAAGTCACTTGGAGCTGTACTGTCGGACATAGGCGCAGGAG TACAAGAAAGCAGCAGAGGGAGAGGTGGCAATTCGACTGAATACAGAGAC ATGGTAGGATCACTCATGTACGCCTCGACAGGAACTAGACCTGAT
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Coding sequence (CDS) from alignment at H-paniculata_contig49111:79..1373+

>mRNA_H-paniculata_contig49111.12085.1 ID=mRNA_H-paniculata_contig49111.12085.1|Name=mRNA_H-paniculata_contig49111.12085.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1080bp|location=Sequence derived from alignment at H-paniculata_contig49111:79..1373+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAAGAAGAATGGGGGGCACTGATGAAAAATGGGACATGGGAAAGCGA
AGACCCGGGGAGTTTACCCGCAGGGCGAAACTGGAATAACACTCTTGACG
ATTTTCTTGTTGGGATAGGACTCGAACGTTCCATTACCGACTTATGCTTG
TACTTTTCCCACGGCGAAGGGGGAGAGACAAACCTTCTGGTGGCCGTGTA
CGTTGATGACCTGGTCATTGCTGGTCGTCGTGAGAAGGTAGACGAGTTCA
AGCATAACATAAGTCAGCGTTTTAGGATGAAAGACTTGGGCCCTCTCTCG
CGCGTGTTGGAAATAGAAGTACGACGTGACCGCCCTAATGGTACCATAAC
CATCTCACAGGGTAGCTATATCCGCGAGGCACTAAAAAGATTCGGTTTTG
ACGAGTGTCGAGGAGCACCCACCCCTGTAGAGGGAAAAGTGAAGATTTCG
GCACCCGAATGGAAGAAGAATGGGGGGCACTGATGAAAAATGGGACATGG
GAAAGCGAAGACCCGGGGAGTTTACCCGCAGGGCGAAACTGGAATAACAC
TCTTGACGATTTTCTTGTTGGGATAGGACTCGAACGTTCCATTACCGACT
TATGCTTGTACTTTTCCCACGGCGAAGGGGGAGAGACAAACCTTCTGGTG
GCCGTGTACGTTGATGACCTGGTCATTGCTGGTCGTCGTGAGAAGGTAGA
CGAGTTCAAGCATAACATAAGTCAGCGTTTTAGGATGAAAGACTTGGGCC
CTCTCTCGCGCGTGTTGGAAATAGAAGTACGACGTGACCGCCCTAATGGT
ACCATAACCATCTCACAGGGTAGCTATATCCGCGAGGCACTAAAAAGATT
CGGTTTTGACGAGTGTCGAGGAGCACCCACCCCTGTAGAGGGAAAAGTGA
AGATTTCGGCACCCGACAGAGGGAGAGGTGGCAATTCGACTGAATACAGA
GACATGGTAGGATCACTCATGTACGCCTCGACAGGAACTAGACCTGATCA
GAGGGAGAGGTGGCAATTCGACTGAATACAGAGACATGGTAGGATCACTC
ATGTACGCCTCGACAGGAACTAGACCTGAT
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