prot_H-paniculata_contig4893.12045.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4893.12045.1
Unique Nameprot_H-paniculata_contig4893.12045.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length186
Homology
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BLAST of mRNA_H-paniculata_contig4893.12045.1 vs. uniprot
Match: A0A6H5L256_9PHAE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L256_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 6.100e-22
Identity = 65/153 (42.48%), Postives = 92/153 (60.13%), Query Frame = 0 
Query:   25 ASLKPPPAKHAN---SLYERRHTAREQEAANMAAEAQ-NWPSLTVVSRLEAEIAQYDKAPTIVSHQSA-LLQYWSDAAKPTLDSGGNVLEKPRSPLLSILARVFRRIDSTSCQSDCDFSSLAITMSKLRRSMVPECVDK-MFLKLNVEHIPEV 171
            A+  PPP K A    + YERR   + QEAA     A+ + PS+T   R++ E+ +Y K P  V  +   +L +W DA  P LD  GNV+   + P+LS+LARV+  IDSTSCQS+ +FS L    + LR++MVP+ V+  MFL+ N   IPE+
Sbjct:  110 AAATPPPEKRARVATTAYERRQARKVQEAAAARTSARRDQPSVT--DRVQKEVDEYTKLPAAVPAKDYDVLGFWRDAGSPRLDPHGNVVSAAQFPILSMLARVYLCIDSTSCQSEREFSGLGFVYNNLRQAMVPDRVEMVMFLRSNPHLIPEI 260
[Close]
BLAST of mRNA_H-paniculata_contig4893.12045.1 vs. uniprot
Match: A0A6H5L902_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L902_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 8.610e-21
Identity = 64/157 (40.76%), Postives = 92/157 (58.60%), Query Frame = 0 
Query:   32 AKHANSLYERRHTAREQEAANMAAEAQ-NWPSLTVVSRLEAEIAQYDKAPTIVSHQSA-LLQYWSDAAKPTLDSGGNVLEKPRSPLLSILARVFRRIDSTSCQSDCDFSSLAITMSKLRRSMVPECVDK-MFLKLNVEHIPEVRAVLQRLDGRKAIQ 185
            A+ A + YERR   + QEAA     A+ + PS+T   R++ E+ +Y K P  V  +   +L +W DA  P LD  GNV+   + P+LS+LARV+  IDSTSCQS+ +FS L    + LR++MVP+ V+  MFL+ N   IPE+  +   L    A Q
Sbjct:  122 ARVATTAYERRQARKVQEAAAARTSARRDQPSVT--DRVQKEVDEYTKLPAAVPAKDYDVLGFWRDAGSPRLDPHGNVVSAAQFPILSMLARVYLCIDSTSCQSEREFSGLGFVYNNLRQAMVPDRVEMVMFLRSNPHLIPEINKLDNGLGKLLAAQ 276
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4893.12045.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L256_9PHAE6.100e-2242.48Dimer_Tnp_hAT domain-containing protein (Fragment)... [more]
A0A6H5L902_9PHAE8.610e-2140.76Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 26..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4893contigH-paniculata_contig4893:9041..9598 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4893.12045.1mRNA_H-paniculata_contig4893.12045.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4893 8742..11123 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4893.12045.1 ID=prot_H-paniculata_contig4893.12045.1|Name=mRNA_H-paniculata_contig4893.12045.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=186bp
MNEAGRPTRLAAAPTALESESGEQASLKPPPAKHANSLYERRHTAREQEA
ANMAAEAQNWPSLTVVSRLEAEIAQYDKAPTIVSHQSALLQYWSDAAKPT
LDSGGNVLEKPRSPLLSILARVFRRIDSTSCQSDCDFSSLAITMSKLRRS
MVPECVDKMFLKLNVEHIPEVRAVLQRLDGRKAIQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf