prot_H-paniculata_contig4878.12013.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4878.12013.1
Unique Nameprot_H-paniculata_contig4878.12013.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length660
Homology
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BLAST of mRNA_H-paniculata_contig4878.12013.1 vs. uniprot
Match: D8LM16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM16_ECTSI)

HSP 1 Score: 257 bits (656), Expect = 7.060e-77
Identity = 123/161 (76.40%), Postives = 135/161 (83.85%), Query Frame = 0 
Query:   86 PSRLPNMKAPRRWQPSEDRRLAESVKLHGEANWKAIAAGVGSRNHVQCLQRWKKVLRPGLVKGQWSAKEDAVLMKLACSGYKNWGVLSNHMPGRTSKQCRERWYHHLDPSINKSAYTPREDKIIIETQARLGNKWSQIAARLPGRTENSIKIRCKALQRRG 246
            P+R      PRRWQP+ED++L  +VK  GE +WK+IA  VGSRNHVQCLQRWKKVLRPGLVKGQW A+EDA LMKLA + +KNWGVLS  M GRTSKQCRERW HHLDPSINK AYT  ED IIIETQA LGN+WSQIAARLPGRTENSIKIRCKALQR+G
Sbjct:   97 PTRKKASTRPRRWQPAEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDNIIIETQAELGNRWSQIAARLPGRTENSIKIRCKALQRKG 257
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BLAST of mRNA_H-paniculata_contig4878.12013.1 vs. uniprot
Match: A0A6H5KJU6_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJU6_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 2.960e-73
Identity = 129/185 (69.73%), Postives = 144/185 (77.84%), Query Frame = 0 
Query:   95 PRRWQPSEDRRLAESVKLHGEANWKAIAAGVGSRNHVQCLQRWKKVLRPGLVKGQWSAKEDAVLMKLACSGYKNWGVLSNHMPGRTSKQCRERWYHHLDPSINKSAYTPREDKIIIETQARLGNKWSQIAARLPGRTENSIKIRCKALQRR------GTGAQSTSNSGPTRGSSSKKGSTGVVSR 273
            PRRWQP ED++L  +VK  GE +WK+IA  VGSRNHVQCLQRWKKVLRPGLVKGQW A+EDA LMKLA + +KNWGVLS  M GRTSKQCRERW HHLDPSINK AYT  EDKIIIETQA+LGN+WSQIAARLPGRTENSIKIRCKALQR+       +G +S S S P   +  K   T   +R
Sbjct:  113 PRRWQPEEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDKIIIETQAKLGNRWSQIAARLPGRTENSIKIRCKALQRKVLSGSPSSGGRSGSTSSPAGRAPKKSTGTSTTAR 297
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BLAST of mRNA_H-paniculata_contig4878.12013.1 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA)

HSP 1 Score: 216 bits (551), Expect = 7.330e-61
Identity = 100/152 (65.79%), Postives = 116/152 (76.32%), Query Frame = 0 
Query:   93 KAPRRWQPSEDRRLAESVKLHGEANWKAIAAGVGSRNHVQCLQRWKKVLRPGLVKGQWSAKEDAVLMKLACSGYKNWGVLSNHMPGRTSKQCRERWYHHLDPSINKSAYTPREDKIIIETQARLGNKWSQIAARLPGRTENSIKIRCKALQR 244
            K PR+W   ED  L  +V+ +GE+NWK IA  VG+RNHVQCLQRWKKVL+PGLVKGQWSA EDA L+ L   G+KNWG L+  MPGRTSKQCRERW HHLDPS+ K  YT  ED  I+  Q+ LGNKWS+IA  LPGRTEN++KIR KAL R
Sbjct:   25 KIPRKWTLVEDEELRHAVRKYGESNWKDIAREVGTRNHVQCLQRWKKVLKPGLVKGQWSALEDAKLVDLVGKGFKNWGQLAAQMPGRTSKQCRERWSHHLDPSVKKGEYTTEEDNTILRLQSELGNKWSEIAKHLPGRTENAVKIRWKALDR 176
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BLAST of mRNA_H-paniculata_contig4878.12013.1 vs. uniprot
Match: H3G911_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G911_PHYRM)

HSP 1 Score: 205 bits (521), Expect = 5.300e-59
Identity = 92/150 (61.33%), Postives = 113/150 (75.33%), Query Frame = 0 
Query:   95 PRRWQPSEDRRLAESVKLHGEANWKAIAAGVGSRNHVQCLQRWKKVLRPGLVKGQWSAKEDAVLMKLACSGYKNWGVLSNHMPGRTSKQCRERWYHHLDPSINKSAYTPREDKIIIETQARLGNKWSQIAARLPGRTENSIKIRCKALQR 244
            P+RW P ED +L E+V  HGE NWK+IA  V  RNH QCLQRW KVL PGLVKG W   ED +L +L   G KNWG ++  +PGRTSKQCRERWY+HLDPSI +  Y+  ED++I++ QARLGN+WS IAA LPGRTE+++KIR K+L R
Sbjct:    9 PKRWTPEEDEKLREAVNRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSAEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCR 158
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BLAST of mRNA_H-paniculata_contig4878.12013.1 vs. uniprot
Match: D0NJN5_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0NJN5_PHYIT)

HSP 1 Score: 207 bits (527), Expect = 7.640e-59
Identity = 93/150 (62.00%), Postives = 115/150 (76.67%), Query Frame = 0 
Query:   95 PRRWQPSEDRRLAESVKLHGEANWKAIAAGVGSRNHVQCLQRWKKVLRPGLVKGQWSAKEDAVLMKLACSGYKNWGVLSNHMPGRTSKQCRERWYHHLDPSINKSAYTPREDKIIIETQARLGNKWSQIAARLPGRTENSIKIRCKALQR 244
            P+RW P ED +L E+V  HGE NWK+IA  V  RNH QCLQRW KVL PGLVKG W  +ED +L +L   G KNWG ++  +PGRTSKQCRERWY+HLDPSI +  Y+P ED++I++ QARLGN+WS IAA LPGRTE+++KIR K+L R
Sbjct:   82 PKRWTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPEEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCR 231
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BLAST of mRNA_H-paniculata_contig4878.12013.1 vs. uniprot
Match: A0A662WMC1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WMC1_9STRA)

HSP 1 Score: 201 bits (512), Expect = 5.020e-57
Identity = 91/147 (61.90%), Postives = 113/147 (76.87%), Query Frame = 0 
Query:   95 PRRWQPSEDRRLAESVKLHGEANWKAIAAGVGSRNHVQCLQRWKKVLRPGLVKGQWSAKEDAVLMKLACSGYKNWGVLSNHMPGRTSKQCRERWYHHLDPSINKSAYTPREDKIIIETQARLGNKWSQIAARLPGRTENSIKIRCKA 241
            PRRW  +ED  L  +V+ H E NWKAIAA V  RNH QCLQRW KVL PGLVKG WS  ED +L +L  +  KNWG ++  +PGRTSKQCRERW++HLDP+I + AY+P ED++I+E QARLGN+WS IAA LPGRTE+++KIR K+
Sbjct:    5 PRRWTAAEDEALRSAVESHREKNWKAIAAHVAGRNHTQCLQRWTKVLAPGLVKGHWSPHEDELLRRLVAADQKNWGDVAAKIPGRTSKQCRERWHNHLDPAIVRGAYSPEEDRLILEAQARLGNRWSVIAAMLPGRTEDAVKIRWKS 151
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BLAST of mRNA_H-paniculata_contig4878.12013.1 vs. uniprot
Match: A0A3M6VKU0_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKU0_9STRA)

HSP 1 Score: 202 bits (514), Expect = 7.930e-57
Identity = 90/150 (60.00%), Postives = 114/150 (76.00%), Query Frame = 0 
Query:   95 PRRWQPSEDRRLAESVKLHGEANWKAIAAGVGSRNHVQCLQRWKKVLRPGLVKGQWSAKEDAVLMKLACSGYKNWGVLSNHMPGRTSKQCRERWYHHLDPSINKSAYTPREDKIIIETQARLGNKWSQIAARLPGRTENSIKIRCKALQR 244
            P+RW P+ED +L ++V  HGE NWK+IA  V  RNH QCLQRW KVL PGLVKG W   ED +L +L   G KNWG ++  +PGRTSKQCRERWY+HLDPSI +  Y+  ED++I++ Q+RLGN+WS IAA LPGRTE+++KIR K+L R
Sbjct:   99 PKRWTPTEDEKLRDAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSQAEDRMILDAQSRLGNRWSAIAAMLPGRTEDAVKIRWKSLCR 248
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BLAST of mRNA_H-paniculata_contig4878.12013.1 vs. uniprot
Match: A0A0W8DM41_PHYNI (Gamma-soluble NSF attachment protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DM41_PHYNI)

HSP 1 Score: 207 bits (528), Expect = 1.490e-56
Identity = 93/150 (62.00%), Postives = 115/150 (76.67%), Query Frame = 0 
Query:   95 PRRWQPSEDRRLAESVKLHGEANWKAIAAGVGSRNHVQCLQRWKKVLRPGLVKGQWSAKEDAVLMKLACSGYKNWGVLSNHMPGRTSKQCRERWYHHLDPSINKSAYTPREDKIIIETQARLGNKWSQIAARLPGRTENSIKIRCKALQR 244
            P+RW P ED +L E+V  HGE NWK+IA  V  RNH QCLQRW KVL PGLVKG W  +ED +L +L   G KNWG ++  +PGRTSKQCRERWY+HLDPSI +  Y+P ED++I++ QARLGN+WS IAA LPGRTE+++KIR K+L R
Sbjct:  112 PKRWTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPEEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCR 261
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BLAST of mRNA_H-paniculata_contig4878.12013.1 vs. uniprot
Match: A0A2P4Y3D9_9STRA (Myb-like DNA-binding protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y3D9_9STRA)

HSP 1 Score: 202 bits (515), Expect = 4.770e-56
Identity = 95/164 (57.93%), Postives = 119/164 (72.56%), Query Frame = 0 
Query:   95 PRRWQPSEDRRLAESVKLHGEANWKAIAAGVGSRNHVQCLQRWKKVLRPGLVKGQWSAKEDAVLMKLACSGYKNWGVLSNHMPGRTSKQCRERWYHHLDPSINKSAYTPREDKIIIETQARLGNKWSQIAARLPGRTENSIKIRCKAL--QRRGTGAQSTSNSG 256
            P+RW   ED +L E+V  HGE NWK+IA  V  RNH QCLQRW KVL PGLVKG W   ED +L +L   G KNWG ++  +PGRTSKQCRERWY+HLDPSI +  YT  ED++I++ QARLGN+WS IAA LPGRTE+++KIR K+L   R+G G +  ++ G
Sbjct:   91 PKRWTQEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYTQEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCRVRKGQGRRGQADKG 254
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BLAST of mRNA_H-paniculata_contig4878.12013.1 vs. uniprot
Match: A0A2D4BRV7_PYTIN (Myblike DNAbinding protein putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRV7_PYTIN)

HSP 1 Score: 205 bits (521), Expect = 1.290e-55
Identity = 97/153 (63.40%), Postives = 116/153 (75.82%), Query Frame = 0 
Query:   90 PNMKA-PRRWQPSEDRRLAESVKLHGEANWKAIAAGVGSRNHVQCLQRWKKVLRPGLVKGQWSAKEDAVLMKLACSGYKNWGVLSNHMPGRTSKQCRERWYHHLDPSINKSAYTPREDKIIIETQARLGNKWSQIAARLPGRTENSIKIRCKA 241
            P  KA PRRW   ED  L ++V+ H E NWKAIAA V  RNH QCLQRW KVL PGLVKG WS  ED +L +L   G KNWG ++  +PGRTSKQCRERW++HLDP+I + AYTP ED+II+E QARLGN+WS IAA LPGRTE+++KIR K+
Sbjct:  216 PTRKANPRRWTKEEDDALRQAVENHKEKNWKAIAAQVPGRNHTQCLQRWTKVLAPGLVKGHWSPHEDELLKRLVAGGNKNWGEVAAKIPGRTSKQCRERWHNHLDPNIVRGAYTPEEDRIILEAQARLGNRWSVIAAMLPGRTEDAVKIRWKS 368
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4878.12013.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM16_ECTSI7.060e-7776.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJU6_9PHAE2.960e-7369.73MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7S2UU49_9STRA7.330e-6165.79Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
H3G911_PHYRM5.300e-5961.33Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
D0NJN5_PHYIT7.640e-5962.00Myb-like DNA-binding protein, putative n=2 Tax=Phy... [more]
A0A662WMC1_9STRA5.020e-5761.90Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A3M6VKU0_9STRA7.930e-5760.00Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A0W8DM41_PHYNI1.490e-5662.00Gamma-soluble NSF attachment protein n=1 Tax=Phyto... [more]
A0A2P4Y3D9_9STRA4.770e-5657.93Myb-like DNA-binding protein (Fragment) n=1 Tax=Ph... [more]
A0A2D4BRV7_PYTIN1.290e-5563.40Myblike DNAbinding protein putative n=1 Tax=Pythiu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 94..143
e-value: 2.9E-10
score: 50.1
coord: 146..194
e-value: 9.7E-7
score: 38.4
coord: 197..245
e-value: 1.9E-9
score: 47.4
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 97..141
e-value: 1.1E-10
score: 41.6
NoneNo IPR availableGENE3D1.10.10.60coord: 200..258
e-value: 1.5E-12
score: 49.2
NoneNo IPR availableGENE3D1.10.10.60coord: 96..145
e-value: 5.3E-14
score: 54.0
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 150..207
e-value: 4.8E-9
score: 36.3
NoneNo IPR availableGENE3D1.10.10.60coord: 146..198
e-value: 1.1E-17
score: 65.7
NoneNo IPR availablePANTHERPTHR45614:SF29coord: 146..280
NoneNo IPR availablePANTHERPTHR45614:SF29coord: 92..160
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 92..160
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 146..280
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 197..247
score: 11.408
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 142..196
score: 17.481
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 90..141
score: 9.789
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 172..249
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 121..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4878contigH-paniculata_contig4878:4676..11115 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4878.12013.1mRNA_H-paniculata_contig4878.12013.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4878 4400..11828 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4878.12013.1 ID=prot_H-paniculata_contig4878.12013.1|Name=mRNA_H-paniculata_contig4878.12013.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=660bp
MVQPKRYLSKEDQDNNEWERPKRQNSGEQLARPRSRRLSSEESEYTTDEA
SDEEEEYVPGLASGSGSGPMLAPGRKKCSSKASLVPSRLPNMKAPRRWQP
SEDRRLAESVKLHGEANWKAIAAGVGSRNHVQCLQRWKKVLRPGLVKGQW
SAKEDAVLMKLACSGYKNWGVLSNHMPGRTSKQCRERWYHHLDPSINKSA
YTPREDKIIIETQARLGNKWSQIAARLPGRTENSIKIRCKALQRRGTGAQ
STSNSGPTRGSSSKKGSTGVVSRPYTPAATASSTATTTAIATTTTTTATA
ITADSDSEEPKTEVVETPPPNMCLASSISCPPPVDKVESGNKWVSSSSRP
PAQATGRPMPFSPPRSPFFQQNTGGGTSSSATPVSFALVAGPARARAPAP
APAPVLTSVRDDCNFDGLWKSWSKTAVPGVRYASHMVPRVAAPYFCPSSA
VAPSVVKSEVSNRADFRSFEDYSTGASSARQPLPPSMELLAIKNEPAERA
PFCGGYGAYSASLVLDADNTALPETGSSFPRVPCEAMPDSSISQLFAFGL
GAIMEGTGENAEREQQRCSADSSSADAALSATGEQLVAPTATEEPNVEAI
NKAHNDDVHDELGDLNPLTVNNLDGKEGEDEAAAPLRSCCSFLDLPGEGM
VLGDMPLSW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR015495Myb-like_TF
IPR017930Myb_dom
IPR009057Homeobox-like_sf