prot_H-paniculata_contig4846.11964.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4846.11964.1
Unique Nameprot_H-paniculata_contig4846.11964.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length294
Homology
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BLAST of mRNA_H-paniculata_contig4846.11964.1 vs. uniprot
Match: D7FVT8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVT8_ECTSI)

HSP 1 Score: 278 bits (710), Expect = 2.940e-90
Identity = 155/273 (56.78%), Postives = 184/273 (67.40%), Query Frame = 0 
Query:   22 LKVQGRDGKLHEFVVPPDRQEYYKNKILPRLVSSLDALRLTPPVTINRPAEEFSLGSAGAFFGFNRDASNLVLTWLSPDSWLELEGSCRAASTAVMNSMCWFSPGVMIGHSLRFRPDQRKVAYLRHRRAVERVAKAFQDLRRFARSPDSVFNPGATLSEIYSAEQRTGVVFPDEARASFTLFDGQARSTWLRAEGVIGGFKLLSLDQSVELMLEEACFRGALGKL-EFVPLADRRNSNAWLVAAVDDGRVCVVKPLSRPKIVARSWSGHLRVQ 293
            L+VQ RDG+           E           +    L+LT P      A   +   A +F   NRD +NL+L +L+P+SWLE+E +CRA   AV +S CW   GV  G        Q K  Y+R RRA+ RV+ AFQDLRRFARSP SVFNPGATL++  +AEQRTGV+FPDEARASF LFDGQARS WLR+EGVIGGF+LLSL +SV+LMLEEACFRG  G   EFVPLA+RRNSN WL A V  GRVCV+KPLSRPK+VA SWS +LRVQ
Sbjct:    8 LEVQARDGRRLNIETALPGGE----------CTPTTTLKLTLPAL----ARSEAASPAASFLRLNRDPANLLLGYLAPESWLEVEQACRAGRVAVASSGCWTDKGVGDG--------QGKAVYVRQRRALHRVSGAFQDLRRFARSPSSVFNPGATLADTMNAEQRTGVLFPDEARASFLLFDGQARSGWLRSEGVIGGFELLSLAESVDLMLEEACFRGESGPPPEFVPLANRRNSNEWLAAEVGGGRVCVIKPLSRPKVVASSWSHYLRVQ 258
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4846.11964.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVT8_ECTSI2.940e-9056.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4846contigH-paniculata_contig4846:4419..6147 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4846.11964.1mRNA_H-paniculata_contig4846.11964.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4846 4250..7375 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4846.11964.1 ID=prot_H-paniculata_contig4846.11964.1|Name=mRNA_H-paniculata_contig4846.11964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=294bp
MVKYEQGLDQRAGATSNTGLRLKVQGRDGKLHEFVVPPDRQEYYKNKILP
RLVSSLDALRLTPPVTINRPAEEFSLGSAGAFFGFNRDASNLVLTWLSPD
SWLELEGSCRAASTAVMNSMCWFSPGVMIGHSLRFRPDQRKVAYLRHRRA
VERVAKAFQDLRRFARSPDSVFNPGATLSEIYSAEQRTGVVFPDEARASF
TLFDGQARSTWLRAEGVIGGFKLLSLDQSVELMLEEACFRGALGKLEFVP
LADRRNSNAWLVAAVDDGRVCVVKPLSRPKIVARSWSGHLRVQ*
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