prot_H-paniculata_contig11877.1202.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11877.1202.1
Unique Nameprot_H-paniculata_contig11877.1202.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length131
Homology
BLAST of mRNA_H-paniculata_contig11877.1202.1 vs. uniprot
Match: A0A0A9XB11_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9XB11_LYGHE)

HSP 1 Score: 120 bits (300), Expect = 9.700e-31
Identity = 62/130 (47.69%), Postives = 84/130 (64.62%), Query Frame = 0
Query:    1 MVESLMYASTETRPDTAYAVHQAARRMEDPCRENFSTCKRIFRYLSAASHPGITFGGKSNGHSLEGFLDTDWAEDVEDRKSTTGYVFKLSDGAIGWCSRKQQLVTWSSTEAKYVATGEVKKETVYLRGLL 130
            ++ SLMY +  TRPD A++V+  ++       E+F   KRI +YL  +    + F  K NG  L GF D DWA D+ DRKS +G+VF +SDGAI W +RKQQ V+ SSTEA+YVA  E  KE V+L+GL+
Sbjct:   83 LIGSLMYIAINTRPDIAFSVNYMSQFNNCYSPEHFKYVKRILKYLKGSIDKSLIF--KKNGCELMGFADADWANDIIDRKSYSGFVFMMSDGAISWEARKQQCVSLSSTEAEYVAISEASKEAVFLKGLV 210          
BLAST of mRNA_H-paniculata_contig11877.1202.1 vs. uniprot
Match: UPI001E2788DD (secreted RxLR effector protein 161-like n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E2788DD)

HSP 1 Score: 116 bits (290), Expect = 1.350e-30
Identity = 58/126 (46.03%), Postives = 86/126 (68.25%), Query Frame = 0
Query:    2 VESLMYASTETRPDTAYAVHQAARRMEDPCRENFSTCKRIFRYLSAASHPGITFGGKSNGHSLEGFLDTDWAEDVEDRKSTTGYVFKLSDGAIGWCSRKQQLVTWSSTEAKYVATGEVKKETVYLR 127
            V SLM+A+  +RPD AY+V  A+R +  P + +++  KRI RYL + S  GI +  + +   L GF D+D+A D + RKSTTGY+FKLS+G + W S++QQ VT S+TEA+YVA  +  KE +++R
Sbjct:   31 VGSLMFAAVVSRPDIAYSVGVASRYLNAPSKTHWNAVKRIIRYLKSTSELGIYYS-REDKLQLSGFSDSDYASDEDTRKSTTGYIFKLSNGDVTWSSKRQQAVTLSTTEAEYVAACQATKEAIWIR 155          
BLAST of mRNA_H-paniculata_contig11877.1202.1 vs. uniprot
Match: A0A2N9GS71_FAGSY (Uncharacterized protein n=3 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GS71_FAGSY)

HSP 1 Score: 119 bits (299), Expect = 1.490e-30
Identity = 61/129 (47.29%), Postives = 85/129 (65.89%), Query Frame = 0
Query:    2 VESLMYASTETRPDTAYAVHQAARRMEDPCRENFSTCKRIFRYLSAASHPGITFGGKSNGHSLEGFLDTDWAEDVEDRKSTTGYVFKLSDGAIGWCSRKQQLVTWSSTEAKYVATGEVKKETVYLRGLL 130
            V  LMYA   TRPD A+AV   +R M +P RE+++  K IFRYL   +  GI F  +   +S+ G++D D+A +V+DR+STTGYVF LS G I W S  Q +V  S+TEA+Y+A  E  KE ++L+GL+
Sbjct:   69 VGCLMYAMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLV 197          
BLAST of mRNA_H-paniculata_contig11877.1202.1 vs. uniprot
Match: A0A2N9HJ76_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HJ76_FAGSY)

HSP 1 Score: 121 bits (304), Expect = 1.830e-29
Identity = 62/129 (48.06%), Postives = 86/129 (66.67%), Query Frame = 0
Query:    2 VESLMYASTETRPDTAYAVHQAARRMEDPCRENFSTCKRIFRYLSAASHPGITFGGKSNGHSLEGFLDTDWAEDVEDRKSTTGYVFKLSDGAIGWCSRKQQLVTWSSTEAKYVATGEVKKETVYLRGLL 130
            V  LMYA   TRPD A+AV   +R M +P RE+++  K IFRYL   +  GI F  +S  +S+ G++D D+A +V+DR+STTGYVF LS G I W S  Q +V  S+TEA+Y+A  E  KE ++L+GL+
Sbjct:  764 VGCLMYAMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQSGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLV 892          
BLAST of mRNA_H-paniculata_contig11877.1202.1 vs. uniprot
Match: A0A2N9HGZ8_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HGZ8_FAGSY)

HSP 1 Score: 119 bits (299), Expect = 1.850e-29
Identity = 61/129 (47.29%), Postives = 85/129 (65.89%), Query Frame = 0
Query:    2 VESLMYASTETRPDTAYAVHQAARRMEDPCRENFSTCKRIFRYLSAASHPGITFGGKSNGHSLEGFLDTDWAEDVEDRKSTTGYVFKLSDGAIGWCSRKQQLVTWSSTEAKYVATGEVKKETVYLRGLL 130
            V  LMY    TRPD A+AV   +R M +P RE+++  K IFRYL   +  GI F  +   +S+ G++D D+A +V+DR+STTGYVF LS G I W S  Q +VT S+TEA+Y+A  E  KE ++L+GL+
Sbjct:  246 VGCLMYEMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVTMSTTEAEYMAAAETAKEALWLKGLV 374          
BLAST of mRNA_H-paniculata_contig11877.1202.1 vs. uniprot
Match: A0A2N9GRR2_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GRR2_FAGSY)

HSP 1 Score: 121 bits (304), Expect = 1.860e-29
Identity = 62/129 (48.06%), Postives = 86/129 (66.67%), Query Frame = 0
Query:    2 VESLMYASTETRPDTAYAVHQAARRMEDPCRENFSTCKRIFRYLSAASHPGITFGGKSNGHSLEGFLDTDWAEDVEDRKSTTGYVFKLSDGAIGWCSRKQQLVTWSSTEAKYVATGEVKKETVYLRGLL 130
            V  LMYA   TRPD A+AV   +R M +P RE+++  K IFRYL   +  GI F  +S  +S+ G++D D+A +V+DR+STTGYVF LS G I W S  Q +V  S+TEA+Y+A  E  KE ++L+GL+
Sbjct: 1046 VGCLMYAMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQSGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLV 1174          
BLAST of mRNA_H-paniculata_contig11877.1202.1 vs. uniprot
Match: A0A2N9FA25_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FA25_FAGSY)

HSP 1 Score: 121 bits (303), Expect = 2.530e-29
Identity = 62/129 (48.06%), Postives = 86/129 (66.67%), Query Frame = 0
Query:    2 VESLMYASTETRPDTAYAVHQAARRMEDPCRENFSTCKRIFRYLSAASHPGITFGGKSNGHSLEGFLDTDWAEDVEDRKSTTGYVFKLSDGAIGWCSRKQQLVTWSSTEAKYVATGEVKKETVYLRGLL 130
            V  LMYA   TRPD A+AV   +R M +P RE+++  K IFRYL   +  GI F  +   +S+ G++D D+A +V+DR+STTGYVF LS G I W S  Q +V  S+TEA+Y+A  EV KE ++L+GL+
Sbjct:  956 VGCLMYAMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEVAKEALWLKGLV 1084          
BLAST of mRNA_H-paniculata_contig11877.1202.1 vs. uniprot
Match: A0A2N9H4V1_FAGSY (Uncharacterized protein n=7 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9H4V1_FAGSY)

HSP 1 Score: 121 bits (303), Expect = 2.550e-29
Identity = 62/129 (48.06%), Postives = 85/129 (65.89%), Query Frame = 0
Query:    2 VESLMYASTETRPDTAYAVHQAARRMEDPCRENFSTCKRIFRYLSAASHPGITFGGKSNGHSLEGFLDTDWAEDVEDRKSTTGYVFKLSDGAIGWCSRKQQLVTWSSTEAKYVATGEVKKETVYLRGLL 130
            V  LMYA   TRPD A+AV   +R M +P RE+++  K IFRYL   +  GI F  +   +S+ G++D D+A +V+DR+STTGYVF LS G I W S  Q +V  S+TEAKY+A  E  KE ++L+GL+
Sbjct: 1090 VGCLMYAMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAKYMAVAEAAKEALWLKGLV 1218          
BLAST of mRNA_H-paniculata_contig11877.1202.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT)

HSP 1 Score: 117 bits (292), Expect = 2.660e-29
Identity = 56/130 (43.08%), Postives = 83/130 (63.85%), Query Frame = 0
Query:    1 MVESLMYASTETRPDTAYAVHQAARRMEDPCRENFSTCKRIFRYLSAASHPGITFGGKSNGHSLEGFLDTDWAEDVEDRKSTTGYVFKLSDGAIGWCSRKQQLVTWSSTEAKYVATGEVKKETVYLRGLL 130
            ++  L Y +T TRPD A AV   ++ M  P +E++   KR+ RY+    + G+ F GKS   SL G+ D DWA D++ R+ST+GYVF+++   + WCS++Q  VT S+TEA+YVA     +E V+LR LL
Sbjct:   89 LIGCLTYVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVALSHATQEIVWLRRLL 218          
BLAST of mRNA_H-paniculata_contig11877.1202.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT)

HSP 1 Score: 120 bits (302), Expect = 3.100e-29
Identity = 60/129 (46.51%), Postives = 81/129 (62.79%), Query Frame = 0
Query:    2 VESLMYASTETRPDTAYAVHQAARRMEDPCRENFSTCKRIFRYLSAASHPGITFGGKSNGHSLEGFLDTDWAEDVEDRKSTTGYVFKLSDGAIGWCSRKQQLVTWSSTEAKYVATGEVKKETVYLRGLL 130
            V  L+Y ST+TRPD AYAV   AR   DP  E++   KRI RYL+     G+ + G     S  G+ D DWA D++DRKST+GYVF++S+ AI W S+KQ  V  S+ EA+Y+A     +E V+L+ LL
Sbjct:  280 VGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMALASATQEAVWLQQLL 408          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11877.1202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0A9XB11_LYGHE9.700e-3147.69Retrovirus-related Pol polyprotein from transposon... [more]
UPI001E2788DD1.350e-3046.03secreted RxLR effector protein 161-like n=1 Tax=Ha... [more]
A0A2N9GS71_FAGSY1.490e-3047.29Uncharacterized protein n=3 Tax=Fagus sylvatica Ta... [more]
A0A2N9HJ76_FAGSY1.830e-2948.06Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9HGZ8_FAGSY1.850e-2947.29Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9GRR2_FAGSY1.860e-2948.06Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A2N9FA25_FAGSY2.530e-2948.06Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A2N9H4V1_FAGSY2.550e-2948.06Uncharacterized protein n=7 Tax=Fagus sylvatica Ta... [more]
A0A7D9D5L2_PARCT2.660e-2943.08Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A7D9KES8_PARCT3.100e-2946.51Retrovirus-related Pol poly from transposon TNT 1-... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..130
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 1..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11877contigH-paniculata_contig11877:1817..2209 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11877.1202.1mRNA_H-paniculata_contig11877.1202.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11877 1571..3844 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11877.1202.1 ID=prot_H-paniculata_contig11877.1202.1|Name=mRNA_H-paniculata_contig11877.1202.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=131bp
MVESLMYASTETRPDTAYAVHQAARRMEDPCRENFSTCKRIFRYLSAASH
PGITFGGKSNGHSLEGFLDTDWAEDVEDRKSTTGYVFKLSDGAIGWCSRK
QQLVTWSSTEAKYVATGEVKKETVYLRGLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like