mRNA_H-paniculata_contig4878.12013.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4878.12013.1 vs. uniprot
Match: D8LM16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM16_ECTSI) HSP 1 Score: 257 bits (656), Expect = 1.760e-74 Identity = 123/161 (76.40%), Postives = 135/161 (83.85%), Query Frame = 1
Query: 532 PSRLPNMKAPRRWQPSEDRRLAESVKLHGEANWKAIAAGVGSRNHVQCLQRWKKVLRPGLVKGQWSAKEDAVLMKLACSGYKNWGVLSNHMPGRTSKQCRERWYHHLDPSINKSAYTPREDKIIIETQARLGNKWSQIAARLPGRTENSIKIRCKALQRRG 1014
P+R PRRWQP+ED++L +VK GE +WK+IA VGSRNHVQCLQRWKKVLRPGLVKGQW A+EDA LMKLA + +KNWGVLS M GRTSKQCRERW HHLDPSINK AYT ED IIIETQA LGN+WSQIAARLPGRTENSIKIRCKALQR+G
Sbjct: 97 PTRKKASTRPRRWQPAEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDNIIIETQAELGNRWSQIAARLPGRTENSIKIRCKALQRKG 257
BLAST of mRNA_H-paniculata_contig4878.12013.1 vs. uniprot
Match: A0A6H5KJU6_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJU6_9PHAE) HSP 1 Score: 258 bits (659), Expect = 7.770e-71 Identity = 129/185 (69.73%), Postives = 144/185 (77.84%), Query Frame = 1
Query: 559 PRRWQPSEDRRLAESVKLHGEANWKAIAAGVGSRNHVQCLQRWKKVLRPGLVKGQWSAKEDAVLMKLACSGYKNWGVLSNHMPGRTSKQCRERWYHHLDPSINKSAYTPREDKIIIETQARLGNKWSQIAARLPGRTENSIKIRCKALQRR------GTGAQSTSNSGPTRGSSSKKGSTGVVSR 1095
PRRWQP ED++L +VK GE +WK+IA VGSRNHVQCLQRWKKVLRPGLVKGQW A+EDA LMKLA + +KNWGVLS M GRTSKQCRERW HHLDPSINK AYT EDKIIIETQA+LGN+WSQIAARLPGRTENSIKIRCKALQR+ +G +S S S P + K T +R
Sbjct: 113 PRRWQPEEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDKIIIETQAKLGNRWSQIAARLPGRTENSIKIRCKALQRKVLSGSPSSGGRSGSTSSPAGRAPKKSTGTSTTAR 297
BLAST of mRNA_H-paniculata_contig4878.12013.1 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA) HSP 1 Score: 216 bits (551), Expect = 3.990e-59 Identity = 100/152 (65.79%), Postives = 116/152 (76.32%), Query Frame = 1
Query: 553 KAPRRWQPSEDRRLAESVKLHGEANWKAIAAGVGSRNHVQCLQRWKKVLRPGLVKGQWSAKEDAVLMKLACSGYKNWGVLSNHMPGRTSKQCRERWYHHLDPSINKSAYTPREDKIIIETQARLGNKWSQIAARLPGRTENSIKIRCKALQR 1008
K PR+W ED L +V+ +GE+NWK IA VG+RNHVQCLQRWKKVL+PGLVKGQWSA EDA L+ L G+KNWG L+ MPGRTSKQCRERW HHLDPS+ K YT ED I+ Q+ LGNKWS+IA LPGRTEN++KIR KAL R
Sbjct: 25 KIPRKWTLVEDEELRHAVRKYGESNWKDIAREVGTRNHVQCLQRWKKVLKPGLVKGQWSALEDAKLVDLVGKGFKNWGQLAAQMPGRTSKQCRERWSHHLDPSVKKGEYTTEEDNTILRLQSELGNKWSEIAKHLPGRTENAVKIRWKALDR 176
BLAST of mRNA_H-paniculata_contig4878.12013.1 vs. uniprot
Match: H3G911_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G911_PHYRM) HSP 1 Score: 205 bits (521), Expect = 1.730e-57 Identity = 92/150 (61.33%), Postives = 113/150 (75.33%), Query Frame = 1
Query: 559 PRRWQPSEDRRLAESVKLHGEANWKAIAAGVGSRNHVQCLQRWKKVLRPGLVKGQWSAKEDAVLMKLACSGYKNWGVLSNHMPGRTSKQCRERWYHHLDPSINKSAYTPREDKIIIETQARLGNKWSQIAARLPGRTENSIKIRCKALQR 1008
P+RW P ED +L E+V HGE NWK+IA V RNH QCLQRW KVL PGLVKG W ED +L +L G KNWG ++ +PGRTSKQCRERWY+HLDPSI + Y+ ED++I++ QARLGN+WS IAA LPGRTE+++KIR K+L R
Sbjct: 9 PKRWTPEEDEKLREAVNRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSAEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCR 158
BLAST of mRNA_H-paniculata_contig4878.12013.1 vs. uniprot
Match: D0NJN5_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0NJN5_PHYIT) HSP 1 Score: 207 bits (527), Expect = 2.780e-57 Identity = 93/150 (62.00%), Postives = 115/150 (76.67%), Query Frame = 1
Query: 559 PRRWQPSEDRRLAESVKLHGEANWKAIAAGVGSRNHVQCLQRWKKVLRPGLVKGQWSAKEDAVLMKLACSGYKNWGVLSNHMPGRTSKQCRERWYHHLDPSINKSAYTPREDKIIIETQARLGNKWSQIAARLPGRTENSIKIRCKALQR 1008
P+RW P ED +L E+V HGE NWK+IA V RNH QCLQRW KVL PGLVKG W +ED +L +L G KNWG ++ +PGRTSKQCRERWY+HLDPSI + Y+P ED++I++ QARLGN+WS IAA LPGRTE+++KIR K+L R
Sbjct: 82 PKRWTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPEEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCR 231
BLAST of mRNA_H-paniculata_contig4878.12013.1 vs. uniprot
Match: A0A662WMC1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WMC1_9STRA) HSP 1 Score: 201 bits (512), Expect = 1.410e-55 Identity = 91/147 (61.90%), Postives = 113/147 (76.87%), Query Frame = 1
Query: 559 PRRWQPSEDRRLAESVKLHGEANWKAIAAGVGSRNHVQCLQRWKKVLRPGLVKGQWSAKEDAVLMKLACSGYKNWGVLSNHMPGRTSKQCRERWYHHLDPSINKSAYTPREDKIIIETQARLGNKWSQIAARLPGRTENSIKIRCKA 999
PRRW +ED L +V+ H E NWKAIAA V RNH QCLQRW KVL PGLVKG WS ED +L +L + KNWG ++ +PGRTSKQCRERW++HLDP+I + AY+P ED++I+E QARLGN+WS IAA LPGRTE+++KIR K+
Sbjct: 5 PRRWTAAEDEALRSAVESHREKNWKAIAAHVAGRNHTQCLQRWTKVLAPGLVKGHWSPHEDELLRRLVAADQKNWGDVAAKIPGRTSKQCRERWHNHLDPAIVRGAYSPEEDRLILEAQARLGNRWSVIAAMLPGRTEDAVKIRWKS 151
BLAST of mRNA_H-paniculata_contig4878.12013.1 vs. uniprot
Match: A0A3M6VKU0_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKU0_9STRA) HSP 1 Score: 202 bits (514), Expect = 2.320e-55 Identity = 90/150 (60.00%), Postives = 114/150 (76.00%), Query Frame = 1
Query: 559 PRRWQPSEDRRLAESVKLHGEANWKAIAAGVGSRNHVQCLQRWKKVLRPGLVKGQWSAKEDAVLMKLACSGYKNWGVLSNHMPGRTSKQCRERWYHHLDPSINKSAYTPREDKIIIETQARLGNKWSQIAARLPGRTENSIKIRCKALQR 1008
P+RW P+ED +L ++V HGE NWK+IA V RNH QCLQRW KVL PGLVKG W ED +L +L G KNWG ++ +PGRTSKQCRERWY+HLDPSI + Y+ ED++I++ Q+RLGN+WS IAA LPGRTE+++KIR K+L R
Sbjct: 99 PKRWTPTEDEKLRDAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSQAEDRMILDAQSRLGNRWSAIAAMLPGRTEDAVKIRWKSLCR 248
BLAST of mRNA_H-paniculata_contig4878.12013.1 vs. uniprot
Match: A0A0W8DM41_PHYNI (Gamma-soluble NSF attachment protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DM41_PHYNI) HSP 1 Score: 207 bits (528), Expect = 5.630e-55 Identity = 93/150 (62.00%), Postives = 115/150 (76.67%), Query Frame = 1
Query: 559 PRRWQPSEDRRLAESVKLHGEANWKAIAAGVGSRNHVQCLQRWKKVLRPGLVKGQWSAKEDAVLMKLACSGYKNWGVLSNHMPGRTSKQCRERWYHHLDPSINKSAYTPREDKIIIETQARLGNKWSQIAARLPGRTENSIKIRCKALQR 1008
P+RW P ED +L E+V HGE NWK+IA V RNH QCLQRW KVL PGLVKG W +ED +L +L G KNWG ++ +PGRTSKQCRERWY+HLDPSI + Y+P ED++I++ QARLGN+WS IAA LPGRTE+++KIR K+L R
Sbjct: 112 PKRWTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPEEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCR 261
BLAST of mRNA_H-paniculata_contig4878.12013.1 vs. uniprot
Match: A0A2P4Y3D9_9STRA (Myb-like DNA-binding protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y3D9_9STRA) HSP 1 Score: 202 bits (515), Expect = 1.430e-54 Identity = 95/164 (57.93%), Postives = 119/164 (72.56%), Query Frame = 1
Query: 559 PRRWQPSEDRRLAESVKLHGEANWKAIAAGVGSRNHVQCLQRWKKVLRPGLVKGQWSAKEDAVLMKLACSGYKNWGVLSNHMPGRTSKQCRERWYHHLDPSINKSAYTPREDKIIIETQARLGNKWSQIAARLPGRTENSIKIRCKAL--QRRGTGAQSTSNSG 1044
P+RW ED +L E+V HGE NWK+IA V RNH QCLQRW KVL PGLVKG W ED +L +L G KNWG ++ +PGRTSKQCRERWY+HLDPSI + YT ED++I++ QARLGN+WS IAA LPGRTE+++KIR K+L R+G G + ++ G
Sbjct: 91 PKRWTQEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYTQEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCRVRKGQGRRGQADKG 254
BLAST of mRNA_H-paniculata_contig4878.12013.1 vs. uniprot
Match: A0A2D4BRV7_PYTIN (Myblike DNAbinding protein putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRV7_PYTIN) HSP 1 Score: 205 bits (521), Expect = 4.320e-54 Identity = 97/153 (63.40%), Postives = 116/153 (75.82%), Query Frame = 1
Query: 544 PNMKA-PRRWQPSEDRRLAESVKLHGEANWKAIAAGVGSRNHVQCLQRWKKVLRPGLVKGQWSAKEDAVLMKLACSGYKNWGVLSNHMPGRTSKQCRERWYHHLDPSINKSAYTPREDKIIIETQARLGNKWSQIAARLPGRTENSIKIRCKA 999
P KA PRRW ED L ++V+ H E NWKAIAA V RNH QCLQRW KVL PGLVKG WS ED +L +L G KNWG ++ +PGRTSKQCRERW++HLDP+I + AYTP ED+II+E QARLGN+WS IAA LPGRTE+++KIR K+
Sbjct: 216 PTRKANPRRWTKEEDDALRQAVENHKEKNWKAIAAQVPGRNHTQCLQRWTKVLAPGLVKGHWSPHEDELLKRLVAGGNKNWGEVAAKIPGRTSKQCRERWHNHLDPNIVRGAYTPEEDRIILEAQARLGNRWSVIAAMLPGRTEDAVKIRWKS 368 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4878.12013.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4878.12013.1 >prot_H-paniculata_contig4878.12013.1 ID=prot_H-paniculata_contig4878.12013.1|Name=mRNA_H-paniculata_contig4878.12013.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=660bp MVQPKRYLSKEDQDNNEWERPKRQNSGEQLARPRSRRLSSEESEYTTDEAback to top mRNA from alignment at H-paniculata_contig4878:4400..11828+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4878.12013.1 ID=mRNA_H-paniculata_contig4878.12013.1|Name=mRNA_H-paniculata_contig4878.12013.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7429bp|location=Sequence derived from alignment at H-paniculata_contig4878:4400..11828+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4878:4400..11828+ >mRNA_H-paniculata_contig4878.12013.1 ID=mRNA_H-paniculata_contig4878.12013.1|Name=mRNA_H-paniculata_contig4878.12013.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3960bp|location=Sequence derived from alignment at H-paniculata_contig4878:4400..11828+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |