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Homology
BLAST of mRNA_H-paniculata_contig4888.12031.1 vs. uniprot
Match: D8LJH7_ECTSI (Chromatin remodeling complex subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH7_ECTSI) HSP 1 Score: 238 bits (607), Expect = 8.420e-64 Identity = 123/198 (62.12%), Postives = 153/198 (77.27%), Query Frame = 3
Query: 153 SDKVLCLLCNE-LASVQGLAVHRRDRFCSADCMEAYGSRSSSHSLRRVVSDRDGGVCSNKSCGRDCQALVSSLKAVESQQKRREILTAFDPRFEGDQYRALRERLVRAPREGFAWNADHVTAVYQGGGKCGADNLRTLCVLCHAVVTKEQAKERAATRALTRTTDDPKAPQRKQIPGQRRLVRFGGGISLSQESTRNG 743
SDKV+CL C+E AS QG VHRRDR+CS DCMEA+G+R+S+ SLRR+V +RD GVCS + CGRDC ALVS LKAV+ +QKRR+IL DPRF ++ +LRERLVR P+ G+AWNADHVTAVYQGGG+CG DNLRTLCVLCH+ VT+ Q ERAATR + + + + ++ GQRRLV FGGGI+LS S++ G
Sbjct: 920 SDKVMCLYCDEEAASEQGPPVHRRDRYCSVDCMEAHGTRTSNTSLRRLVFERDHGVCSGEGCGRDCFALVSRLKAVQHRQKRRDILMGADPRFGDQRHLSLRERLVREPKGGYAWNADHVTAVYQGGGECGVDNLRTLCVLCHSEVTRVQTTERAATRRMEK---ENRRRSLEEAQGQRRLVSFGGGIALSAGSSQTG 1114
BLAST of mRNA_H-paniculata_contig4888.12031.1 vs. uniprot
Match: A0A6H5K8Y0_9PHAE (HNH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y0_9PHAE) HSP 1 Score: 129 bits (324), Expect = 8.090e-30 Identity = 65/109 (59.63%), Postives = 83/109 (76.15%), Query Frame = 3
Query: 417 DPRFEGDQYRALRERLVRAPREGFAWNADHVTAVYQGGGKCGADNLRTLCVLCHAVVTKEQAKERAATRALTRTTDDPKAPQRKQIPGQRRLVRFGGGISLSQESTRNG 743
DPRF +++ +LRERLVR P+ G+AWNADHVTAVYQGGG+CG DNLRTLCV+CH+ VT+ Q ERAATR + + + K ++ GQRRLV FGGGI+LS S++ G
Sbjct: 4 DPRFGDERHLSLRERLVREPKGGYAWNADHVTAVYQGGGECGVDNLRTLCVVCHSEVTRVQTTERAATRRMEK---ENKRRSLEEAQGQRRLVSFGGGIALSAVSSQTG 109
BLAST of mRNA_H-paniculata_contig4888.12031.1 vs. uniprot
Match: A0A1D2A2E4_AUXPR (HNH domain-containing protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A2E4_AUXPR) HSP 1 Score: 122 bits (307), Expect = 3.010e-26 Identity = 71/168 (42.26%), Postives = 98/168 (58.33%), Query Frame = 3
Query: 153 SDKVLCLLCNELAS----VQGLAVHRRDR--FCSADCMEAYGSRSSSHSLRRVVSDRDGGVCSNKSCGRDCQALVSSLKAVES-----QQKRREILTAFDPRFEGDQYRALRERLVRAPREGFAWNADHVTAVYQGGGKCGADNLRTLCVLCHAVVTKEQAKERAATR 623
+D+ LCL C+ + + V A + FCS C A+ + S ++RR + + GVC+N C DC ALV+ L+ +E +Q+RRE+L P F + L + L+R+ EG AW+ADHV VYQGGG CG +NLRTLCV+CH VT +QAK RAA R
Sbjct: 239 TDERLCLNCSSVVADAKAVPAAATLDNNYLLFCSGACEAAFALKRSGGAIRRALFRLERGVCTNPQCKLDCHALVTRLQIIEKGSAGWEQRRREVLQRLAPSFLHHGNKTLLDSLIRSAVEGNAWHADHVIPVYQGGGGCGIENLRTLCVVCHKKVTADQAKARAAER 406
BLAST of mRNA_H-paniculata_contig4888.12031.1 vs. uniprot
Match: A0A1D2AFE3_AUXPR (Uncharacterized protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AFE3_AUXPR) HSP 1 Score: 122 bits (307), Expect = 2.370e-25 Identity = 71/168 (42.26%), Postives = 98/168 (58.33%), Query Frame = 3
Query: 153 SDKVLCLLCNELAS----VQGLAVHRRDR--FCSADCMEAYGSRSSSHSLRRVVSDRDGGVCSNKSCGRDCQALVSSLKAVES-----QQKRREILTAFDPRFEGDQYRALRERLVRAPREGFAWNADHVTAVYQGGGKCGADNLRTLCVLCHAVVTKEQAKERAATR 623
+D+ LCL C+ + + V A + FCS C A+ + S ++RR + + GVC+N C DC ALV+ L+ +E +Q+RRE+L P F + L + L+R+ EG AW+ADHV VYQGGG CG +NLRTLCV+CH VT +QAK RAA R
Sbjct: 1011 TDERLCLNCSSVVADAKAVPAAATLDNNYLLFCSGACEAAFALKRSGGAIRRALFRLERGVCTNPQCKLDCHALVTRLQIIEKGSAGWEQRRREVLQRLAPSFLHHGNKTLLDSLIRSAVEGNAWHADHVIPVYQGGGGCGIENLRTLCVVCHKKVTADQAKARAAER 1178
BLAST of mRNA_H-paniculata_contig4888.12031.1 vs. uniprot
Match: A0A2P6VMR8_9CHLO (DNA annealing helicase and endonuclease ZRANB3 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VMR8_9CHLO) HSP 1 Score: 122 bits (306), Expect = 3.400e-25 Identity = 68/137 (49.64%), Postives = 84/137 (61.31%), Query Frame = 3
Query: 228 FCSADCMEAYGSRSSSHSLRRVVSDRDGGVCSNKSCGRDCQALVSSLKAVES-----QQKRREILTAFDPRFEGDQYRALRERLVRAPREGFAWNADHVTAVYQGGGKCGADNLRTLCVLCHAVVTKEQAKERAATR 623
FC +C +G +S+ + RR V + GVC +C DC LV L+AVE +++RR I+ A PR Y+A + LVR EG AW ADHV VY+GGG C DNLRTLCV CHA VTKEQAKERAAT+
Sbjct: 854 FCGGECERRFGLKSNGSAYRRAVFKLERGVC--VACKLDCHKLVKRLQAVEKGSRGWEEQRRRIIAARAPRLMARGYKAYLDVLVRRAVEGNAWQADHVVPVYKGGGLCDVDNLRTLCVACHADVTKEQAKERAATK 988
BLAST of mRNA_H-paniculata_contig4888.12031.1 vs. uniprot
Match: A0A2P6TJS2_CHLSO (DNA annealing helicase and endonuclease ZRANB3 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TJS2_CHLSO) HSP 1 Score: 120 bits (301), Expect = 1.270e-24 Identity = 66/137 (48.18%), Postives = 83/137 (60.58%), Query Frame = 3
Query: 228 FCSADCMEAYGSRSSSHSLRRVVSDRDGGVCSNKSCGRDCQALVSSLKAVES-----QQKRREILTAFDPRFEGDQYRALRERLVRAPREGFAWNADHVTAVYQGGGKCGADNLRTLCVLCHAVVTKEQAKERAATR 623
FCS +C + +S+ + RR + + G+C SC DC LV L+AVE +++RR I+ A PRF Y+A + LVR EG AW ADH+ VY+GGG C DNLRTLCV CHA VTK Q KERAATR
Sbjct: 1011 FCSGECEGRFALKSNGSAYRRALFKLERGIC--VSCRLDCHTLVKRLQAVEKGSRGWEEQRRRIIAARAPRFMARGYKAYLDALVRRAVEGNAWQADHILPVYKGGGLCDVDNLRTLCVACHADVTKAQTKERAATR 1145
BLAST of mRNA_H-paniculata_contig4888.12031.1 vs. uniprot
Match: A0A7R9V8N2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V8N2_9CHLO) HSP 1 Score: 110 bits (275), Expect = 3.750e-24 Identity = 62/141 (43.97%), Postives = 81/141 (57.45%), Query Frame = 3
Query: 228 FCSADCMEAYGSRSSSHSLRRVVSDRDGGVCSNKSCGRDCQALVSSLKAV-----ESQQKRREILTAFDPRFEGDQYRALRERLVRAPREGFAWNADHVTAVYQGGGKCGADNLRTLCVLCHAVVTKEQAKERAATRALTR 635
FC A C + ++SS S+RR + + GVC C DC+ALV L+ + + Q KR+ I+ P+ RA +RLV +P EG AW+ADH+ VY+GGG CG +NLRTLCV CH VT Q K RAA R R
Sbjct: 54 FCCAACEARHSLKASSGSIRRALGRLERGVCVQ--CRLDCRALVQQLQCIRYGSTDWQAKRKAIVARMAPQLLHRGLRAALDRLVASPTEGAAWHADHIRPVYEGGGLCGLENLRTLCVACHHAVTAAQCKARAAERTRRR 192
BLAST of mRNA_H-paniculata_contig4888.12031.1 vs. uniprot
Match: A0A2P5D6G8_PARAD (SNF2/helicase/HNH domain-containing protein n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5D6G8_PARAD) HSP 1 Score: 119 bits (297), Expect = 3.970e-24 Identity = 69/169 (40.83%), Postives = 96/169 (56.80%), Query Frame = 3
Query: 126 KEITTACAQSDKVLCLLCNELASVQGLAVHR--RDRFCSADCMEAYGSRSSSHSLRRVVSDRDGGVCSNKSCGRDCQALVSSLKAVESQQKRREILTAFDPRFEGDQYRALRERLVRAPREGFAWNADHVTAVYQGGGKCGADNLRTLCVLCHAVVTKEQAKERAATRA 626
KE T +D+ LC LC E D FC+ +C E Y R+S+ SLR+ + + G+C+N C DC LV ++ + S RRE + PR R LR++L++ P+EG AW+ADH+ VY+GGG+C +N+RTLCV CH+ VTK Q ER TRA
Sbjct: 950 KEYTQGWTLNDEPLCKLCQEPCKSSNAMEPEFFEDLFCNLECYEEYRIRTSNRSLRQELFQLENGICTN--CQLDCHKLVVHIRPL-SLAMRREHIEKVAPRIASR--RKLRDKLIKDPKEGNAWHADHIVPVYRGGGECKLENMRTLCVACHSDVTKAQCAERRLTRA 1113
BLAST of mRNA_H-paniculata_contig4888.12031.1 vs. uniprot
Match: A0A5B8MJL2_9CHLO (SNF2-like DNA helicase n=3 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MJL2_9CHLO) HSP 1 Score: 118 bits (295), Expect = 6.720e-24 Identity = 73/168 (43.45%), Postives = 96/168 (57.14%), Query Frame = 3
Query: 216 RRDRFCSADCMEAYGSRSSSHSLRRVVSDRDGGVCSNKSCGRDCQALVSSLKAV-----------ESQQKRREILTAFDPRFEGDQYRALRERLVRAPREGFAWNADHVTAVYQGGGKCGADNLRTLCVLCHAVVTKEQAKERAATRALTRTTDDPKAPQRKQIPGQR 686
+RD +CS+ C + SSS +RR + + + GVC ++C DC LV +L+AV E+ ++RR+IL A+ F + ALRERL+ P EG AW ADHV AV+QGGG G DN+RTLCV CH VT EQAK RA R R DP P + +R
Sbjct: 875 KRDLYCSSTCYDRASLSSSSSYVRRKLREIEKGVC--QTCSLDCIKLVGALRAVKPKGKSALDLKEAVEERRKILYAYSETFSRRGFGALRERLLMQPIEGNAWQADHVVAVFQGGGCAGLDNMRTLCVCCHKEVTAEQAKLRARERRQ-RLGLDPNPPSTNRKANKR 1039
BLAST of mRNA_H-paniculata_contig4888.12031.1 vs. uniprot
Match: A0A5J4Y511_9CHLO (SNF2 family DNA-dependent ATPase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y511_9CHLO) HSP 1 Score: 118 bits (295), Expect = 8.170e-24 Identity = 71/175 (40.57%), Postives = 95/175 (54.29%), Query Frame = 3
Query: 222 DRFCSADCMEAYGSRSSSHSLRRVVSDRDGGVCSNKSCGRDCQALVSSLKAVES---------------QQKRREILTAFDPRFEGDQYRALRERLVRAPREGFAWNADHVTAVYQGGGKCGADNLRTLCVLCHAVVTKEQAKERAATRALTRTTDDPKAPQRKQIPGQRRLVRF 701
D FC ADC + +RSS +LRR + + GVC+ SCG DC ALV+ ++ + ++RR + + P F +A +RLV+ EG AW+ADH+ AVYQGGG C +NLRTLCV+CH VTK+QAKERA R +Q+ GQ L RF
Sbjct: 1326 DLFCGADCEGKFCTRSSGGALRRALFRLERGVCT--SCGLDCHALVNKVRQAATGGSMNLMIERGSHKCDERRRARILTYAPTFGRHGSKAYLDRLVKQAVEGNAWHADHIVAVYQGGGLCDLENLRTLCVICHQDVTKQQAKERAVAR--------------RQVAGQGTLDRF 1484
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 240.4 |
| Seed ortholog evalue | 1.6e-60 |
| Seed eggNOG ortholog | 2880.D8LJH7 |
| KEGG ko | ko:K10876,ko:K14440 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000018,GO:0000228,GO:0000733,GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005657,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0008156,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010556,GO:0010558,GO:0010605,GO:0016043,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0017111,GO:0019219,GO:0019222,GO:0031297,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031593,GO:0031974,GO:0031981,GO:0032392,GO:0033554,GO:0034641,GO:0034645,GO:0036292,GO:0036310,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0045005,GO:0045910,GO:0045934,GO:0046483,GO:0048478,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051276,GO:0051716,GO:0060255,GO:0065007,GO:0070013,GO:0070530,GO:0071103,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0097159,GO:0097617,GO:0140030,GO:0140097,GO:1901360,GO:1901363,GO:1901576,GO:2000104,GO:2000112,GO:2000113 |
| EggNOG free text desc. | annealing helicase activity |
| EggNOG OGs | COG0553@1,KOG1000@2759 |
| EC | 3.6.4.12 |
| COG Functional cat. | L |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko03036,ko03400 |
| Exons | 6 |
| Model size | 1804 |
| Cds size | 1305 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4888.12031.1 >prot_H-paniculata_contig4888.12031.1 ID=prot_H-paniculata_contig4888.12031.1|Name=mRNA_H-paniculata_contig4888.12031.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=435bp
MTSSHGKEITTACAQSDKVLCLLCNELASVQGLAVHRRDRFCSADCMEAY
GSRSSSHSLRRVVSDRDGGVCSNKSCGRDCQALVSSLKAVESQQKRREIL
TAFDPRFEGDQYRALRERLVRAPREGFAWNADHVTAVYQGGGKCGADNLR
TLCVLCHAVVTKEQAKERAATRALTRTTDDPKAPQRKQIPGQRRLVRFGG
GISLSQESTRNGKASPSSPNRADGTLADEDDQDLMLSEKDRDKDMDDMGS
SSDDDVVVLKSATSRTKGLTTTGKRETTPRTSTSNSRHQSQSRGEVGRTC
ISGGGVSKGGDSHRLQANKTGSMLPAEYGLRDYFERLVSGADLFEASPCA
TPSSMRRSDGSVGKDSSVDSASGALGGAGLGARDGSDGGTFSFTRVRRLK
KPTERSVASSGAARASCFALENRSSSDSDGSGSA* back to topmRNA from alignment at H-paniculata_contig4888:5737..13746- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4888.12031.1 ID=mRNA_H-paniculata_contig4888.12031.1|Name=mRNA_H-paniculata_contig4888.12031.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8010bp|location=Sequence derived from alignment at H-paniculata_contig4888:5737..13746- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCACCCAACGATACTCGGACCGCCTCACCGGAGGAGTGAAGGCCACGGCT
GGCAGTGAATGGATCATTGCTGATGCTACCAGTGGATCGGCGGCGGGAAC
ATGGCCAATGACGTCATCGCATGGAAAGGAGATCACCACCGCCTGTGCAC
AATCAGACAAGGTAAGGAAGGTACTGTACTCTCAGCTCTGTTCTGCTAAA
CTGTTGCAGTACTGTCTCGTTGCGGCTCCTTCAGTCTGTAGTAGTAGTAG
ACTGTTTTGGGAGATTGGTGAAGTATGTACGAGGTTATCCTGTAAGGAGG
AAATAAATGTAACTTTGATATTCAGTGAGGTAAACACATGGTGGTGTGCC
CGCTAATGTGAACTTCCATGCACTTGGTTTTATGATATTTGCTTTTGAAT
CCAAGGAGAAATGTTCGTAATTGTGTTGAAGTAAAACTGATGTCTCCTTC
TAAAACGGTTGAGGCTATTAATTGTCCGCCACAGCAAACATATTACCACG
GTGTCTTAACGTTTGGCACCGACATTACCCGTTAATGCACCTTTGTTATC
ACCGGCGCATTGTGTTCAGTGTACTGCTGCTGCTCCTGCTGCTGCATGTG
AATGTGTTTTGGACCGCTGCGTTTGTTCTGATGATGTAATCAAGTTTTCT
TCAACTTATATAGATCCAATGGACAAGATTGATAGACAAGAAGACCGTGT
TCTGAGTGACTAAAAACCCGTTAGCAAAGCTAACTGGTATTGAGTCGTAA
TGTGAGTATCTACGTTCTGTCAAATTCAATCATGCCGTCCTGGACAACAA
GCTGTAGAGCTGTAAGTCATTATTGAAGTTACTTGGTACCAGCTTTCACT
TTTTTTATTCCATTAAATCACTGATTTAGCCAACATATTCGAAACACATC
CCTTGGAACCACATCCCTTGGAACCACATCCCGTGGAACTACATCCCTTG
GAACCACCCGGAATGTAGGCAACCCATACTGTTTGAATGCAGAAAGAGCT
TTATACCTCAGTGTAAGTAAATGTCAAAATTGGTTAAACTCGCTGTGAGA
GACCCAAAACCAGCCAAGATGATGGGATAACTGGTTCCGCGACGATATTA
CACTTGAGCTAGAACTATATTTTTATGTATTATGAGTGGGACTATCCCAG
CTATTCTCTTCTCTTGTGTAGTTTCCCGGTCGATGTATCGCTGGTAGTGG
CGCCGGTGCCATTGACGTGGTAAATGGATCCTCAAGGATTTATGCAGTTT
CACGTTACAGCTGGCGTTTGTAGCACGAGGAACTCATAGCGTACGCTATC
CAGATGCCGTGTCTTCTGCCGTAACTGCCACAATAACGCTCCAAGAGCTG
GTGCCATTGATTCGGGAGCCCACCAACCTATGCCTGCAAGCACTGTTTAT
GCTGTGGTTCTATGTACCGTGCCTGTAGCATCGTGGAGAAGATTTTGTTT
TGTGTTGCAATCCTAGTCGTTAGACCGATCTTCCTGTTCTTTCTCAGAGG
ATATCAGAGGGAAAATGTTGCCGGCGAATCCTGTAACTGCAGCTTAACAT
ATTGTGATACCAATACTCGATACTAGTAGAGAGGCACGGGCACGGCCGTT
CAGTCCGTGTCGTAGATGAAGCAAGAGTCAATACAGTCCAGAGTTTGCTG
GTGTGGAAAGTACGTGGGTGTGGTCCTGCCCTGTCCATTTTTGCACCGCC
ATGAACCGCTGCTTGATACATGTAGAAGAATGAATTCTGACAAGGTCCTT
TTTTCACTTGCGCCGCCGATCGACTTGATTGCATTACATTGTATTACCCC
TCATCCAGGTACTGTGTCTCCTCTGCAATGAGCTTGCCAGCGTTCAAGGG
CTGGCGGTTCACCGACGAGATCGCTTCTGCAGCGCGGACTGCATGGAGGT
CTGTCCGTCCTATTGCCTATTTTATTTTTTTTATGTAGAGGAGCCGCTGT
GATTCTGCGATGCATTGGAAATGAAATGAAAGTGATGGGGCTGAGGCTCA
TGCCTGTCTGAGTCGTATCATTAACAATTATTATTCAGAATTCTAGGTTG
AGATTGAAATATTGCTACCTGCTCCCGTTGGTGACCTGTTTCGTCGAGGC
ATGTACATATGTATACATGTTTACCTTCCGACAAATGCACACCTCAGATA
CAGATAATAGTATTCCCTTTGCAACAGATGAGAAATTAATCAAACATCTT
ACAGACCGAGAAGGACTGTAATGGAGTATAATATATATGCTGTATTGGTA
TGATGTGCTGACCTTGGTGTCGAAGCCGTCGTAGTCTATTTATCGTCGAT
AATTGCCGCGTCAGCAACTTTGGGGAAACACTAGGTGTGCTGCAGAGGCT
TGAATTTTGTACTTTTTTCTGCATCAATGAACATGTGGAATTGAGTGCTG
AAGACTGGCTATATCTTGCGATCGGTGGAGGTTCGCTGAAACATGTGCGT
ATCAATAGAAATCCCTATGTTTCACCTTTCTCCTGGATGTCTCCACTTGA
CTTCAAAGGTGGTTAGCATACCCAAGTGGTCGATTTGCCTGCTCAGTTCA
TGCAGTTGTCGGGTTCAGCTCTGCACCGTCGTCTATGTTCTGATGAACTC
GGATAACCTGGCCAACGATCATACTCGATGTCTATTCGAATGCCGTGCAT
CCTAGATTGTTGGAACGTTTGTCGTTTGACCTGCATGTCTTGCAATCTCT
TATTTGGCTTCTTTTCTCCGGTATGGGAACGTTTCGATAAGCTCGTGAGG
CAAATTCGTGTGTGTAGGTGTGTGTGTATTTTTCTTTGACACATGTTCGG
ATTTCAGGAACGAGAAAAACGGCCTGTGGCTATAATAATATAAGCCCTAC
ACTAAATGTACTGTACTCCGCTACGTGGCATATCTGCAGAATAGAGTAGC
GCGGTCCACTCGCGACATATCAAATGACGCGGAAGATTCCCGTTGATGTT
GTTTTTACATACATATATGTGAGTAATAGTTGCTCATTTCAACTCGTGGA
GTACCAAAACAATACATGAATATCCATGTCTCAAATTCAAGAAGTGAATA
CCCCAAACCGAAACATGCAAGCCCAAACCAAAGGTTCGGGAAGAAAGTGT
TCGACTTTCCTGCGTTTTTTTTTGTGATATTCACAGGAAGGCATGTGATC
GTTTAGAGGAACATGCAGTTGTCACCGGCCTGAGTTTTCCAAAGGTTCCA
GCCACGCTTTTAAGCTTCGAGTATTCAATCGGGAAGTACGAAGAACACAT
GGTGTGCGCTCTGTCCAATGAATTCCCGCAAATCGATCGGAATATTGACC
ATCTACGGTATTTTTAATCCCACAGTACGGTGCTTTCAGACAAAAGAGTC
CCGTACAATGTACAATGTTAGCACAGGTTGAAACTTATCCGCCGCGCCAT
ACGTGGCAAATGAACAGTAAAATTTATCTACAAGCGGAACAGTGAAGGCC
ACAGAAACACACTAAAACAGTAAAAAAAAAAATGTTTTTCCCAGGAGACC
AGCGAGAACCTTTACTGATACCTGTACTGACATGTCAAGTCACGGCTTTA
TTAGGCTAATTCTATTATCATTTCTCTATAAACTTTTCCCCAACCGATGT
ATGTCTCGGAGGGGTCAAATGCACGGGAAGCGTAGGACTAGGGTTAAGAA
TGAGACCCGCACCCATTAATACCTCTCAGGCGCCTACTAGATGTCCAGTA
CACTTACTACTCTACCCATTTGGGTTTTGGCCCGTCAACACATGGAAACA
ATTTTATAGCTCCTCTGCACACACCCCGCACAATCCTTCGGGGATGGCAT
ACATTTATCAACTCCTGGTCATATGTATGACAAGTCGGTCATGCGGTGTG
CCTTGCACTACTGTAGTATTGCACAGATATCATGTGTTCGGATGCCGCTT
CGTTCGTGACATGGCAGGTCAATTATGTAGAAAGATTCATTCCAACGCGG
CATCACTGAGTTGGATTGCGACTAGAGAGCCACTGTATGACTATGGAGTT
ATCTGGGTGTACGGCAGGTTTTTTGTCGATGTGGCCGGTTATTGGTAACT
AGAATGTTGATATTTTTACCCTTGCCATTTGAACGTTTGGACAGGCGTAC
GGGTCACGGAGCAGCAGCCATTCTCTTCGACGGGTGGTATCTGACAGGGA
TGGGGGAGTGTGCAGCAACAAGTCCTGCGGAAGAGATTGCCAGGCGTTGG
TTTCCAGTCTCAAGGCTGTGGAAAGCCAGCAGGTACTCTCTGTGCATATA
TGGTGTATACTGTATACAGGTGTGGGATGTGGTGAATTAGTGTGCACCGT
TTAGGAGAGTATCCTATAGAATGGGTAAAGTACCGCAATTGTCTGTAGAG
GACAACAATACCTTTTTCGCACCGTAGCTCATTTGATGTCGCTATTTGGG
TGGGGCATGACGAGTCGATTACCTCAGAGAGAGAGGTTACTGCGGTTCAG
GAAAGGCACGTCGCGGTTTCAGATTTAGAGCAAATGACGTTGATTGCTGC
ATCAAGCGCGGAATAGGCACATGTCAAAAGTGCCTGCTGATCAGTATTTT
GTACCGGTACGTCACAATGTGTGTTTCGTCGCCTGAAGCCGATGTCGGAT
ACAGGCCACATGAGGGGGGTTATGAGCGAGATGGATACATGGGAGACAGA
CACACTCCGCGCAAAGCCCGCATAATTTGTCATCGTGAATGCTACTATAG
CTTTAGTCGTTCCAGAATTGATAACGGAATGACGTAGGAGTGGCGCCTTA
TCAATATGTCTCGTGTGGAGCATTTCAGCAAAGCCTAAGGGTGTGATTGA
TTGTATTAACTTCCTTGCATAATGATGAGAAAGAACTTGCTTTTTGTTCC
CCCTTGGGTGCACGCACAACCAATTGAACACAATAATATGCACCATGAGT
AAGCAAACTGTTCAATGACTAGCTACACCTCTAGACCGTGATTGTGCAAT
TAACCGTGTGCTCTTGCTTCGTCAACCACTGGATCTTGATTCCCAGAAAC
GACGCGAAATTCTGACAGCGTTTGATCCGCGTTTCGAAGGAGACCAGTAC
CGAGCCCTGCGAGAAAGGTTAGTGCGAGCTCCGAGGGAGGGCTTCGCTTG
GAACGCCGACCATGTAACTGCAGTCTATCAGGTGCGTTCAGTCAAGGGGT
AGAGTATCAAAACACAATGCCATGCGAGTCGGCTCAAATTTAAGACTCTG
CTGCCCTGGGCTTGGTGGCAACACATACGGCGGTGGAATATTTTAATCGG
CACAAGTGGATTCGTATCGAACGTCGTAATGAGGCCAAGTCTCTCATGTA
TTTCTACGTGTCCGTGCGAGAGCGACGCCTGTCGTTTGCTGCGTGTGTTA
ATGGCATGAAGCGTCCGCTTGAAGGAGACATCGGATTAAGAAGTCTGTGC
AGAATATCTACTTTTGATGGTGCAATCTAATACTGGTGGACACTTACGTT
CCACCCATCTATGCTAGACGTTTGATATGTATTTGATACGTATTTGTCGT
CGCTCATTTTTCCTGACTGTTGTAGCAATGTTTGGTCCTGTATATTGAGC
TATTGAGCTGCAATTAACGGTGAAGAGACTACAGCACGGTTTGATATCGT
TCGATGCCCTCCTGTGCGCGTTTTGTGAAGTTTAACAAAGTTGGCGTACT
TGTAAAGGCAAGAAGTATAGCAACGGTTAGACTAGACCTGTTTATTTAGA
TGCCCTGTGCGGTGCTGTGAAAATCGTGGAAACGCCTGAACGAGTGCAGG
GGGGAGGCAAATGTGGGGCGGATAACCTCCGCACGCTCTGCGTGCTTTGT
CATGCGGTGGTGACTAAAGAGCAGGCCAAGGAGCGGGCTGCCACAAGGGC
CTTGACCAGGTGAGCATCAACTTTACCAGAAAAATGCAGTATTAGTAGTA
CCGTCACGAAGCTTACCATCAGCCCTGAGTCGATTGTTGGGGTTAACATT
TAGTGAACGGGTTCAATTTTGATACTCGGAGTGGAATCGGGATTTAAGAT
AGCGTTTTGCGTCCACGAGTGCTAGAGTATAGGTTTGTTGGAAAAAAACA
CTCGCCCTCATATCGGATGTGGTTCTCAGTTTGTGAACAGAATCACAAGA
AACCAGGCGGGGTTTTGCCTTTAATGACACACGTTTGGTACTAGCAGCAA
ATAGCTTTGAGATTGTGCGGCATGATTAGAGCTTACCAATGCACGAGTCA
GCGTGTGACTCGGAAATATATATCATGAAATGAATCAATCAGTAAGTGAC
ACATGAGTGTTTTGAGGTGCCCGTTTTTGACGTCTTTTTTACCTCATTTC
TTACCCCATTTTGTTTTATACTTTTTCATATAGAGTAGAAATAGTAAGTC
ATCTTGTTGTGTACCGAGCTTTTTTCATCCCGTGTGTAGTAGTGGTCATG
TCGTGTATTGCAATTGTGCGCCAAAATTAAATTCTTCGAACGAAGTGTGG
CATTCCTGTGCGCTCATAGACTCGCCAACAGGGTAAGTTTATCCAGGTTG
ATCTCAGAGTTATAGTTGAGGTAATCGTGCTTTAGTCATCCCCGAATATA
TTCTTGGCTCATCACTGTCGGACTTGCTGTAAGCACTTGAAGTGGTATGT
ATTGGTTTGGTTGGAATAGGCTTGGCTTCACCTGACCGAATATACCCGAC
CGGATTTGACTGAATTTTCCAGGTAATGCTCAGCGCATATTTATCTCGTA
GGACCTAGCTCTTCGAACACAGCCTCACTGCCGTCTAGGGTTTGTGTAGA
CCGTAGTAGTTGATGACGATGACGCATGATTTCCCCTAGAGGGTGACCCC
ACGTTGAACAACAATCCAACATCAAATTGCCGCATTGCAGGACAACAGAT
GACCCAAAGGCGCCTCAGCGCAAGCAAATACCGGGACAGCGGCGACTCGT
CCGCTTCGGCGGTGGAATATCGCTATCCCAAGAATCAACGAGGAACGGAA
AGGCTTCGCCTAGTTCGCCTAACCGAGCGGATGGGACCCTGGCAGATGAG
GACGACCAAGACTTGATGTTGAGCGAGAAAGACAGAGACAAAGACATGGA
CGACATGGGTAGCAGTAGTGATGACGATGTTGTCGTGTTGAAGTCGGCCA
CTAGTCGTACTAAAGGGCTCACAACGACCGGGAAGCGTGAGACTACTCCT
CGCACTAGTACTAGTAATTCTCGTCACCAGAGTCAGAGTCGGGGTGAGGT
GGGTCGTACCTGTATCAGCGGCGGCGGAGTTTCAAAGGGCGGTGATTCTC
ATCGATTACAGGCCAACAAGACTGGGAGCATGCTTCCCGCAGAGTATGGC
CTGCGCGATTACTTTGAGCGATTGGTGAGCGGGGCGGACCTCTTTGAAGC
GAGTCCTTGTGCCACGCCGTCATCCATGAGGCGTTCGGATGGTAGTGTCG
GCAAAGATAGTAGCGTAGATAGCGCTTCAGGGGCTCTTGGGGGTGCGGGT
CTTGGAGCGCGTGATGGGAGTGACGGGGGTACGTTTTCATTCACACGGGT
GAGGCGGCTGAAAAAGCCAACCGAACGATCAGTAGCGTCAAGTGGTGCCG
CACGTGCGAGTTGTTTTGCTTTGGAAAATCGTAGTTCGTCGGACAGCGAT
GGCTCTGGGAGTGCGTAGAGGTGGAGTGCCCGATCTAGTGACTATTCTTC
CCTGTTGGGGCTAATGAAAAGCACTGCCTTATGCCCCATGCCTTAGTTAC
ACATGCAGTGAAGGGTGGTTTTGGGAGACGAGGCGCGTTGCCCTTCGCGT
TCAACCTGATAATAGATTAAGTGTTGCCTTCTTATCTTGCTGCCAGCATA
TGCCTTCTTTCATATTATTAGTTGCGGGCAGATACGAAAAAGGCTTTCCT
CTTTTACTCGTTTATGTTCTTTGATATGTTGATCTGTGTTCTTCAGGGAC
GATGCTTGAATGTTGAAGGTTGCTATCGCTTGGCAACAAAGCAGCTAGCT
GGTCATCCAGCCAATTGTTGTACCCGAGAGATGTTAAACAACATTGACAA
AACAACAGTA back to topCoding sequence (CDS) from alignment at H-paniculata_contig4888:5737..13746- >mRNA_H-paniculata_contig4888.12031.1 ID=mRNA_H-paniculata_contig4888.12031.1|Name=mRNA_H-paniculata_contig4888.12031.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2610bp|location=Sequence derived from alignment at H-paniculata_contig4888:5737..13746- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACGTCATCGCATGGAAAGGAGATCACCACCGCCTGTGCACAATCAGA
CAAGATGACGTCATCGCATGGAAAGGAGATCACCACCGCCTGTGCACAAT
CAGACAAGGTACTGTGTCTCCTCTGCAATGAGCTTGCCAGCGTTCAAGGG
CTGGCGGTTCACCGACGAGATCGCTTCTGCAGCGCGGACTGCATGGAGGT
ACTGTGTCTCCTCTGCAATGAGCTTGCCAGCGTTCAAGGGCTGGCGGTTC
ACCGACGAGATCGCTTCTGCAGCGCGGACTGCATGGAGGCGTACGGGTCA
CGGAGCAGCAGCCATTCTCTTCGACGGGTGGTATCTGACAGGGATGGGGG
AGTGTGCAGCAACAAGTCCTGCGGAAGAGATTGCCAGGCGTTGGTTTCCA
GTCTCAAGGCTGTGGAAAGCCAGCAGGCGTACGGGTCACGGAGCAGCAGC
CATTCTCTTCGACGGGTGGTATCTGACAGGGATGGGGGAGTGTGCAGCAA
CAAGTCCTGCGGAAGAGATTGCCAGGCGTTGGTTTCCAGTCTCAAGGCTG
TGGAAAGCCAGCAGAAACGACGCGAAATTCTGACAGCGTTTGATCCGCGT
TTCGAAGGAGACCAGTACCGAGCCCTGCGAGAAAGGTTAGTGCGAGCTCC
GAGGGAGGGCTTCGCTTGGAACGCCGACCATGTAACTGCAGTCTATCAGA
AACGACGCGAAATTCTGACAGCGTTTGATCCGCGTTTCGAAGGAGACCAG
TACCGAGCCCTGCGAGAAAGGTTAGTGCGAGCTCCGAGGGAGGGCTTCGC
TTGGAACGCCGACCATGTAACTGCAGTCTATCAGGGGGGAGGCAAATGTG
GGGCGGATAACCTCCGCACGCTCTGCGTGCTTTGTCATGCGGTGGTGACT
AAAGAGCAGGCCAAGGAGCGGGCTGCCACAAGGGCCTTGACCAGGGGGGA
GGCAAATGTGGGGCGGATAACCTCCGCACGCTCTGCGTGCTTTGTCATGC
GGTGGTGACTAAAGAGCAGGCCAAGGAGCGGGCTGCCACAAGGGCCTTGA
CCAGGACAACAGATGACCCAAAGGCGCCTCAGCGCAAGCAAATACCGGGA
CAGCGGCGACTCGTCCGCTTCGGCGGTGGAATATCGCTATCCCAAGAATC
AACGAGGAACGGAAAGGCTTCGCCTAGTTCGCCTAACCGAGCGGATGGGA
CCCTGGCAGATGAGGACGACCAAGACTTGATGTTGAGCGAGAAAGACAGA
GACAAAGACATGGACGACATGGGTAGCAGTAGTGATGACGATGTTGTCGT
GTTGAAGTCGGCCACTAGTCGTACTAAAGGGCTCACAACGACCGGGAAGC
GTGAGACTACTCCTCGCACTAGTACTAGTAATTCTCGTCACCAGAGTCAG
AGTCGGGGTGAGGTGGGTCGTACCTGTATCAGCGGCGGCGGAGTTTCAAA
GGGCGGTGATTCTCATCGATTACAGGCCAACAAGACTGGGAGCATGCTTC
CCGCAGAGTATGGCCTGCGCGATTACTTTGAGCGATTGGTGAGCGGGGCG
GACCTCTTTGAAGCGAGTCCTTGTGCCACGCCGTCATCCATGAGGCGTTC
GGATGGTAGTGTCGGCAAAGATAGTAGCGTAGATAGCGCTTCAGGGGCTC
TTGGGGGTGCGGGTCTTGGAGCGCGTGATGGGAGTGACGGGGGTACGTTT
TCATTCACACGGGTGAGGCGGCTGAAAAAGCCAACCGAACGATCAGTAGC
GTCAAGTGGTGCCGCACGTGCGAGTTGTTTTGCTTTGGAAAATCGTAGTT
CGTCGGACAGCGATGGCTCTGGGAGTGCGTAGGACAACAGATGACCCAAA
GGCGCCTCAGCGCAAGCAAATACCGGGACAGCGGCGACTCGTCCGCTTCG
GCGGTGGAATATCGCTATCCCAAGAATCAACGAGGAACGGAAAGGCTTCG
CCTAGTTCGCCTAACCGAGCGGATGGGACCCTGGCAGATGAGGACGACCA
AGACTTGATGTTGAGCGAGAAAGACAGAGACAAAGACATGGACGACATGG
GTAGCAGTAGTGATGACGATGTTGTCGTGTTGAAGTCGGCCACTAGTCGT
ACTAAAGGGCTCACAACGACCGGGAAGCGTGAGACTACTCCTCGCACTAG
TACTAGTAATTCTCGTCACCAGAGTCAGAGTCGGGGTGAGGTGGGTCGTA
CCTGTATCAGCGGCGGCGGAGTTTCAAAGGGCGGTGATTCTCATCGATTA
CAGGCCAACAAGACTGGGAGCATGCTTCCCGCAGAGTATGGCCTGCGCGA
TTACTTTGAGCGATTGGTGAGCGGGGCGGACCTCTTTGAAGCGAGTCCTT
GTGCCACGCCGTCATCCATGAGGCGTTCGGATGGTAGTGTCGGCAAAGAT
AGTAGCGTAGATAGCGCTTCAGGGGCTCTTGGGGGTGCGGGTCTTGGAGC
GCGTGATGGGAGTGACGGGGGTACGTTTTCATTCACACGGGTGAGGCGGC
TGAAAAAGCCAACCGAACGATCAGTAGCGTCAAGTGGTGCCGCACGTGCG
AGTTGTTTTGCTTTGGAAAATCGTAGTTCGTCGGACAGCGATGGCTCTGG
GAGTGCGTAG back to top
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