prot_H-paniculata_contig48256.11923.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig48256.11923.1 vs. uniprot
Match: A0A6H5JTV6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV6_9PHAE) HSP 1 Score: 219 bits (558), Expect = 3.770e-62 Identity = 119/247 (48.18%), Postives = 160/247 (64.78%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGDEDLSDK----------PVRSAVGSLIWLSGMTRPDIASAVLAVARQAHNPTDRHWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYPDKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQEAKAALFTRAVL 236
+YGLKQ+GR W + LV N G Q K+DPCVFR + VV MI+ ++VDD++VAG C+ L A+L +F T GE +W+ GCA RD+ G +S P R A+GS++W+S +RPD++ AV AVAR AH P RHW A+ KI+ YLK T+DLG+ ++RG L L+VYVDA Y D + RRSV+G+A +GG+VVS S TQ V+LS++EAEY+A + K ALF RAVL
Sbjct: 685 IYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECEWFDGCAIERDVEAGTLRISQTAYIDSMGEEWPAREAIGSMVWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVAGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVL 929
BLAST of mRNA_H-paniculata_contig48256.11923.1 vs. uniprot
Match: A0A6H5JZ67_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ67_9PHAE) HSP 1 Score: 183 bits (464), Expect = 9.670e-51 Identity = 108/235 (45.96%), Postives = 149/235 (63.40%), Query Frame = 0
Query: 3 GLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGDEDLSDKPVRSAVGSLIWLSGMTRPDIASAVLAVARQAHNPTDRHWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYPDKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQEAKAALFTRAVL 236
GLKQ+GR W + LV N G Q K+DPCVFR + VV MI+ V++DD++VAG C L A+L +F T GE + + GCA RD+ E + K ++A+ W+S +RPD++ AV AV R AH RHW A+ K++SYLK T+DLG+ ++R L ++VYV+A Y D + RSVSG+A +GG+VVS S TQ V+LS++EAEY+A + K ALF RAVL
Sbjct: 274 GLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVVYLDDILVAGSDEDCKGLLASLNKKFPTKNLGECERFDGCAIERDV----ESTTLKISQTAI---TWVSTCSRPDVSFAVRAVERHAHALAKRHWDAIRKVLSYLKETRDLGITYQRRSGLGMAVYVNASYVDTED-NRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAGGEGVKEALFVRAVL 499
BLAST of mRNA_H-paniculata_contig48256.11923.1 vs. uniprot
Match: A0A6H5KFN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN5_9PHAE) HSP 1 Score: 181 bits (458), Expect = 1.310e-50 Identity = 100/221 (45.25%), Postives = 140/221 (63.35%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTRGELKWYLGCAFWRDIVRGDEDLSDKPVRSAVGSLIWLSGMTRPDIASAVLAVARQAHNPTDRHWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYPDKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVA 221
+YGLKQ+GR W + LV N G Q K+DPCVFR + VV MI+ ++VDD++VAG C+ + + + G R DE+ + PVR A+GS++W+S +RPD++ AV AVAR AH P R+W A+ KI+ YLK T+DLG+ ++RG L L+VYVDA Y D + RRSVSG+A +GG+V+S S TQ V+LS++EAEY+A
Sbjct: 185 IYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEECQCMVERFDVKSTSRIPATPGADLGPK--REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRNWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVLSHGSKTQSIVSLSSTEAEYIA 401
BLAST of mRNA_H-paniculata_contig48256.11923.1 vs. uniprot
Match: A0A6H5KLY3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLY3_9PHAE) HSP 1 Score: 177 bits (449), Expect = 1.390e-50 Identity = 106/238 (44.54%), Postives = 146/238 (61.34%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTRGELKWYLGCAFWRDI--VRGDEDLSDKPVRSAVGSLIWLSGMTRPDIASAVLAVARQAHNPTDRHWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYPDKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQEAKAALFTRAVL 236
+YGLKQ+GR W + LV N G Q K+DPCVFR + VV MI+ ++VDD++VAG R + Q+T ++ D+ R +E + PVR A+GS++W+S +RPD++ AV AV R AH P RHW A+ KI+ YL T+ LG+ ++RG L L+VYVDA Y D + RRSVSG+A +GG+VVS S Q V+L ++EAEY+A + K ALF RAVL
Sbjct: 52 IYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGM---------VRRFDVQSTS-----HIPATPGADLGPKRDNEKGGEWPVREAIGSMVWVSTFSRPDVSFAVPAVVRHAHAPAKRHWDAIQKILGYLTGTRYLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKMQTIVSLYSTEAEYIAAGEGVKEALFVRAVL 273
BLAST of mRNA_H-paniculata_contig48256.11923.1 vs. uniprot
Match: A0A6H5KTI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI8_9PHAE) HSP 1 Score: 167 bits (423), Expect = 5.280e-48 Identity = 99/211 (46.92%), Postives = 137/211 (64.93%), Query Frame = 0
Query: 39 KNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQT---------TRGELKWY--LGCAFWRDI--VRGDEDLSDKPVRSAVGSLIWLSGMTRPDIASAVLAVARQAHNPTDRHWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYPDKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQEAKAALFTRAVL 236
K+ VV MI+ ++VDD++VAG C L ++ F T R +++ + + DI R DE + PVR A+GS++W+S +RPDI+ AV AVAR AH P +RHWKA+VKI++YLK T+DLG+ +ERG L L+VYVDA Y D + RRSVSG+A +GG+V+S S TQ V+LS++EAEY+A + K ALF RAVL
Sbjct: 2 KDDVVVMIIVIYVDDILVAGSDDDCKELLDSINKAFPTKDLGECVIVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADAED-RRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVL 211
BLAST of mRNA_H-paniculata_contig48256.11923.1 vs. uniprot
Match: A0A6H5K1X1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1X1_9PHAE) HSP 1 Score: 171 bits (434), Expect = 1.600e-47 Identity = 108/243 (44.44%), Postives = 139/243 (57.20%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRG----------------DEDLSDKPVRSAVGSLI-WLSGMTRPDIASAVLAVARQAHNPTDRHWKAVVKIISYLKRTKDLGLVFERG--RDLNLSVYVDAD---YPDKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYV 220
+YGLKQA R W L L+ +G+ Q +D CVFRL + G V MI+ VHVDD+ AG+ +CD L GEL+WY C + RD+ RG +E +D P R VGSL+ WL+ TRPDIA+AV AVAR +P HW A + I+ Y++RT +G+ FERG +++ V+VDAD Y RRSVSG VM GG V+ S TQ CVTLST+EAEYV
Sbjct: 75 LYGLKQASRHWHAHLTRCLLL-LGLLQCLADACVFRLMEEGNVVMIIVVHVDDIFAAGQKERCDKFGRDLNEMVPVKNLGELRWYSACFYERDVERGLLKISQQSVKLSDFDVNEASADVPFRELVGSLMMWLATQTRPDIANAVRAVARYCASPKMVHWTAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADNAVYCSVVPXRRSVSGGLVMCGGGSVTWFSRTQKCVTLSTTEAEYV 316
BLAST of mRNA_H-paniculata_contig48256.11923.1 vs. uniprot
Match: A0A6H5KQ05_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ05_9PHAE) HSP 1 Score: 172 bits (435), Expect = 4.030e-47 Identity = 104/253 (41.11%), Postives = 146/253 (57.71%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIV----------------RGDEDLSDKPVRSAVGSLIWLSGMTRPDIASAVLAVARQAHNPTDRHWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYPDKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQEAKAALFTRAVL 236
+YGLKQ+GR W LV + Q K+DPCVFR + VV MI+ +++DD++VAG C+ L A+L T GE +W+ G D+ +GDE PVR A+GS++W+S +RPD++ AV R W A+ KI+ Y K T+DLG+ ++RG L L+VYVDA Y D + RRSVSG+A +GG+V+S S TQ V++S++EAEY+A + K ALF RAVL
Sbjct: 176 IYGLKQSGRQWGYHAAGTLVES-RFEQCKADPCVFRKMVDEVVVMIIVIYLDDILVAGSDEDCEELLASLNKTNPTNSLGECEWFDGMVRRFDVQSTSRIPASPGADLGPKQGDEKGGQWPVREAIGSMMWVSTFSRPDVSFAV------------RAWDAIQKIVGYSKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVISHGSNTQSIVSVSSTEAEYIAAGEGVKEALFVRAVL 414
BLAST of mRNA_H-paniculata_contig48256.11923.1 vs. uniprot
Match: A0A6H5KGA6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGA6_9PHAE) HSP 1 Score: 165 bits (418), Expect = 1.030e-45 Identity = 108/277 (38.99%), Postives = 144/277 (51.99%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRG--------------------------------------DEDLSDKPVRSAVGSLIWLSGMTRPDIASAVLAVARQAHNPTDRHWKAVVKIISYLKRTKDLGLVFERGR--DLNLSVYVDADYPDKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQEAKAALFTRAVL 236
+YGL+QA R++ KRLV L +G QS SDPCV R V ++ +HVDD++ G + AL T GE++++LGCAF RD G DE D P R VGSL+W++ TRPDI++AV AVAR +H P H KA KI++YL L L +++ D+ VYVDAD+ K+ RRSVSG V++ +V+ S TQ CVTLST+EAEYVAM K ALF + +L
Sbjct: 12 LYGLRQASRIFHKRLVSDL-KRIGFEQSLSDPCVLRFMMGDEVLGMIAIHVDDILYEGIERLAKMVVEALGDSLPTKNLGEIRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASLTNDYKSVMEDEGARDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHGKAAQKILNYLLEAAHLTLKYKQDTMVDVGTLVYVDADFASKATDRRSVSGALVLVADCLVAWISRTQKCVTLSTTEAEYVAMGDGVKEALFVKGML 287
BLAST of mRNA_H-paniculata_contig48256.11923.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE) HSP 1 Score: 172 bits (436), Expect = 1.460e-45 Identity = 110/274 (40.15%), Postives = 144/274 (52.55%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGDEDLS--------------------------------------DKPVRSAVGSLIWLSGMTRPDIASAVLAVARQAHNPTDRHWKAVVKIISYLKRTKDLGLVFERGR--DLNLSVYVDADYPDKSNWRRSVSGVAVMLGGSVVSATSTTQHCVTLSTSEAEYVAMAQEAKAALFTR 233
+YGLKQA R W K LV + +G Q +D CV RL + GVV M++ VHVDD+ GK +C+ L T GEL+ Y G F RD +G LS ++P RS VG L+WL+ TRPDI +AV AVAR ++ P HWKA + ++ Y++ T+ G+ +RG ++L VYVD+DY K+ RRSVSG VM GS VS S TQ VTLS++EAEY AMA K A+F R
Sbjct: 751 LYGLKQASRTWHKHLVRGM-KCLGFEQCAADACVMRLIEEGVVAMVVVVHVDDIFSIGKKSRCEQFGRDLNEYVPITNLGELRLYAGIRFSRDFAQGTITLSQQTYATNMVAKFGVTRNKETPMAVGVKLEEFDACEPDVEEPFRSLVGHLMWLANQTRPDILNAVRAVARYSYAPKSVHWKAALHMVMYIRCTRAYGITLQRGTAGGVSLEVYVDSDYASKATDRRSVSGGVVMCAGSCVSFFSRTQKSVTLSSTEAEYAAMADGMKEAIFLR 1023
BLAST of mRNA_H-paniculata_contig48256.11923.1 vs. uniprot
Match: A0A6H5K5V9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5V9_9PHAE) HSP 1 Score: 165 bits (418), Expect = 1.900e-45 Identity = 102/248 (41.13%), Postives = 139/248 (56.05%), Query Frame = 0
Query: 1 MYGLKQAGRMWSKRLVEVLVNNVGMTQSKSDPCVF-RLEKNGVVDMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGDEDLSDKPVRSAVGSLIWLSGMTRPDIASAVLAVARQAHNPTDRHWKAVVKIISYLKRTKDLGLVFERGRDLNLSVYVDADYPDKSNWRRSVSGVAVMLG----------GSVVSATSTTQHCVTLSTSEAEYVAMAQEAKAALFTRAVL 236
+YGLKQ+GR W + V N G Q K+DP VF + VV +I+ ++VDD++V G C+ L A+L +F T GE W R DE+ R A+GS++W+S +RPD++ AV AVAR AH P RHW A+ KI+ YLK T+DLG+ ++RG L L+VYVDA Y D + R + G G+V S S TQ V+LS++EAEY+A + ALF RAVL
Sbjct: 52 IYGLKQSGRQWGYHAADTPVEN-GFEQCKADPFVFPNMVDEVVVMIIIVIYVDDILVVGSDEDCEELLASLNKKFPTKNLGE---------WPK--REDEERXXXXXREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTEDRRSATVGXXXXXXXXXXXXXXXXGTVASHGSKTQSIVSLSSTEAEYIAAGEGVNEALFVRAVL 287 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig48256.11923.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig48256.11923.1 ID=prot_H-paniculata_contig48256.11923.1|Name=mRNA_H-paniculata_contig48256.11923.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=236bpback to top |