prot_H-paniculata_contig4839.11952.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig4839.11952.1
Unique Name	prot_H-paniculata_contig4839.11952.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	228

Homology

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BLAST of mRNA_H-paniculata_contig4839.11952.1 vs. uniprot
Match: D8LIL8_ECTSI (Nucleoside diphosphate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIL8_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 1.210e-69
Identity = 116/167 (69.46%), Postives = 131/167 (78.44%), Query Frame = 0

Query:    1 MMVNGLLCAFLAAVAPVAFGFIAPVHTGSFAAMANGHVAHAPFTTATRAMRKESPVMSMERSYIMVKPDGVQRGIVGAIISRFEQRGYKLAALKLKQADEALLRQHYKDLVDKPFFPKMMEYMISGPVVCMAWEGKDVVRMGRKMLGATNPLESEPGTIRGDFALEV 167
            MM   LLC  L  + P A GF+ P  + S  A  +G VAH   TTA  A+ +  P M+MERSYIM+KPDGVQRG+VG II+RFE+RGYKLA LKLKQADEALL++HYKDLVDKPFFPK++ YMISGPVVCMAWEGKDVV MGRKMLG TNPL S PGTIRGDF LEV
Sbjct:    1 MMAKTLLCG-LVTLLPAALGFVMPTASSSAFARGSG-VAHVSATTAPSAVSR--PTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEV 163

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BLAST of mRNA_H-paniculata_contig4839.11952.1 vs. uniprot
Match: A0A836CHD7_9STRA (Nucleoside diphosphate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD7_9STRA)

HSP 1 Score: 194 bits (494), Expect = 1.720e-59
Identity = 90/111 (81.08%), Postives = 102/111 (91.89%), Query Frame = 0

Query:   57 MSMERSYIMVKPDGVQRGIVGAIISRFEQRGYKLAALKLKQADEALLRQHYKDLVDKPFFPKMMEYMISGPVVCMAWEGKDVVRMGRKMLGATNPLESEPGTIRGDFALEV 167
            M+MERSYIM+KPDGVQRG+VG IISRFE+RGYKLAA+KLKQADE LL++HY+DL  KPFFPK+M YM+SGPVVCM WEGKDVV  GRKMLGATNPLES PGTIRGDF+L+V
Sbjct:   42 MAMERSYIMIKPDGVQRGLVGEIISRFEKRGYKLAAMKLKQADEDLLKEHYRDLASKPFFPKLMGYMLSGPVVCMCWEGKDVVAQGRKMLGATNPLESAPGTIRGDFSLDV 152

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BLAST of mRNA_H-paniculata_contig4839.11952.1 vs. uniprot
Match: A0A7S3HYI0_9SPIT (Nucleoside diphosphate kinase (Fragment) n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3HYI0_9SPIT)

HSP 1 Score: 182 bits (463), Expect = 9.580e-55
Identity = 83/117 (70.94%), Postives = 103/117 (88.03%), Query Frame = 0

Query:   51 RKESPVMSMERSYIMVKPDGVQRGIVGAIISRFEQRGYKLAALKLKQADEALLRQHYKDLVDKPFFPKMMEYMISGPVVCMAWEGKDVVRMGRKMLGATNPLESEPGTIRGDFALEV 167
            R  +P+M+MER+YIM+KPDGVQR +VG II+RFEQRGY+L ALKL QADE LLR+HY DLV+KPFFPK++ YM+SGPV CM W+G++ V+MGR+MLGATNP ES PGTIRGDF++EV
Sbjct:   39 RASAPLMAMERTYIMIKPDGVQRNLVGNIITRFEQRGYQLCALKLFQADEDLLREHYCDLVEKPFFPKLLSYMLSGPVTCMVWKGENAVKMGRQMLGATNPQESLPGTIRGDFSIEV 155

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BLAST of mRNA_H-paniculata_contig4839.11952.1 vs. uniprot
Match: A0A7R9VG66_9STRA (Nucleoside diphosphate kinase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VG66_9STRA)

HSP 1 Score: 179 bits (455), Expect = 6.860e-54
Identity = 83/125 (66.40%), Postives = 100/125 (80.00%), Query Frame = 0

Query:   43 FTTATRAMRKESPVMSMERSYIMVKPDGVQRGIVGAIISRFEQRGYKLAALKLKQADEALLRQHYKDLVDKPFFPKMMEYMISGPVVCMAWEGKDVVRMGRKMLGATNPLESEPGTIRGDFALEV 167
            F   +R+    S  M+MER+YIM+KPDGVQRGIVG I+SRFE +GY L A+K K A + LL +HYKDLV+KPFFPK+ +YM+SGPVVCM WEG++ V  GRKMLGATNPLES PGTIRGDF +EV
Sbjct:    6 FGAGSRSGASSSLSMAMERTYIMIKPDGVQRGIVGNIVSRFETKGYHLVAMKTKMASKELLEEHYKDLVEKPFFPKLRDYMLSGPVVCMVWEGREAVSTGRKMLGATNPLESAPGTIRGDFCIEV 130

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BLAST of mRNA_H-paniculata_contig4839.11952.1 vs. uniprot
Match: A0A7S2EER7_TRICV (Nucleoside diphosphate kinase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EER7_TRICV)

HSP 1 Score: 180 bits (457), Expect = 2.630e-53
Identity = 89/129 (68.99%), Postives = 101/129 (78.29%), Query Frame = 0

Query:   43 FTTATRAMRKESPV----MSMERSYIMVKPDGVQRGIVGAIISRFEQRGYKLAALKLKQADEALLRQHYKDLVDKPFFPKMMEYMISGPVVCMAWEGKDVVRMGRKMLGATNPLESEPGTIRGDFALEV 167
            FT+A  A   +S      M+MER+YIM+KPDGVQRGIVG I+SRFE +GY L ALK K A   LL QHYKDLVDKPFFPK+ +YM+SGPVVCM WEGK+ V  GRKMLGATNPLES PGTIRGDF +EV
Sbjct:   68 FTSAVAAPVAKSSATELSMAMERTYIMIKPDGVQRGIVGNILSRFESKGYHLVALKTKMATAELLDQHYKDLVDKPFFPKLRDYMLSGPVVCMVWEGKEAVTTGRKMLGATNPLESAPGTIRGDFCVEV 196

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BLAST of mRNA_H-paniculata_contig4839.11952.1 vs. uniprot
Match: A0A1E7FT17_9STRA (Nucleoside diphosphate kinase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FT17_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.300e-52
Identity = 81/110 (73.64%), Postives = 94/110 (85.45%), Query Frame = 0

Query:   58 SMERSYIMVKPDGVQRGIVGAIISRFEQRGYKLAALKLKQADEALLRQHYKDLVDKPFFPKMMEYMISGPVVCMAWEGKDVVRMGRKMLGATNPLESEPGTIRGDFALEV 167
            S ER+YIM+KPDGVQRGIVG IISRFE +GYKL+A+K K+A + LL  HY DLV+KPFFPKM +YM+SGPVVCM WEGK+ V  GRKMLGATNPLES PGTIRGD+ +EV
Sbjct:   26 SAERTYIMIKPDGVQRGIVGNIISRFETKGYKLSAMKTKEASKELLETHYSDLVEKPFFPKMRDYMMSGPVVCMVWEGKEAVSTGRKMLGATNPLESNPGTIRGDYCIEV 135

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BLAST of mRNA_H-paniculata_contig4839.11952.1 vs. uniprot
Match: A0A7S2YRX6_9STRA (Nucleoside diphosphate kinase n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YRX6_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.340e-52
Identity = 84/120 (70.00%), Postives = 96/120 (80.00%), Query Frame = 0

Query:   51 RKESPVMSM---ERSYIMVKPDGVQRGIVGAIISRFEQRGYKLAALKLKQADEALLRQHYKDLVDKPFFPKMMEYMISGPVVCMAWEGKDVVRMGRKMLGATNPLESEPGTIRGDFALEV 167
            R     +SM   ER+YIM+KPDGVQRG+VG I+SRFE +GYKL A+K KQAD  LL QHY DLV+KPFFPK+ EYM+SGPV CM WEGK+ V  GRKMLGATNPLES PGTIRGDF +EV
Sbjct:   28 RSNGSTLSMSASERTYIMIKPDGVQRGLVGNIVSRFETKGYKLVAMKTKQADADLLEQHYIDLVEKPFFPKLKEYMLSGPVCCMVWEGKEAVSTGRKMLGATNPLESAPGTIRGDFCIEV 147

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BLAST of mRNA_H-paniculata_contig4839.11952.1 vs. uniprot
Match: A0A4P9X3G1_9FUNG (Nucleoside diphosphate kinase n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9X3G1_9FUNG)

HSP 1 Score: 174 bits (441), Expect = 4.790e-52
Identity = 81/111 (72.97%), Postives = 94/111 (84.68%), Query Frame = 0

Query:   57 MSMERSYIMVKPDGVQRGIVGAIISRFEQRGYKLAALKLKQADEALLRQHYKDLVDKPFFPKMMEYMISGPVVCMAWEGKDVVRMGRKMLGATNPLESEPGTIRGDFALEV 167
            MS ER+YIMVKPDGV+RG+VG IISRFEQRGYKLAA++L +AD+ALL QHY DL +KPFFP++M YM SGPVV M WEGKD VR GR +LG TNPL S PGTIRGDF ++V
Sbjct:    1 MSQERTYIMVKPDGVERGLVGKIISRFEQRGYKLAAIRLLKADQALLSQHYADLAEKPFFPRLMAYMTSGPVVGMVWEGKDAVRTGRTLLGETNPLNSAPGTIRGDFCIDV 111

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BLAST of mRNA_H-paniculata_contig4839.11952.1 vs. uniprot
Match: A0A7S2I9P5_9STRA (Nucleoside diphosphate kinase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I9P5_9STRA)

HSP 1 Score: 175 bits (444), Expect = 5.930e-52
Identity = 80/108 (74.07%), Postives = 94/108 (87.04%), Query Frame = 0

Query:   60 ERSYIMVKPDGVQRGIVGAIISRFEQRGYKLAALKLKQADEALLRQHYKDLVDKPFFPKMMEYMISGPVVCMAWEGKDVVRMGRKMLGATNPLESEPGTIRGDFALEV 167
            ER+YIM+KPDGVQRGIVG I+SRFEQ+GYKL A+K KQA + +L QHY+DLV+KPFFP + +YM+SGPVVCM WEGK+ V  GRKMLGATNPLES PGTIRGDF +EV
Sbjct:   43 ERTYIMIKPDGVQRGIVGNIVSRFEQKGYKLVAMKTKQATKEILDQHYQDLVEKPFFPGLRDYMMSGPVVCMIWEGKEAVSTGRKMLGATNPLESNPGTIRGDFCVEV 150

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BLAST of mRNA_H-paniculata_contig4839.11952.1 vs. uniprot
Match: R1G1W3_EMIHU (Nucleoside diphosphate kinase n=2 Tax=Eukaryota TaxID=2759 RepID=R1G1W3_EMIHU)

HSP 1 Score: 174 bits (440), Expect = 7.000e-52
Identity = 80/111 (72.07%), Postives = 96/111 (86.49%), Query Frame = 0

Query:   57 MSMERSYIMVKPDGVQRGIVGAIISRFEQRGYKLAALKLKQADEALLRQHYKDLVDKPFFPKMMEYMISGPVVCMAWEGKDVVRMGRKMLGATNPLESEPGTIRGDFALEV 167
            M MER+YIM+KPDGVQRG+VG I+ RFEQRGY+L ALKL QADEALLRQHY DLV+K FFP ++ YM+SGPV CM W+G++ V+MGR+MLGATNP ES PGTIRGDF++ V
Sbjct:    1 MEMERTYIMIKPDGVQRGLVGNIVQRFEQRGYQLQALKLFQADEALLRQHYCDLVEKKFFPDLLSYMLSGPVCCMVWQGENAVKMGRQMLGATNPQESLPGTIRGDFSIVV 111

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig4839.11952.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig4839.11952.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LIL8_ECTSI	1.210e-69	69.46	Nucleoside diphosphate kinase n=2 Tax=Ectocarpus T...	[more]
A0A836CHD7_9STRA	1.720e-59	81.08	Nucleoside diphosphate kinase n=1 Tax=Tribonema mi...	[more]
A0A7S3HYI0_9SPIT	9.580e-55	70.94	Nucleoside diphosphate kinase (Fragment) n=2 Tax=C...	[more]
A0A7R9VG66_9STRA	6.860e-54	66.40	Nucleoside diphosphate kinase n=1 Tax=Pseudictyota...	[more]
A0A7S2EER7_TRICV	2.630e-53	68.99	Nucleoside diphosphate kinase n=1 Tax=Trieres chin...	[more]
A0A1E7FT17_9STRA	1.300e-52	73.64	Nucleoside diphosphate kinase n=1 Tax=Fragilariops...	[more]
A0A7S2YRX6_9STRA	1.340e-52	70.00	Nucleoside diphosphate kinase n=2 Tax=Amphiprora p...	[more]
A0A4P9X3G1_9FUNG	4.790e-52	72.97	Nucleoside diphosphate kinase n=1 Tax=Caulochytriu...	[more]
A0A7S2I9P5_9STRA	5.930e-52	74.07	Nucleoside diphosphate kinase n=1 Tax=Helicotheca ...	[more]
R1G1W3_EMIHU	7.000e-52	72.07	Nucleoside diphosphate kinase n=2 Tax=Eukaryota Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001564	Nucleoside diphosphate kinase	PRINTS	PR01243	NUCDPKINASE	coord: 106..125 score: 47.74 coord: 126..143 score: 58.87 coord: 147..163 score: 73.72 coord: 62..84 score: 62.34
IPR034907	Nucleoside diphosphate kinase-like domain	SMART	SM00562	ndk_5	coord: 59..178 e-value: 1.0E-47 score: 174.5
IPR034907	Nucleoside diphosphate kinase-like domain	PFAM	PF00334	NDK	coord: 60..167 e-value: 6.2E-39 score: 133.1
IPR036850	Nucleoside diphosphate kinase-like domain superfamily	GENE3D	3.30.70.141		coord: 56..176 e-value: 5.9E-43 score: 148.0
IPR036850	Nucleoside diphosphate kinase-like domain superfamily	SUPERFAMILY	54919	Nucleoside diphosphate kinase, NDK	coord: 57..167
None	No IPR available	PANTHER	PTHR11349	NUCLEOSIDE DIPHOSPHATE KINASE	coord: 45..167
None	No IPR available	PANTHER	PTHR11349:SF44	NUCLEOSIDE DIPHOSPHATE KINASE II, CHLOROPLASTIC	coord: 45..167
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 5..15
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 21..227
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..4
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..20 score: 0.783
None	No IPR available	TMHMM	TMhelix		coord: 5..27

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig4839	contig	H-paniculata_contig4839:3646..8035 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig4839.11952.1	mRNA_H-paniculata_contig4839.11952.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig4839 3594..8548 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig4839.11952.1 ID=prot_H-paniculata_contig4839.11952.1|Name=mRNA_H-paniculata_contig4839.11952.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=228bp
MMVNGLLCAFLAAVAPVAFGFIAPVHTGSFAAMANGHVAHAPFTTATRAM
RKESPVMSMERSYIMVKPDGVQRGIVGAIISRFEQRGYKLAALKLKQADE
ALLRQHYKDLVDKPFFPKMMEYMISGPVVCMAWEGKDVVRMGRKMLGATN
PLESEPGTIRGDFALEVRGRRQMKSILRQPCWSFSGERWWNHEVLAVTAQ
LDWANGMTPWRYSRLQNNRTVLHAIQL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001564	Nucleoside_diP_kinase
IPR034907	NDK-like_dom
IPR036850	NDK-like_dom_sf