prot_H-paniculata_contig4907.12072.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4907.12072.1
Unique Nameprot_H-paniculata_contig4907.12072.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length54
Homology
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BLAST of mRNA_H-paniculata_contig4907.12072.1 vs. uniprot
Match: D8LNZ5_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNZ5_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 4.460e-11
Identity = 31/37 (83.78%), Postives = 33/37 (89.19%), Query Frame = 0 
Query:   18 VRVAVRVRPLLSFEKTERLGECVSCVANSTQLLVGDG 54
            VRVAVRVRPLLSFEKTERLGEC+SC+  S QL VGDG
Sbjct:    7 VRVAVRVRPLLSFEKTERLGECLSCIPQSKQLCVGDG 43
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BLAST of mRNA_H-paniculata_contig4907.12072.1 vs. uniprot
Match: A0A6H5KW93_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW93_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 4.490e-11
Identity = 31/37 (83.78%), Postives = 33/37 (89.19%), Query Frame = 0 
Query:   18 VRVAVRVRPLLSFEKTERLGECVSCVANSTQLLVGDG 54
            VRVAVRVRPLLSFEKTERLGEC+SC+  S QL VGDG
Sbjct:    7 VRVAVRVRPLLSFEKTERLGECLSCIPQSKQLCVGDG 43
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4907.12072.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LNZ5_ECTSI4.460e-1183.78Kinesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5KW93_9PHAE4.490e-1183.78Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..54
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
IPR001752Kinesin motor domainPROSITEPS50067KINESIN_MOTOR_2coord: 17..54
score: 9.097

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4907contigH-paniculata_contig4907:4355..4516 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4907.12072.1mRNA_H-paniculata_contig4907.12072.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4907 4284..4516 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4907.12072.1 ID=prot_H-paniculata_contig4907.12072.1|Name=mRNA_H-paniculata_contig4907.12072.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=54bp
MSPPGALAASAAAAGCSVRVAVRVRPLLSFEKTERLGECVSCVANSTQLL
VGDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001752Kinesin_motor_dom