prot_H-paniculata_contig4863.11990.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4863.11990.1
Unique Nameprot_H-paniculata_contig4863.11990.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length253
Homology
BLAST of mRNA_H-paniculata_contig4863.11990.1 vs. uniprot
Match: D7FWQ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWQ0_ECTSI)

HSP 1 Score: 258 bits (659), Expect = 1.370e-83
Identity = 141/236 (59.75%), Postives = 168/236 (71.19%), Query Frame = 0
Query:   17 LKLVLRNGREAHVSCSVESEGLDLLQGRLRAASVKGRGWASRLGFTARTIAVDLGNASVDVGALFHRRAIEFRTPPPSGTAVVVFDAVDFGNFLAHKFVRRATLAGRDFMFQRGDVFVDPVTGLVEFGGRWGDECVRVGLSQGITGAPQRGLVAKVSRVGGRGAAAEGHSTAEGELDALASAMGEYFNTLDLDLDGPRLRFLSLSFEGTSARDGRVKLELSIVVPKLPSVRAVSSF 252
            ++LVLRNGRE HVSCSV+S+ LDLLQGRLR ASV+GRGWASRLG TAR+I VD+G   +DVGALF  R ++F  PPPSG A+VVF A DFGNFLAH  +RR  +AGR F+F R  V VDP    V FGG WG E +R+ LSQ    AP   LV++V R    G     H +   + DA+AS M E+FN L++DLDGPRL F SLSFEG+    GRVKL L IVV KLPS+RAV+SF
Sbjct:    1 MRLVLRNGRETHVSCSVDSDALDLLQGRLRGASVRGRGWASRLGLTARSIDVDVGIVRLDVGALFRHRVLQFEQPPPSGNAIVVFSAEDFGNFLAHPLIRRTVVAGRSFVFDRQGVVVDPRKRTVAFGGVWGAEKLRIELSQAAARAP---LVSEVVRSVDDG----DHDSGLTDDDAIASDMSEFFNNLEVDLDGPRLSFSSLSFEGSGIEGGRVKLALGIVVRKLPSIRAVASF 229          
BLAST of mRNA_H-paniculata_contig4863.11990.1 vs. uniprot
Match: A0A2V0P4A6_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P4A6_9CHLO)

HSP 1 Score: 102 bits (254), Expect = 3.710e-22
Identity = 80/250 (32.00%), Postives = 124/250 (49.60%), Query Frame = 0
Query:    5 TAPLIEATACRVLKLVLRNGREAHVSCSVESEGLDLLQGRLRAASVKGRGWASRLGFTARTIAVDLGNASVDVGALFHRRAIEFRTPPPSGTAVVVFDAVDFGNFLAHKFVRRAT---LAGRDFMFQRGDVFVDPVT-----GLVEFGGRW-GDECVRVGLSQGITGAPQRGLVAKVSRVGGRGAAAEGHSTAEGELDALASAMGEYFNTLDLDLDGPRLRFLSLSFE-GTSARDGRVKLELSIVVPKLP 244
            TA L+E      L+  L+  R   V+  +  +   LL GR+ + +++G GW S L  TA+ +   +G A++D   +  R  I   T  P+GTA VVFD VDFGNFL H  V  A    + G  F+F R  V ++  +     GL+ F G W GD    + +++G   A  RG+ A    +G       G S++ G ++     +G +FN+L +DL+G  LR +S++   GT        L L + V + P
Sbjct:   61 TATLLERVTSLALRARLKEARS--VAADISCDAFSLLAGRVNSVAIRGEGWRSPLNLTAQLLEATVGAAALDYAQVLLRGRIVL-TNVPTGTARVVFDEVDFGNFLTHPLVTEAAKEAVRGSAFVFDRDSVRLEAPSRERPEGLIFFTGTWRGDNVELLPVARGA--AVGRGVQAHAIALG-----VGGRSSSAGVVE---DELGRFFNSLTVDLEGVELRLMSVTLSAGTGWAGAAADLRLQLTVKRFP 297          
BLAST of mRNA_H-paniculata_contig4863.11990.1 vs. uniprot
Match: A0A383VV08_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VV08_TETOB)

HSP 1 Score: 91.3 bits (225), Expect = 5.170e-18
Identity = 76/253 (30.04%), Postives = 114/253 (45.06%), Query Frame = 0
Query:    5 TAPLIEATACRVLKLVLRNGREAHVSCSVESEGLDLLQGRLRAASVKGRGWASRLGFTARTIAVDLGNASVDVGALFHRRAIEFRTPPPSGTAVVVFDAVDFGNFLAHKFVRRAT---LAGRDFMFQRGDVFVDPVT-----GLVEFGGRWGDECVRVGLSQGITGAPQRGLVAKVSRVGGRGAAAEGHSTAEGELDALAS----AMGEYFNTLDLDLDGPRLRFLSLSF-EGTSARDGRVKLELSIVVPKLP 244
            TA ++E   C  L+  L+  R   V  S+  +   LL GR+    + G GW S L  TA+ +   +G AS+D  A+  ++ I   T  P GTA V+F+A DFGNFL H  +  A    + G  F F +  V + P +     GLVEF G W  +  R  +         R L      V G+G  A     + G   + A      +  +F++L +DL G ++ F+SL+   G         L L + + K P
Sbjct:   59 TADILENVTCLALRARLKECRA--VKTSISCDTWSLLAGRVNGVKIHGEGWRSPLNLTAQVLEATVGEASLDPSAVLFKQQI-LLTNVPVGTARVMFNAADFGNFLVHPLMTEAAKEAVQGHAFAFDQASVRIQPPSAVPPEGLVEFTGTWRGDGQRYQV---------RLLPVSGGAVFGKGVQAHAMPLSIGARSSSAGIVEDCLSAFFSSLMVDLQGAQMSFMSLAILPGMGFAGAMADLNLRLELKKFP 299          
BLAST of mRNA_H-paniculata_contig4863.11990.1 vs. uniprot
Match: A0A7S1SVV4_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SVV4_9CHLO)

HSP 1 Score: 74.7 bits (182), Expect = 6.490e-12
Identity = 58/223 (26.01%), Postives = 99/223 (44.39%), Query Frame = 0
Query:   29 VSCSVESEGLDLLQGRLRAASVKGRGWASRLGFTARTIAVDLGNASVDVGALFHRRAIEFRTPPPSGTAVVVFDAVDFGNFLAHKFVRR---ATLAGRDFMFQRGDVFVDPVTG---LVEFGGRWGDECVRVGLSQGITGAPQRGLVAKVSRVGGRGAAAEGHSTAEGELDALASAMGEYFNTLDLDLDGPRLRFLSLSFEGTSARDGRV-KLELSIVVPKLP 244
            +   V+     LL G L    V+G GW + +G + R   + LG   +D+G     + I F T  P+G+A +VF++ DFGN   H  +++     + G+ F F    V +D   G   ++   G W  +  R  ++       +  + A +           G          +A+ +G++FN L LDLDGP + F S+       RD  V  + L++ + K+P
Sbjct:  115 IDAKVDCNTFGLLGGVLNGFLVRGLGWVTPMGMSVRLFEISLGETRIDIGNAIATQQIVF-TSTPTGSARLVFNSADFGNLFRHPLMKKIASTAVQGQRFDFDPHTVDIDTSVGRQGVIRVSGIWHGDGNRYDITVEPNEYGRVNVTASLVLPENELQFTNGVPQYTAAASVVANGLGQFFNNLSLDLDGPVMTFRSMQVR--KGRDAEVIDMMLNLKLMKMP 334          
BLAST of mRNA_H-paniculata_contig4863.11990.1 vs. uniprot
Match: A0A7S0A0N1_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A0N1_9DINO)

HSP 1 Score: 62.0 bits (149), Expect = 1.720e-8
Identity = 47/134 (35.07%), Postives = 74/134 (55.22%), Query Frame = 0
Query:   11 ATACRVLKLV--LRNGREAHVSCSVESEGLDLLQGRLRAASVKGRGWASRLGFTARTIAVDLGNASVDVGALFHRRAIEFR---TPPPSGTAVVVFDAVDFGNFLAHKFVRRAT--LAGRDFMFQRGDVFVDPV 137
            ++  R+L+L+  L   R + +   V+S   +LL+GR+ A  + G GW ++ G TAR + V    A+++  AL +R  +  R   T P  G A V+FDA+DFGNFL +  V  +   +  R  +F+R  V VD V
Sbjct:   14 SSVARLLELLVPLHLRRHSGIRAVVQSRLGELLRGRVDAVHLSGEGWQTKAGLTARRLTV----AALEGAALEYRDVLTGRITLTAPTLGWAEVLFDAIDFGNFLLYGPVAASAPEVGSRRMVFERHGVEVDVV 143          
BLAST of mRNA_H-paniculata_contig4863.11990.1 vs. uniprot
Match: K8F0L1_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8F0L1_9CHLO)

HSP 1 Score: 62.8 bits (151), Expect = 6.680e-8
Identity = 38/118 (32.20%), Postives = 59/118 (50.00%), Query Frame = 0
Query:    2 RCSTAPLIEATACRVLKLVLRNGREAHVSCSVESEGLDLL-QGRLRAASVKGRGWASRLGFTARTIAVDLGNASVDVGALFHRRAIEFRTPPPSGTAVVVFDAVDFGNFLAHKFVRRA 118
            R STA LIE  A  +L   L+  ++  V+ SV S+  + L +G++R   +KG  W+S+   T +++ + +G   VD G +     IE + P   G A +     DF NFL H     A
Sbjct:   54 RTSTAKLIETVASSILSFNLK--KQTSVTVSVNSDDFEALTRGKVRKVQIKGTDWSSKKNLTCKSLDISVGEVEVDYGKIVTTGRIEIKKPGGRGRAKLFMSFEDFRNFLKHPLTNEA 169          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4863.11990.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FWQ0_ECTSI1.370e-8359.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2V0P4A6_9CHLO3.710e-2232.00Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A383VV08_TETOB5.170e-1830.04Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A7S1SVV4_9CHLO6.490e-1226.01Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A7S0A0N1_9DINO1.720e-835.07Hypothetical protein (Fragment) n=1 Tax=Pyrodinium... [more]
K8F0L1_9CHLO6.680e-832.20Uncharacterized protein n=1 Tax=Bathycoccus prasin... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4863contigH-paniculata_contig4863:4999..7992 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4863.11990.1mRNA_H-paniculata_contig4863.11990.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4863 4918..8186 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4863.11990.1 ID=prot_H-paniculata_contig4863.11990.1|Name=mRNA_H-paniculata_contig4863.11990.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=253bp
MRCSTAPLIEATACRVLKLVLRNGREAHVSCSVESEGLDLLQGRLRAASV
KGRGWASRLGFTARTIAVDLGNASVDVGALFHRRAIEFRTPPPSGTAVVV
FDAVDFGNFLAHKFVRRATLAGRDFMFQRGDVFVDPVTGLVEFGGRWGDE
CVRVGLSQGITGAPQRGLVAKVSRVGGRGAAAEGHSTAEGELDALASAMG
EYFNTLDLDLDGPRLRFLSLSFEGTSARDGRVKLELSIVVPKLPSVRAVS
SF*
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