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Homology
BLAST of mRNA_H-paniculata_contig4839.11952.1 vs. uniprot
Match: D8LIL8_ECTSI (Nucleoside diphosphate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIL8_ECTSI) HSP 1 Score: 223 bits (568), Expect = 6.920e-68 Identity = 116/167 (69.46%), Postives = 131/167 (78.44%), Query Frame = 2
Query: 53 MMVNGLLCAFLAAVAPVAFGFIAPVHTGSFAAMANGHVAHAPFTTATRAMRKESPVMSMERSYIMVKPDGVQRGIVGAIISRFEQRGYKLAALKLKQADEALLRQHYKDLVDKPFFPKMMEYMISGPVVCMAWEGKDVVRMGRKMLGATNPLESEPGTIRGDFALEV 553
MM LLC L + P A GF+ P + S A +G VAH TTA A+ + P M+MERSYIM+KPDGVQRG+VG II+RFE+RGYKLA LKLKQADEALL++HYKDLVDKPFFPK++ YMISGPVVCMAWEGKDVV MGRKMLG TNPL S PGTIRGDF LEV
Sbjct: 1 MMAKTLLCG-LVTLLPAALGFVMPTASSSAFARGSG-VAHVSATTAPSAVSR--PTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEV 163
BLAST of mRNA_H-paniculata_contig4839.11952.1 vs. uniprot
Match: A0A836CHD7_9STRA (Nucleoside diphosphate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD7_9STRA) HSP 1 Score: 194 bits (494), Expect = 5.720e-57 Identity = 90/111 (81.08%), Postives = 102/111 (91.89%), Query Frame = 2
Query: 221 MSMERSYIMVKPDGVQRGIVGAIISRFEQRGYKLAALKLKQADEALLRQHYKDLVDKPFFPKMMEYMISGPVVCMAWEGKDVVRMGRKMLGATNPLESEPGTIRGDFALEV 553
M+MERSYIM+KPDGVQRG+VG IISRFE+RGYKLAA+KLKQADE LL++HY+DL KPFFPK+M YM+SGPVVCM WEGKDVV GRKMLGATNPLES PGTIRGDF+L+V
Sbjct: 42 MAMERSYIMIKPDGVQRGLVGEIISRFEKRGYKLAAMKLKQADEDLLKEHYRDLASKPFFPKLMGYMLSGPVVCMCWEGKDVVAQGRKMLGATNPLESAPGTIRGDFSLDV 152
BLAST of mRNA_H-paniculata_contig4839.11952.1 vs. uniprot
Match: A0A7S3HYI0_9SPIT (Nucleoside diphosphate kinase (Fragment) n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3HYI0_9SPIT) HSP 1 Score: 182 bits (463), Expect = 2.690e-52 Identity = 83/117 (70.94%), Postives = 103/117 (88.03%), Query Frame = 2
Query: 203 RKESPVMSMERSYIMVKPDGVQRGIVGAIISRFEQRGYKLAALKLKQADEALLRQHYKDLVDKPFFPKMMEYMISGPVVCMAWEGKDVVRMGRKMLGATNPLESEPGTIRGDFALEV 553
R +P+M+MER+YIM+KPDGVQR +VG II+RFEQRGY+L ALKL QADE LLR+HY DLV+KPFFPK++ YM+SGPV CM W+G++ V+MGR+MLGATNP ES PGTIRGDF++EV
Sbjct: 39 RASAPLMAMERTYIMIKPDGVQRNLVGNIITRFEQRGYQLCALKLFQADEDLLREHYCDLVEKPFFPKLLSYMLSGPVTCMVWKGENAVKMGRQMLGATNPQESLPGTIRGDFSIEV 155
BLAST of mRNA_H-paniculata_contig4839.11952.1 vs. uniprot
Match: A0A7S2EER7_TRICV (Nucleoside diphosphate kinase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EER7_TRICV) HSP 1 Score: 183 bits (464), Expect = 6.530e-52 Identity = 103/178 (57.87%), Postives = 117/178 (65.73%), Query Frame = 2
Query: 32 QTDNRGSMMVNGLLCAFLAAVAPVAFGFIAPVHTGSFAAMANGHVAHAPFTTATRAMRKESPV----MSMERSYIMVKPDGVQRGIVGAIISRFEQRGYKLAALKLKQADEALLRQHYKDLVDKPFFPKMMEYMISGPVVCMAWEGKDVVRMGRKMLGATNPLESEPGTIRGDFALEV 553
Q + G+M L A L A A AF AP T V FT+A A +S M+MER+YIM+KPDGVQRGIVG I+SRFE +GY L ALK K A LL QHYKDLVDKPFFPK+ +YM+SGPVVCM WEGK+ V GRKMLGATNPLES PGTIRGDF +EV
Sbjct: 31 QPERNGTMKTVAFLYAALLAGAADAF---APTST---------FVGRPAFTSAVAAPVAKSSATELSMAMERTYIMIKPDGVQRGIVGNILSRFESKGYHLVALKTKMATAELLDQHYKDLVDKPFFPKLRDYMLSGPVVCMVWEGKEAVTTGRKMLGATNPLESAPGTIRGDFCVEV 196
BLAST of mRNA_H-paniculata_contig4839.11952.1 vs. uniprot
Match: A0A7R9VG66_9STRA (Nucleoside diphosphate kinase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VG66_9STRA) HSP 1 Score: 179 bits (455), Expect = 1.830e-51 Identity = 83/125 (66.40%), Postives = 100/125 (80.00%), Query Frame = 2
Query: 179 FTTATRAMRKESPVMSMERSYIMVKPDGVQRGIVGAIISRFEQRGYKLAALKLKQADEALLRQHYKDLVDKPFFPKMMEYMISGPVVCMAWEGKDVVRMGRKMLGATNPLESEPGTIRGDFALEV 553
F +R+ S M+MER+YIM+KPDGVQRGIVG I+SRFE +GY L A+K K A + LL +HYKDLV+KPFFPK+ +YM+SGPVVCM WEG++ V GRKMLGATNPLES PGTIRGDF +EV
Sbjct: 6 FGAGSRSGASSSLSMAMERTYIMIKPDGVQRGIVGNIVSRFETKGYHLVAMKTKMASKELLEEHYKDLVEKPFFPKLRDYMLSGPVVCMVWEGREAVSTGRKMLGATNPLESAPGTIRGDFCIEV 130
BLAST of mRNA_H-paniculata_contig4839.11952.1 vs. uniprot
Match: A0A1E7FT17_9STRA (Nucleoside diphosphate kinase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FT17_9STRA) HSP 1 Score: 176 bits (447), Expect = 3.320e-50 Identity = 81/110 (73.64%), Postives = 94/110 (85.45%), Query Frame = 2
Query: 224 SMERSYIMVKPDGVQRGIVGAIISRFEQRGYKLAALKLKQADEALLRQHYKDLVDKPFFPKMMEYMISGPVVCMAWEGKDVVRMGRKMLGATNPLESEPGTIRGDFALEV 553
S ER+YIM+KPDGVQRGIVG IISRFE +GYKL+A+K K+A + LL HY DLV+KPFFPKM +YM+SGPVVCM WEGK+ V GRKMLGATNPLES PGTIRGD+ +EV
Sbjct: 26 SAERTYIMIKPDGVQRGIVGNIISRFETKGYKLSAMKTKEASKELLETHYSDLVEKPFFPKMRDYMMSGPVVCMVWEGKEAVSTGRKMLGATNPLESNPGTIRGDYCIEV 135
BLAST of mRNA_H-paniculata_contig4839.11952.1 vs. uniprot
Match: A0A7S2YRX6_9STRA (Nucleoside diphosphate kinase n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YRX6_9STRA) HSP 1 Score: 177 bits (448), Expect = 3.440e-50 Identity = 84/120 (70.00%), Postives = 96/120 (80.00%), Query Frame = 2
Query: 203 RKESPVMSM---ERSYIMVKPDGVQRGIVGAIISRFEQRGYKLAALKLKQADEALLRQHYKDLVDKPFFPKMMEYMISGPVVCMAWEGKDVVRMGRKMLGATNPLESEPGTIRGDFALEV 553
R +SM ER+YIM+KPDGVQRG+VG I+SRFE +GYKL A+K KQAD LL QHY DLV+KPFFPK+ EYM+SGPV CM WEGK+ V GRKMLGATNPLES PGTIRGDF +EV
Sbjct: 28 RSNGSTLSMSASERTYIMIKPDGVQRGLVGNIVSRFETKGYKLVAMKTKQADADLLEQHYIDLVEKPFFPKLKEYMLSGPVCCMVWEGKEAVSTGRKMLGATNPLESAPGTIRGDFCIEV 147
BLAST of mRNA_H-paniculata_contig4839.11952.1 vs. uniprot
Match: A0A7S2I9P5_9STRA (Nucleoside diphosphate kinase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I9P5_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.050e-49 Identity = 89/158 (56.33%), Postives = 109/158 (68.99%), Query Frame = 2
Query: 230 ERSYIMVKPDGVQRGIVGAIISRFEQRGYKLAALKLKQADEALLRQHYKDLVDKPFFPKMMEYMISGPVVCMAWEGKDVVRMGRKMLGATNPLESEPGTIRGDFALEV-----RGRRQMKSILRQPCWSFSGERWWNHEVLAVTAQLDWANGMTPWRY 688
ER+YIM+KPDGVQRGIVG I+SRFEQ+GYKL A+K KQA + +L QHY+DLV+KPFFP + +YM+SGPVVCM WEGK+ V GRKMLGATNPLES PGTIRGDF +EV G + + LR+ W+ L +DW + W Y
Sbjct: 43 ERTYIMIKPDGVQRGIVGNIVSRFEQKGYKLVAMKTKQATKEILDQHYQDLVEKPFFPGLRDYMMSGPVVCMIWEGKEAVSTGRKMLGATNPLESNPGTIRGDFCVEVGRNICHGSDSVDNALREI------GLWFEDSEL-----IDWEDHSKDWVY 189
BLAST of mRNA_H-paniculata_contig4839.11952.1 vs. uniprot
Match: A0A4P9X3G1_9FUNG (Nucleoside diphosphate kinase n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9X3G1_9FUNG) HSP 1 Score: 174 bits (441), Expect = 1.170e-49 Identity = 81/111 (72.97%), Postives = 94/111 (84.68%), Query Frame = 2
Query: 221 MSMERSYIMVKPDGVQRGIVGAIISRFEQRGYKLAALKLKQADEALLRQHYKDLVDKPFFPKMMEYMISGPVVCMAWEGKDVVRMGRKMLGATNPLESEPGTIRGDFALEV 553
MS ER+YIMVKPDGV+RG+VG IISRFEQRGYKLAA++L +AD+ALL QHY DL +KPFFP++M YM SGPVV M WEGKD VR GR +LG TNPL S PGTIRGDF ++V
Sbjct: 1 MSQERTYIMVKPDGVERGLVGKIISRFEQRGYKLAAIRLLKADQALLSQHYADLAEKPFFPRLMAYMTSGPVVGMVWEGKDAVRTGRTLLGETNPLNSAPGTIRGDFCIDV 111
BLAST of mRNA_H-paniculata_contig4839.11952.1 vs. uniprot
Match: R1G1W3_EMIHU (Nucleoside diphosphate kinase n=2 Tax=Eukaryota TaxID=2759 RepID=R1G1W3_EMIHU) HSP 1 Score: 174 bits (440), Expect = 1.700e-49 Identity = 80/111 (72.07%), Postives = 96/111 (86.49%), Query Frame = 2
Query: 221 MSMERSYIMVKPDGVQRGIVGAIISRFEQRGYKLAALKLKQADEALLRQHYKDLVDKPFFPKMMEYMISGPVVCMAWEGKDVVRMGRKMLGATNPLESEPGTIRGDFALEV 553
M MER+YIM+KPDGVQRG+VG I+ RFEQRGY+L ALKL QADEALLRQHY DLV+K FFP ++ YM+SGPV CM W+G++ V+MGR+MLGATNP ES PGTIRGDF++ V
Sbjct: 1 MEMERTYIMIKPDGVQRGLVGNIVQRFEQRGYQLQALKLFQADEALLRQHYCDLVEKKFFPDLLSYMLSGPVCCMVWQGENAVKMGRQMLGATNPQESLPGTIRGDFSIVV 111
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 221.1 |
| Seed ortholog evalue | 5.3e-55 |
| Seed eggNOG ortholog | 2880.D8LIL8 |
| Preferred name | NME3 |
| KEGG rclass | RC00002 |
| KEGG ko | ko:K00940 |
| KEGG Reaction | R00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895 |
| KEGG Pathway | ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016 |
| KEGG Module | M00049,M00050,M00052,M00053 |
| Hectar predicted targeting category | chloroplast |
| GOs | GO:0000166,GO:0000278,GO:0000287,GO:0000976,GO:0000977,GO:0001012,GO:0001067,GO:0001101,GO:0001667,GO:0001678,GO:0001726,GO:0001775,GO:0001882,GO:0001883,GO:0002009,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002682,GO:0002683,GO:0002761,GO:0002762,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003700,GO:0003824,GO:0004518,GO:0004536,GO:0004550,GO:0004672,GO:0004674,GO:0005488,GO:0005504,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005758,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005874,GO:0005880,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006183,GO:0006213,GO:0006220,GO:0006221,GO:0006228,GO:0006241,GO:0006259,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006915,GO:0006928,GO:0006950,GO:0006955,GO:0006974,GO:0006979,GO:0007017,GO:0007049,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007166,GO:0007186,GO:0007187,GO:0007188,GO:0007189,GO:0007229,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007424,GO:0007427,GO:0007589,GO:0007595,GO:0008017,GO:0008092,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0008284,GO:0008285,GO:0008289,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009132,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009147,GO:0009148,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010631,GO:0010720,GO:0010941,GO:0010975,GO:0010976,GO:0012501,GO:0012505,GO:0014070,GO:0014074,GO:0014075,GO:0015630,GO:0015631,GO:0015949,GO:0016020,GO:0016043,GO:0016192,GO:0016301,GO:0016310,GO:0016333,GO:0016334,GO:0016477,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0016787,GO:0016788,GO:0017076,GO:0018105,GO:0018130,GO:0018193,GO:0018209,GO:0019001,GO:0019205,GO:0019215,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019725,GO:0019867,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0019933,GO:0019935,GO:0021537,GO:0021543,GO:0021761,GO:0021766,GO:0022008,GO:0022607,GO:0022610,GO:0023052,GO:0030027,GO:0030141,GO:0030154,GO:0030554,GO:0030856,GO:0030858,GO:0030879,GO:0030900,GO:0031090,GO:0031252,GO:0031253,GO:0031256,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031344,GO:0031346,GO:0031406,GO:0031410,GO:0031966,GO:0031967,GO:0031968,GO:0031970,GO:0031974,GO:0031975,GO:0031982,GO:0031983,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0032587,GO:0032940,GO:0033293,GO:0033500,GO:0033554,GO:0033574,GO:0033993,GO:0034284,GO:0034330,GO:0034332,GO:0034404,GO:0034599,GO:0034641,GO:0034654,GO:0034774,GO:0035152,GO:0035556,GO:0035639,GO:0035690,GO:0036094,GO:0036211,GO:0036230,GO:0040011,GO:0042119,GO:0042127,GO:0042221,GO:0042278,GO:0042451,GO:0042455,GO:0042493,GO:0042592,GO:0042593,GO:0042802,GO:0042981,GO:0042995,GO:0043015,GO:0043021,GO:0043024,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0043388,GO:0043412,GO:0043434,GO:0043565,GO:0043933,GO:0044085,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044877,GO:0045055,GO:0045216,GO:0045321,GO:0045595,GO:0045596,GO:0045597,GO:0045604,GO:0045606,GO:0045616,GO:0045618,GO:0045637,GO:0045638,GO:0045664,GO:0045666,GO:0045682,GO:0045684,GO:0045893,GO:0045935,GO:0045944,GO:0046036,GO:0046039,GO:0046051,GO:0046128,GO:0046129,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046683,GO:0046777,GO:0046872,GO:0046903,GO:0046939,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048699,GO:0048729,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0050678,GO:0050679,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050878,GO:0050896,GO:0051093,GO:0051094,GO:0051098,GO:0051099,GO:0051101,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051252,GO:0051254,GO:0051259,GO:0051591,GO:0051674,GO:0051716,GO:0051960,GO:0051962,GO:0055082,GO:0055086,GO:0060205,GO:0060255,GO:0060284,GO:0060322,GO:0060416,GO:0060429,GO:0060541,GO:0060548,GO:0061508,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070542,GO:0070887,GO:0071229,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071396,GO:0071398,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0072522,GO:0072527,GO:0072528,GO:0080090,GO:0090130,GO:0090132,GO:0090304,GO:0090305,GO:0090407,GO:0097159,GO:0097367,GO:0097708,GO:0098588,GO:0098590,GO:0098805,GO:0099080,GO:0099081,GO:0099503,GO:0099512,GO:0099513,GO:0101002,GO:0120025,GO:0120035,GO:0120038,GO:0140096,GO:0140097,GO:0140110,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901654,GO:1901657,GO:1901659,GO:1901698,GO:1901700,GO:1901701,GO:1902105,GO:1902106,GO:1902680,GO:1903506,GO:1903508,GO:1903706,GO:1903707,GO:1904813,GO:1990837,GO:2000026,GO:2000112,GO:2001141 |
| EggNOG free text desc. | Nucleoside diphosphate kinase |
| EggNOG OGs | COG0105@1,KOG0888@2759 |
| Ec32 ortholog description | flagellar associated protein, nucleoside diphosphate kinase-like protein |
| Ec32 ortholog | Ec-11_004330.1 |
| EC | 2.7.4.6 |
| COG Functional cat. | F |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko04131 |
| Exons | 3 |
| Model size | 1249 |
| Cds size | 684 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4839.11952.1 >prot_H-paniculata_contig4839.11952.1 ID=prot_H-paniculata_contig4839.11952.1|Name=mRNA_H-paniculata_contig4839.11952.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=228bp
MMVNGLLCAFLAAVAPVAFGFIAPVHTGSFAAMANGHVAHAPFTTATRAM
RKESPVMSMERSYIMVKPDGVQRGIVGAIISRFEQRGYKLAALKLKQADE
ALLRQHYKDLVDKPFFPKMMEYMISGPVVCMAWEGKDVVRMGRKMLGATN
PLESEPGTIRGDFALEVRGRRQMKSILRQPCWSFSGERWWNHEVLAVTAQ
LDWANGMTPWRYSRLQNNRTVLHAIQL* back to topmRNA from alignment at H-paniculata_contig4839:3594..8548+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4839.11952.1 ID=mRNA_H-paniculata_contig4839.11952.1|Name=mRNA_H-paniculata_contig4839.11952.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4955bp|location=Sequence derived from alignment at H-paniculata_contig4839:3594..8548+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCTCAATTCCCAGCCAGTACATCATCCTGTACAGACAGACAATAGGGGAA
GTATGATGGTGAATGGCCTACTGTGTGCCTTCTTGGCGGCAGTTGCACCT
GTTGCCTTTGGGTTCATAGCCCCTGTTCACACCGGTTCCTTTGCCGCAAT
GGCCAACGGCCACGTAGCGCATGCTCCCTTCACCACAGCAACAAGGGCTA
TGAGGAAGGAGTCGCCGGTAATGTCCATGGAGAGGTCGTACATCATGGTC
AAACCGGATGGCGTACAGCGTGGGTGAGTAATCGGCGCGAGATGCGAGCA
GAGAACAGTGAAATGTTATCGTCGAGAAGTTGAGTGTGCTTGATCGGGTT
CGGGTGGTGTGATACGCAGTGATCGTGCGCGTGTAGCTAGACGATGGGAA
TTCATGTGTTGTACAGTCAGCAGCAGAGGATACTTTCAACCGTCTTCACA
TGTACCACTTGCATGTCCTTTGAAAGTTTATCATGAGGACTGAGATACGG
ACTACACAATTTGTTCTGCTGATAGTTGGAGGTGATGCTGAATCGGAAGC
CGGCATTCGAGTCACAAGTCTCGAGTCCAAATTTTGCGAGAAGAAGGTTG
GTGGGTTACTCGATAAGCTCTCGTTTCCTGGTTGACTTGCACATCTCAGT
TCTGCTCAATGGCCAATGAGTCGTATACAATGAAATTTGATTTGATGCAA
CCTCTCGGGTATGGATTCATAATGCACTCGGGAGCTCCAACTATCCTAGT
TTCAAAATCCCGTGTTTGGAGCTCTGTATCTTCGCGCAACTTGACAATCC
AAGTGAACATTACTGGTGAACTCACCAGATGTGTTCTGGCGTGTGTGCGA
CGAACGTCCACCTCATGAAACGTTCCCTATCGTTTTTTTATACTAGGGCA
CTCGTCATGGTTGGCCATGTATGCTTCACCAATATATATATATGTTGGAG
TCGTACTTCGCAGCACTTATTTGATGAGAAAATGATGTAAACTTCTACTA
ACCTGTGCCATGGAATCTGTTTCTCTCTTAGACCTTAATCCGTTAGGAAC
CGAACCTCGAAGCCGCCGCAATATAGATTCACTTGGACTTTTCGCATTTA
ATAACGATTACGTCGGCCTAATGCTCAATAAGTTGTACACAGCTGGTCAA
GGTGATTTTTTCTCGTAGATTTAGTCTAAGGACCGGACGCGTATATACGT
GTTTTTCGCACACATGATACCATCGCTGTTCAGCGGGTAACAAATTTGAA
GTGGTTGATAGTCTACTTTCCCTTGAAATGAATCTACATCCTTTGCCAGT
GAAAATGCTTCATAGTAGCCCTTTAGTCACTAGACGACAACCACCAAGGT
ACGGTTATGCTACTGCCTTCGATTTATTAGTAGGGGCCAGTAAAAGGAAT
GCAAATACGTGAGATTGTCAGAAAAACGTGTAGCGGAACTTTTTCACTTA
CTAGTAGGTCATTAGTTGATTGTGAGGCCGTTGTTCATTTCAGGTTCTCA
TACCATGATTTCAACATCGCGTAACACTGACGTCGCGACGGACTACTGTT
CGTGTTTTCATCGGTAAGGCATGTCATCCGAACACCTTATCAAGTTGTGG
AAGACTGTTGTGCAATGGAGTTGATGCTATTTTAACCATTAGTACTTGGT
TCCTAATTCCGATGGAGTTTCCAGATAATTTATATTACTAATGTGTCCGA
GGTACCTTGAGGTAGTGTGTTCATGTGTACAGTGAACTTCTGAGATTTGA
AACTGCAGCATCTAATACCGTGTGGGGGTTTGGGGTTTATTTCTTGACGA
TTCGCGGCAGAATTGTGGGTGCCATCATCTCGCGTTTCGAACAGCGTGGG
TATAAGCTAGCGGCTCTAAAGCTTAAACAGGCGGACGAGGCTCTCCTCAG
GCAGCACTACAAGTAAGTCATGATATGAGCGACATCGTTGCCAAACTTGT
CCGTGTTGAAAATAAAGTTTTTAATTAGTGGCCTTTAGAGTAGTCTTCAT
CCGTAAAATTAGAGTAGCAACACTTGGAATGTAGCCGCATGTACTTGACC
TCATGGTAATAACCCAGATTCGACTGGGACATGACTGAAACGTACGTGGT
GCTACGAGATATCCCGAACTTACTAGATTTGTGGTAGTAGCGGAATGATG
ACTACGCTAGCTTGTTACCATCTTATCTGTCTTGGACCCTCGTACAGTGC
TGTGCTCAACAAGGGGACTCGATGCCCGTCATTAAGCAAGTTATATATAT
ATATATATGTAATATGGAGTAATTGCTGTATTATTGTAGTCGAACACTGG
GTTGAGCCATGATTAATGAGACAACCAAGTAGTGTACTGGGTTGTCCCAT
TACTCCAGACGAGTATGTGGAAAATAACACGCGGAATAGTGTGAGTCGGC
GACACAGGCCGACTGACGGGAACACCATGTAAAGGGTTGGAAATCGAAAA
TAATGTTTTGCTGCTCGCGGGCGTACGTCTGTTTTTGCCCGCAGCCCAAC
TCGTCAAGCCACGGTCTTGTTTTGATGCCAATTTTGTTGAAGCCCTTCCA
TCACTCGGGCGAAAGCAACACATTGCACTAATCGTGTCTCGGGCGTACTT
GAATGTAAGGCGGGTATTAACTAGGATTCCACGGGGGGGCATCTAGTCTT
GAAAATTTGATTATTCATGTGAAATTTAATCCTTGTTCTGGAAAGTGATC
GGTGAGGAGATCCAAGGGTTCCCCTCGAAAGTTCGAATTGGGAACCAACC
ACGAAACCGAATCGTGACCTCCCTTGGAGAGGAATTGGCTCATCATATCT
CATGCTGATGGGATTAATCCCAAAAAAACATGAACGATGGATTTGCTACG
AATAAAGAAAAATGAAGTTAAAAGTTCGAATGTTGATCCTTCAAGTAGTG
GGCACCGATTCACATTCCACGCGCAAGTCAGGGCGATCGACTGGATGCTC
TCTGCACAACTGCCTCGTGCGGGTGTGCTCCAAGGAGGCTCCAGAAACAG
CCGGTGTCGTTCGCTCGTTACGTCCGTGGTACAAAAACCCCCCGGCTGAG
ATGCCTCAGGAGGCGTCCTCGTTCTGAGGCGCCTCCGCTAGTCTCGGCCA
TCCGGCTCGGCGAGAGTTGGCAGTGGCACCTCGTACTATCGATGTCACTC
AGCCATTGCCCTAGAGCTTTGAGCCAACATTTTGAATTTTCCAATATTGG
GCTGTTTGCACAGCAAGCGTCTGTTTGTAAAATTTGATCTGGTCTTGCAT
TATGGCTCGTACTGAGCTGTACCCAAATATGTTCGCATGCCTCAAAAAGC
TTTACCGTCGATTTACTCTTGACTGCTGTGTTTCCTCCAAGCCTTACCTA
CACAACTGGCTGTCATCTTCCAGAAGAATGAACATAAAGTACCTCGGAAA
AGACCCCAAAAAGGGGTGGTTTCTTGTTCGTCCGAGCTAGTAATCCTTCT
TGGAAATTCGGTAACCACAACGCTCTCCTGCCAGCATTTCCTGCTCACTC
TTCGTGGTATCCCTTTCTAGCGGCACCGGAAGTCACATTCAGTGGTAGGA
CTGGTCAATACTTGAGGGGCAGTCTAAAACCGAATGTCAAAACGGCCAAG
TCACGTACAACGGCTACCCCACATATTTCATCGGTTTATGAGTGTAGAAC
CGATGGAAGACCGACGTGATAGTATAACCCGCGTTCTGCGGGGATCTAAA
TCGGGACTTAGTACTTGCTACCTAGTCGTGGGTTTAAGCTCCTCCCCTCA
CAGCACTTACGATGTGTGTTAACGTTGGTTGCATACGCCGGGGTGGAAAG
GAAAGGACCTGGTCAAAGAAAAATAGAGCGGACCGGTACTCATGCGTACT
CTGATAATGTTTGAGTATTGATCCCTATAAGCCAATTCTACATATTTAAT
TACACATTCCGCCGTAACAGTTGAAGCTCCATGTCTTGGCGAGTTTTGCC
GGTGTACTTGAAATGGTCTACATGTTGGTAATTTCGTGTAATCGGTAACG
AAGCCATGATCTACCTTACAAGTTCACTATTTCTCTTGAATTCACAGTTT
ATCTTATTTTCCACGCATTCATGTTTCACAGGGATCTTGTAGACAAGCCG
TTCTTCCCTAAAATGATGGAGTACATGATCTCGGGGCCCGTGGTGTGCAT
GGCGTGGGAAGGGAAGGATGTGGTGCGTATGGGGCGCAAGATGTTGGGCG
CGACAAATCCTCTGGAGAGCGAGCCGGGAACGATTCGTGGGGACTTCGCG
TTGGAGGTAAGGGGCAGACGGCAGATGAAATCTATACTGCGCCAGCCTTG
TTGGTCATTTTCGGGAGAGCGTTGGTGGAATCATGAAGTTTTGGCGGTGA
CAGCGCAGTTGGACTGGGCAAACGGCATGACACCGTGGAGATACTCACGG
CTGCAAAACAACCGGACAGTTCTCCACGCAATACAGTTGTGATGAACCGT
ATCTGGGGCAACATAGAAAACAGGGAGAAAAGATTCGCAAACTGGCACCG
GCTTATCCCGAGAGTTCATGTGACGTGCTGTTTTGTGCCATGGTATCCAC
AGGCACAGCAACAGGCCGCCCGTCATTCTTGTGGCAGTTGGATTCTGAGG
ATACAAATGATGGCGTAGGTGGTGATCATGAGTAAATAATGCTAGAGTAA
GGCATATTTATGTCAGCTTTGTGTTCAAGGTTTCGAGGGCCTGGATAAAA
TGAAAATGGAGGGAGTCAAGTTGGACGTATTCGTGTTCCACTACAGGAGT
GCAGGATGTTTCAGGTCGGGTTTGGCCTCTTCATGGAAATTTACTACTAC
GTCGAGCACGCCAGCCATTTGGGCGGAATCTTTCAGGTCTCATCCATGGT
GGAGCCATGATTCTTGTTCGTTGTACTCGTACTGGGAGAATTTCACCAAT
TGTTCATTGCGGCGAGCAAATTGGAACAAGTACCGAAATTTACCGTTATT
CCGAT back to topCoding sequence (CDS) from alignment at H-paniculata_contig4839:3594..8548+ >mRNA_H-paniculata_contig4839.11952.1 ID=mRNA_H-paniculata_contig4839.11952.1|Name=mRNA_H-paniculata_contig4839.11952.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1368bp|location=Sequence derived from alignment at H-paniculata_contig4839:3594..8548+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGGTGAATGGCCTACTGTGTGCCTTCTTGGCGGCAGTTGCACCTGT
TGCCTTTGGGTTCATAGCCCCTGTTCACACCGGTTCCTTTGCCGCAATGG
CCAACGGCCACGTAGCGCATGCTCCCTTCACCACAGCAACAAGGGCTATG
AGGAAGGAGTCGCCGGTAATGTCCATGGAGAGGTCGTACATCATGGTCAA
ACCGGATGGCGTACAGCGTGGATGATGGTGAATGGCCTACTGTGTGCCTT
CTTGGCGGCAGTTGCACCTGTTGCCTTTGGGTTCATAGCCCCTGTTCACA
CCGGTTCCTTTGCCGCAATGGCCAACGGCCACGTAGCGCATGCTCCCTTC
ACCACAGCAACAAGGGCTATGAGGAAGGAGTCGCCGGTAATGTCCATGGA
GAGGTCGTACATCATGGTCAAACCGGATGGCGTACAGCGTGGAATTGTGG
GTGCCATCATCTCGCGTTTCGAACAGCGTGGGTATAAGCTAGCGGCTCTA
AAGCTTAAACAGGCGGACGAGGCTCTCCTCAGGCAGCACTACAAAATTGT
GGGTGCCATCATCTCGCGTTTCGAACAGCGTGGGTATAAGCTAGCGGCTC
TAAAGCTTAAACAGGCGGACGAGGCTCTCCTCAGGCAGCACTACAAGGAT
CTTGTAGACAAGCCGTTCTTCCCTAAAATGATGGAGTACATGATCTCGGG
GCCCGTGGTGTGCATGGCGTGGGAAGGGAAGGATGTGGTGCGTATGGGGC
GCAAGATGTTGGGCGCGACAAATCCTCTGGAGAGCGAGCCGGGAACGATT
CGTGGGGACTTCGCGTTGGAGGTAAGGGGCAGACGGCAGATGAAATCTAT
ACTGCGCCAGCCTTGTTGGTCATTTTCGGGAGAGCGTTGGTGGAATCATG
AAGTTTTGGCGGTGACAGCGCAGTTGGACTGGGCAAACGGCATGACACCG
TGGAGATACTCACGGCTGCAAAACAACCGGACAGTTCTCCACGCAATACA
GTTGTGAGGATCTTGTAGACAAGCCGTTCTTCCCTAAAATGATGGAGTAC
ATGATCTCGGGGCCCGTGGTGTGCATGGCGTGGGAAGGGAAGGATGTGGT
GCGTATGGGGCGCAAGATGTTGGGCGCGACAAATCCTCTGGAGAGCGAGC
CGGGAACGATTCGTGGGGACTTCGCGTTGGAGGTAAGGGGCAGACGGCAG
ATGAAATCTATACTGCGCCAGCCTTGTTGGTCATTTTCGGGAGAGCGTTG
GTGGAATCATGAAGTTTTGGCGGTGACAGCGCAGTTGGACTGGGCAAACG
GCATGACACCGTGGAGATACTCACGGCTGCAAAACAACCGGACAGTTCTC
CACGCAATACAGTTGTGA back to top
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