prot_H-paniculata_contig4888.12031.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4888.12031.1
Unique Nameprot_H-paniculata_contig4888.12031.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length435
Homology
BLAST of mRNA_H-paniculata_contig4888.12031.1 vs. uniprot
Match: D8LJH7_ECTSI (Chromatin remodeling complex subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH7_ECTSI)

HSP 1 Score: 238 bits (607), Expect = 1.120e-65
Identity = 123/198 (62.12%), Postives = 153/198 (77.27%), Query Frame = 0
Query:   16 SDKVLCLLCNE-LASVQGLAVHRRDRFCSADCMEAYGSRSSSHSLRRVVSDRDGGVCSNKSCGRDCQALVSSLKAVESQQKRREILTAFDPRFEGDQYRALRERLVRAPREGFAWNADHVTAVYQGGGKCGADNLRTLCVLCHAVVTKEQAKERAATRALTRTTDDPKAPQRKQIPGQRRLVRFGGGISLSQESTRNG 212
            SDKV+CL C+E  AS QG  VHRRDR+CS DCMEA+G+R+S+ SLRR+V +RD GVCS + CGRDC ALVS LKAV+ +QKRR+IL   DPRF   ++ +LRERLVR P+ G+AWNADHVTAVYQGGG+CG DNLRTLCVLCH+ VT+ Q  ERAATR + +   + +    ++  GQRRLV FGGGI+LS  S++ G
Sbjct:  920 SDKVMCLYCDEEAASEQGPPVHRRDRYCSVDCMEAHGTRTSNTSLRRLVFERDHGVCSGEGCGRDCFALVSRLKAVQHRQKRRDILMGADPRFGDQRHLSLRERLVREPKGGYAWNADHVTAVYQGGGECGVDNLRTLCVLCHSEVTRVQTTERAATRRMEK---ENRRRSLEEAQGQRRLVSFGGGIALSAGSSQTG 1114          
BLAST of mRNA_H-paniculata_contig4888.12031.1 vs. uniprot
Match: A0A6H5K8Y0_9PHAE (HNH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y0_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 1.200e-30
Identity = 65/109 (59.63%), Postives = 83/109 (76.15%), Query Frame = 0
Query:  104 DPRFEGDQYRALRERLVRAPREGFAWNADHVTAVYQGGGKCGADNLRTLCVLCHAVVTKEQAKERAATRALTRTTDDPKAPQRKQIPGQRRLVRFGGGISLSQESTRNG 212
            DPRF  +++ +LRERLVR P+ G+AWNADHVTAVYQGGG+CG DNLRTLCV+CH+ VT+ Q  ERAATR + +   + K    ++  GQRRLV FGGGI+LS  S++ G
Sbjct:    4 DPRFGDERHLSLRERLVREPKGGYAWNADHVTAVYQGGGECGVDNLRTLCVVCHSEVTRVQTTERAATRRMEK---ENKRRSLEEAQGQRRLVSFGGGIALSAVSSQTG 109          
BLAST of mRNA_H-paniculata_contig4888.12031.1 vs. uniprot
Match: A0A1D2A2E4_AUXPR (HNH domain-containing protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A2E4_AUXPR)

HSP 1 Score: 122 bits (307), Expect = 5.200e-27
Identity = 71/168 (42.26%), Postives = 98/168 (58.33%), Query Frame = 0
Query:   16 SDKVLCLLCNELAS----VQGLAVHRRDR--FCSADCMEAYGSRSSSHSLRRVVSDRDGGVCSNKSCGRDCQALVSSLKAVES-----QQKRREILTAFDPRFEGDQYRALRERLVRAPREGFAWNADHVTAVYQGGGKCGADNLRTLCVLCHAVVTKEQAKERAATR 172
            +D+ LCL C+ + +    V   A    +   FCS  C  A+  + S  ++RR +   + GVC+N  C  DC ALV+ L+ +E      +Q+RRE+L    P F     + L + L+R+  EG AW+ADHV  VYQGGG CG +NLRTLCV+CH  VT +QAK RAA R
Sbjct:  239 TDERLCLNCSSVVADAKAVPAAATLDNNYLLFCSGACEAAFALKRSGGAIRRALFRLERGVCTNPQCKLDCHALVTRLQIIEKGSAGWEQRRREVLQRLAPSFLHHGNKTLLDSLIRSAVEGNAWHADHVIPVYQGGGGCGIENLRTLCVVCHKKVTADQAKARAAER 406          
BLAST of mRNA_H-paniculata_contig4888.12031.1 vs. uniprot
Match: A0A1D2AFE3_AUXPR (Uncharacterized protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AFE3_AUXPR)

HSP 1 Score: 122 bits (307), Expect = 2.920e-26
Identity = 71/168 (42.26%), Postives = 98/168 (58.33%), Query Frame = 0
Query:   16 SDKVLCLLCNELAS----VQGLAVHRRDR--FCSADCMEAYGSRSSSHSLRRVVSDRDGGVCSNKSCGRDCQALVSSLKAVES-----QQKRREILTAFDPRFEGDQYRALRERLVRAPREGFAWNADHVTAVYQGGGKCGADNLRTLCVLCHAVVTKEQAKERAATR 172
            +D+ LCL C+ + +    V   A    +   FCS  C  A+  + S  ++RR +   + GVC+N  C  DC ALV+ L+ +E      +Q+RRE+L    P F     + L + L+R+  EG AW+ADHV  VYQGGG CG +NLRTLCV+CH  VT +QAK RAA R
Sbjct: 1011 TDERLCLNCSSVVADAKAVPAAATLDNNYLLFCSGACEAAFALKRSGGAIRRALFRLERGVCTNPQCKLDCHALVTRLQIIEKGSAGWEQRRREVLQRLAPSFLHHGNKTLLDSLIRSAVEGNAWHADHVIPVYQGGGGCGIENLRTLCVVCHKKVTADQAKARAAER 1178          
BLAST of mRNA_H-paniculata_contig4888.12031.1 vs. uniprot
Match: A0A2P6VMR8_9CHLO (DNA annealing helicase and endonuclease ZRANB3 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VMR8_9CHLO)

HSP 1 Score: 122 bits (306), Expect = 4.140e-26
Identity = 68/137 (49.64%), Postives = 84/137 (61.31%), Query Frame = 0
Query:   41 FCSADCMEAYGSRSSSHSLRRVVSDRDGGVCSNKSCGRDCQALVSSLKAVES-----QQKRREILTAFDPRFEGDQYRALRERLVRAPREGFAWNADHVTAVYQGGGKCGADNLRTLCVLCHAVVTKEQAKERAATR 172
            FC  +C   +G +S+  + RR V   + GVC   +C  DC  LV  L+AVE      +++RR I+ A  PR     Y+A  + LVR   EG AW ADHV  VY+GGG C  DNLRTLCV CHA VTKEQAKERAAT+
Sbjct:  854 FCGGECERRFGLKSNGSAYRRAVFKLERGVC--VACKLDCHKLVKRLQAVEKGSRGWEEQRRRIIAARAPRLMARGYKAYLDVLVRRAVEGNAWQADHVVPVYKGGGLCDVDNLRTLCVACHADVTKEQAKERAATK 988          
BLAST of mRNA_H-paniculata_contig4888.12031.1 vs. uniprot
Match: A0A2P6TJS2_CHLSO (DNA annealing helicase and endonuclease ZRANB3 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TJS2_CHLSO)

HSP 1 Score: 120 bits (301), Expect = 1.690e-25
Identity = 66/137 (48.18%), Postives = 83/137 (60.58%), Query Frame = 0
Query:   41 FCSADCMEAYGSRSSSHSLRRVVSDRDGGVCSNKSCGRDCQALVSSLKAVES-----QQKRREILTAFDPRFEGDQYRALRERLVRAPREGFAWNADHVTAVYQGGGKCGADNLRTLCVLCHAVVTKEQAKERAATR 172
            FCS +C   +  +S+  + RR +   + G+C   SC  DC  LV  L+AVE      +++RR I+ A  PRF    Y+A  + LVR   EG AW ADH+  VY+GGG C  DNLRTLCV CHA VTK Q KERAATR
Sbjct: 1011 FCSGECEGRFALKSNGSAYRRALFKLERGIC--VSCRLDCHTLVKRLQAVEKGSRGWEEQRRRIIAARAPRFMARGYKAYLDALVRRAVEGNAWQADHILPVYKGGGLCDVDNLRTLCVACHADVTKAQTKERAATR 1145          
BLAST of mRNA_H-paniculata_contig4888.12031.1 vs. uniprot
Match: A0A2P5D6G8_PARAD (SNF2/helicase/HNH domain-containing protein n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5D6G8_PARAD)

HSP 1 Score: 120 bits (301), Expect = 1.690e-25
Identity = 69/169 (40.83%), Postives = 96/169 (56.80%), Query Frame = 0
Query:    7 KEITTACAQSDKVLCLLCNELASVQGLAVHR--RDRFCSADCMEAYGSRSSSHSLRRVVSDRDGGVCSNKSCGRDCQALVSSLKAVESQQKRREILTAFDPRFEGDQYRALRERLVRAPREGFAWNADHVTAVYQGGGKCGADNLRTLCVLCHAVVTKEQAKERAATRA 173
            KE T     +D+ LC LC E              D FC+ +C E Y  R+S+ SLR+ +   + G+C+N  C  DC  LV  ++ + S   RRE +    PR      R LR++L++ P+EG AW+ADH+  VY+GGG+C  +N+RTLCV CH+ VTK Q  ER  TRA
Sbjct:  950 KEYTQGWTLNDEPLCKLCQEPCKSSNAMEPEFFEDLFCNLECYEEYRIRTSNRSLRQELFQLENGICTN--CQLDCHKLVVHIRPL-SLAMRREHIEKVAPRIASR--RKLRDKLIKDPKEGNAWHADHIVPVYRGGGECKLENMRTLCVACHSDVTKAQCAERRLTRA 1113          
BLAST of mRNA_H-paniculata_contig4888.12031.1 vs. uniprot
Match: A0A5B8MJL2_9CHLO (SNF2-like DNA helicase n=3 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MJL2_9CHLO)

HSP 1 Score: 120 bits (300), Expect = 2.210e-25
Identity = 80/204 (39.22%), Postives = 111/204 (54.41%), Query Frame = 0
Query:    3 SSHGKEITTACAQ--SDKVLCLLCNELASVQGLAVHRRDRFCSADCMEAYGSRSSSHSLRRVVSDRDGGVCSNKSCGRDCQALVSSLKAV-----------ESQQKRREILTAFDPRFEGDQYRALRERLVRAPREGFAWNADHVTAVYQGGGKCGADNLRTLCVLCHAVVTKEQAKERAATRALTRTTDDPKAPQRKQIPGQR 193
            SS G+++ + C +  +  +    C E   V  +   +RD +CS+ C +     SSS  +RR + + + GVC  ++C  DC  LV +L+AV           E+ ++RR+IL A+   F    + ALRERL+  P EG AW ADHV AV+QGGG  G DN+RTLCV CH  VT EQAK RA  R   R   DP  P   +   +R
Sbjct:  840 SSTGEKLCSLCMKPSASAIGPTACREAGDVLYIT-SKRDLYCSSTCYDRASLSSSSSYVRRKLREIEKGVC--QTCSLDCIKLVGALRAVKPKGKSALDLKEAVEERRKILYAYSETFSRRGFGALRERLLMQPIEGNAWQADHVVAVFQGGGCAGLDNMRTLCVCCHKEVTAEQAKLRARERRQ-RLGLDPNPPSTNRKANKR 1039          
BLAST of mRNA_H-paniculata_contig4888.12031.1 vs. uniprot
Match: A0A7R9V8N2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V8N2_9CHLO)

HSP 1 Score: 110 bits (275), Expect = 1.070e-24
Identity = 62/141 (43.97%), Postives = 81/141 (57.45%), Query Frame = 0
Query:   41 FCSADCMEAYGSRSSSHSLRRVVSDRDGGVCSNKSCGRDCQALVSSLKAV-----ESQQKRREILTAFDPRFEGDQYRALRERLVRAPREGFAWNADHVTAVYQGGGKCGADNLRTLCVLCHAVVTKEQAKERAATRALTR 176
            FC A C   +  ++SS S+RR +   + GVC    C  DC+ALV  L+ +     + Q KR+ I+    P+      RA  +RLV +P EG AW+ADH+  VY+GGG CG +NLRTLCV CH  VT  Q K RAA R   R
Sbjct:   54 FCCAACEARHSLKASSGSIRRALGRLERGVCVQ--CRLDCRALVQQLQCIRYGSTDWQAKRKAIVARMAPQLLHRGLRAALDRLVASPTEGAAWHADHIRPVYEGGGLCGLENLRTLCVACHHAVTAAQCKARAAERTRRR 192          
BLAST of mRNA_H-paniculata_contig4888.12031.1 vs. uniprot
Match: A0A5J4Y511_9CHLO (SNF2 family DNA-dependent ATPase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y511_9CHLO)

HSP 1 Score: 118 bits (295), Expect = 1.110e-24
Identity = 71/175 (40.57%), Postives = 95/175 (54.29%), Query Frame = 0
Query:   39 DRFCSADCMEAYGSRSSSHSLRRVVSDRDGGVCSNKSCGRDCQALVSSLKAVES---------------QQKRREILTAFDPRFEGDQYRALRERLVRAPREGFAWNADHVTAVYQGGGKCGADNLRTLCVLCHAVVTKEQAKERAATRALTRTTDDPKAPQRKQIPGQRRLVRF 198
            D FC ADC   + +RSS  +LRR +   + GVC+  SCG DC ALV+ ++   +                ++RR  +  + P F     +A  +RLV+   EG AW+ADH+ AVYQGGG C  +NLRTLCV+CH  VTK+QAKERA  R              +Q+ GQ  L RF
Sbjct: 1326 DLFCGADCEGKFCTRSSGGALRRALFRLERGVCT--SCGLDCHALVNKVRQAATGGSMNLMIERGSHKCDERRRARILTYAPTFGRHGSKAYLDRLVKQAVEGNAWHADHIVAVYQGGGLCDLENLRTLCVICHQDVTKQQAKERAVAR--------------RQVAGQGTLDRF 1484          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4888.12031.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJH7_ECTSI1.120e-6562.12Chromatin remodeling complex subunit n=1 Tax=Ectoc... [more]
A0A6H5K8Y0_9PHAE1.200e-3059.63HNH domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A1D2A2E4_AUXPR5.200e-2742.26HNH domain-containing protein n=1 Tax=Auxenochlore... [more]
A0A1D2AFE3_AUXPR2.920e-2642.26Uncharacterized protein n=3 Tax=Auxenochlorella pr... [more]
A0A2P6VMR8_9CHLO4.140e-2649.64DNA annealing helicase and endonuclease ZRANB3 n=1... [more]
A0A2P6TJS2_CHLSO1.690e-2548.18DNA annealing helicase and endonuclease ZRANB3 n=1... [more]
A0A2P5D6G8_PARAD1.690e-2540.83SNF2/helicase/HNH domain-containing protein n=2 Ta... [more]
A0A5B8MJL2_9CHLO2.210e-2539.22SNF2-like DNA helicase n=3 Tax=Chloropicon primus ... [more]
A0A7R9V8N2_9CHLO1.070e-2443.97Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
A0A5J4Y511_9CHLO1.110e-2440.57SNF2 family DNA-dependent ATPase n=1 Tax=Trebouxia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR45766FAMILY NOT NAMEDcoord: 17..175
NoneNo IPR availablePANTHERPTHR45766:SF5DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3coord: 17..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4888contigH-paniculata_contig4888:6129..13639 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4888.12031.1mRNA_H-paniculata_contig4888.12031.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4888 5737..13746 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4888.12031.1 ID=prot_H-paniculata_contig4888.12031.1|Name=mRNA_H-paniculata_contig4888.12031.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=435bp
MTSSHGKEITTACAQSDKVLCLLCNELASVQGLAVHRRDRFCSADCMEAY
GSRSSSHSLRRVVSDRDGGVCSNKSCGRDCQALVSSLKAVESQQKRREIL
TAFDPRFEGDQYRALRERLVRAPREGFAWNADHVTAVYQGGGKCGADNLR
TLCVLCHAVVTKEQAKERAATRALTRTTDDPKAPQRKQIPGQRRLVRFGG
GISLSQESTRNGKASPSSPNRADGTLADEDDQDLMLSEKDRDKDMDDMGS
SSDDDVVVLKSATSRTKGLTTTGKRETTPRTSTSNSRHQSQSRGEVGRTC
ISGGGVSKGGDSHRLQANKTGSMLPAEYGLRDYFERLVSGADLFEASPCA
TPSSMRRSDGSVGKDSSVDSASGALGGAGLGARDGSDGGTFSFTRVRRLK
KPTERSVASSGAARASCFALENRSSSDSDGSGSA*
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