mRNA_H-paniculata_contig4799.11876.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4799.11876.1
Unique NamemRNA_H-paniculata_contig4799.11876.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig4799.11876.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 6.710e-52
Identity = 98/189 (51.85%), Postives = 122/189 (64.55%), Query Frame = 2
Query: 1457 DVTHIKWDCCPCSFGRSYTGKEGFATISYQATVDHSGCVLAVTKGFPGATNDKSIIRTTWRCRWFYEDLHV*GPNVQALQRERYMDRAQGGVYLLVDNGYHGWAMFMPPSKRTLCGEETRWGKTLGSVRKDMGYFFGVLKGRFRILKLPILYREKEDIDNIFFVCCILHNMLDAHDGLDVLEEDVNWTG 2023
            DVTHI W  CP +  RSYTGKEG+ T++YQ TVDH+  VLAVT GF G+TNDKSIIR         ED           + +    + +G  YLLVDNGYH W   +PPSK  +   +  + K L SVRKD+  FFG++KGRFRILKL I Y ++EDIDN+FF CCILHNML ++D    +EE+ NW G
Sbjct:  234 DVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKG-CYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAG 421          
BLAST of mRNA_H-paniculata_contig4799.11876.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 3.290e-51
Identity = 106/243 (43.62%), Postives = 140/243 (57.61%), Query Frame = 2
Query: 1310 SASSISQVLQ---EHFGRAV--R*AYLPADGAGSREGYA*VWPLGAHRGRRLVIDVTHIKWDCCPCSFGRSYTGKEGFATISYQATVDHSGCVLAVTKGFPGATNDKSIIRTTWRCRWFYEDLHV*GPNVQALQRERYMDRAQGGVYLLVDNGYHGWAMFMPPSKRTLCGEETRWGKTLGSVRKDMGYFFGVLKGRFRILKLPILYREKEDIDNIFFVCCILHNMLDAHDGLDVLEEDVNWTG 2023
            S  ++ +V     EHF   +     +LP++  G  +     +      G     DVTHI W  CP + GRSYTGKEG  T+ YQ TV+H+G VLAVT+GF G+TNDK+II           D           +++   +  +G  YL+VDNGYH W M + PSK  L   +  + K L SVRKD+  FFG+LK RFRILKL + Y+++E +D +FF CCILHNML  HDG+  LEEDVNW G
Sbjct:  151 STPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKG-CYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVG 392          
BLAST of mRNA_H-paniculata_contig4799.11876.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 1.290e-49
Identity = 94/216 (43.52%), Postives = 124/216 (57.41%), Query Frame = 2
Query: 1370 YLPADGAGSREGYA*VWPLGAHRGRRLVIDVTHIKWDCCPCSFGRSYTGKEGFATISYQATVDHSGCVLAVTKGFPGATNDKSIIRTTWRCRWFYEDLHV*GPNVQALQRERYMDRAQGGVYLLVDNGYHGWAMFMPPSKRTLCGEETRWGKTLGSVRKDMGYFFGVLKGRFRILKLPILYREKEDIDNIFFVCCILHNMLDAHDGLDVLEEDVNW 2017
            +LP + +G  +     +      G    +DVTHI W  CP +  RSYTGKEGF TI YQ TVDH+G  +AVT+GF G+TNDK+ +           D            ++      +G  Y+LVDNGYH W + + PSK  L   +  + K L SVRKD+  FFG+LKGR RIL L + ++ +E IDN+FF CCILHNML   DG+D L E+ NW
Sbjct:    7 HLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKG-CYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNW 221          
BLAST of mRNA_H-paniculata_contig4799.11876.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 1.700e-49
Identity = 93/185 (50.27%), Postives = 119/185 (64.32%), Query Frame = 2
Query: 1484 CPCSFGRSYTGKEGFATISYQATVDHSGCVLAVTKGFPGATNDKSIIR-----TTWRCRWFYEDLHV*GPNVQALQRERYMDRAQGGVYLLVDNGYHGWAMFMPPSKRTLCGEETRWGKTLGSVRKDMGYFFGVLKGRFRILKLPILYREKEDIDNIFFVCCILHNMLDAHDGLDVLEEDVNWTG 2023
            CP + GRS+TGKEGF TI+Y+ TVDH G  LAVT GF GATNDK+IIR        R    Y +          L++    +R + G +L++DN YH W   + PSK     ++T + + L SVRKD+  FFG+LKGRFRILKL + Y ++E IDNIFF CCILHNML   DGLDV +E+ +WTG
Sbjct:    2 CPFTLGRSFTGKEGFPTIAYEVTVDHVGRALAVTNGFTGATNDKTIIRYDSGVNNIRTESQYTEREY------KLRKVNGTERTRRGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTG 180          
BLAST of mRNA_H-paniculata_contig4799.11876.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 1.820e-48
Identity = 91/180 (50.56%), Postives = 115/180 (63.89%), Query Frame = 2
Query: 1484 CPCSFGRSYTGKEGFATISYQATVDHSGCVLAVTKGFPGATNDKSIIRTTWRCRWFYEDLHV*GPNVQALQRERYMDRAQGGVYLLVDNGYHGWAMFMPPSKRTLCGEETRWGKTLGSVRKDMGYFFGVLKGRFRILKLPILYREKEDIDNIFFVCCILHNMLDAHDGLDVLEEDVNWTG 2023
            CP +  RSYTGKEG+ T++YQ TVDH+  VLAVT GF G+TNDKSIIR         ED           + +    + +G  YLLVDNGYH W   +PPSK  +   +  + K L SVRKD+  FFG++KG FRILKL I Y ++EDIDN+FF CCILHNML ++D    +EE+ NW G
Sbjct:    2 CPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKG-CYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAG 180          
BLAST of mRNA_H-paniculata_contig4799.11876.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 1.940e-48
Identity = 97/195 (49.74%), Postives = 121/195 (62.05%), Query Frame = 2
Query: 1457 DVTHIKWDCCPCSFGRSYTGKEGFATISYQATVDHSGCVLAVTKGFPGATNDKSIIRTTWRCRWFYEDLHV*GPNVQALQRERYMDRAQG------GVYLLVDNGYHGWAMFMPPSKRTLCGEETRWGKTLGSVRKDMGYFFGVLKGRFRILKLPILYREKEDIDNIFFVCCILHNMLDAHDGLDVLEEDVNWTG 2023
            DVTHI W+ CP + GRS+TGKEGF TI+Y  TVDH G  LAVT GF GATNDK+IIR       +   ++      Q  +RE  + +A G      G +L+VDNGYH W   + PSK     E+T + + L SVRKD+G F        RILKL + Y ++E +DNIFF CCILHNML   DGLDV EE+ +WTG
Sbjct:  112 DVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIR-------YDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTG 291          
BLAST of mRNA_H-paniculata_contig4799.11876.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 1.040e-47
Identity = 105/268 (39.18%), Postives = 138/268 (51.49%), Query Frame = 2
Query: 1310 SASSISQVLQE---HFGRAV--R*AYLPADGAGSREGYA*VWPLGAHRGRRLVIDVTHIKWDCCPCSFGRSYTGKEGFATISYQATVDHSGCVLAVTKGFPGATNDKSIIRTTWRCRWFYEDLHV*GPNVQA---------------------------LQRERYMDRAQGGVYLLVDNGYHGWAMFMPPSKRTLCGEETRWGKTLGSVRKDMGYFFGVLKGRFRILKLPILYREKEDIDNIFFVCCILHNMLDAHDGLDVLEEDVNW 2017
            SA ++  +  +   HF R +     +LP + +G  +     +      G    +DVTHI W  CP +  RSYTGKEGF TI+YQ TVDH+G  +AVT+GF G+TNDK+I+         + D H                                   +  E        G YLLVDNGYH W + + PSK  L   +  + K L SVRKD+  FFG+LKGRFRILKL + Y+ +E IDN+FF C ILHNML   DG+D L E+ NW
Sbjct:  109 SAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNW 376          
BLAST of mRNA_H-paniculata_contig4799.11876.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 7.660e-47
Identity = 100/250 (40.00%), Postives = 134/250 (53.60%), Query Frame = 2
Query: 1310 SASSISQVLQE---HFGRAV--R*AYLPADGAGSREGYA*VWPLGAHRGRRLVIDVTHIKWDCCPCSFGRSYTGKEGFATISYQATVDHSGCVLAVTKGFPGATNDKSIIRTTWRCRWFYEDLHV*GPNVQA---LQRERYMDRAQGGVYLLVDNGYHGWAMFMPPSKRTLCGEETRWGKTLGSVRKDMGYFFGVLKGRFRILKLPILYREKEDIDNIFFVCCILHNMLDAHDGLDVLEEDVNWTGGRSA 2035
            SA ++  +  +   HF R +     YLP++  G  +     +      G    +DVTHI W  CP +  RSYTGKEG  T+ YQ TV+H+G  +AVT+GF  +TNDK+ +   W      E +       +    +  E        G YLLVDNGYH W + M P+K  L   +  + K L SVRKD+  FFG+LKG FRI K+ + Y E+E IDN+FF CCILHNML   DG+D L E+  W     A
Sbjct:  122 SAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTV--CWDA--VVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAGA 367          
BLAST of mRNA_H-paniculata_contig4799.11876.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 8.210e-47
Identity = 95/194 (48.97%), Postives = 122/194 (62.89%), Query Frame = 2
Query: 1457 DVTHIKWDCCPCSFGRSYTGKEGFATISYQATVDHSGCVLAVTKGFPGATNDKSIIR-----TTWRCRWFYEDLHV*GPNVQALQRERYMDRAQGGVYLLVDNGYHGWAMFMPPSKRTLCGEETRWGKTLGSVRKDMGYFFGVLKGRFRILKLPILYREKEDIDNIFFVCCILHNMLDAHDGLDVLEEDVNWTG 2023
            DVTHI W  CP +  R YTGKEG  T+++Q TVDHSG VLAVT+GF GATNDK+IIR     T  R    Y +       + A   +++ ++   G YLLVDNGYH W   +PPSK  +   +  + K L S RKD+  +FG+LKGRFRI KL I + ++E IDN+FF CCILHNML + D    + E+ NW G
Sbjct:  159 DVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKY---KLYAQDGQQFEEK---GCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAG 346          
BLAST of mRNA_H-paniculata_contig4799.11876.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 5.860e-46
Identity = 95/194 (48.97%), Postives = 122/194 (62.89%), Query Frame = 2
Query: 1457 DVTHIKWDCCPCSFGRSYTGKEGFATISYQATVDHSGCVLAVTKGFPGATNDKSIIR-----TTWRCRWFYEDLHV*GPNVQALQRERYMDRAQGGVYLLVDNGYHGWAMFMPPSKRTLCGEETRWGKTLGSVRKDMGYFFGVLKGRFRILKLPILYREKEDIDNIFFVCCILHNMLDAHDGLDVLEEDVNWTG 2023
            DVTHI W  CP +  R YTGKEG  T+++Q TVDHSG VLAVT+GF GATNDK+IIR     T  R    Y +       + A   +++ ++   G YLLVDNGYH W   +PPSK  +   +  + K L S RKD+  +FG+LKGRFRI KL I + ++E IDN+FF CCILHNML + D    + E+ NW G
Sbjct:  250 DVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKY---KLYAQDGQQFEEK---GCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAG 437          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4799.11876.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAU4_9PHAE6.710e-5251.85Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE3.290e-5143.62Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7FSK2_ECTSI1.290e-4943.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JQM6_9PHAE1.700e-4950.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTC6_9PHAE1.820e-4850.56DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K796_9PHAE1.940e-4849.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE1.040e-4739.18DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JHI0_9PHAE7.660e-4740.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE8.210e-4748.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE5.860e-4648.97Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4799contigH-paniculata_contig4799:10055..13727 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size2648
Cds size576
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4799.11876.1prot_H-paniculata_contig4799.11876.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4799 11672..12831 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930422.1290715-UTR-H-paniculata_contig4799:10054..109401622930422.1290715-UTR-H-paniculata_contig4799:10054..10940Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4799 10055..10940 -
1691481284.9060874-UTR-H-paniculata_contig4799:10054..109401691481284.9060874-UTR-H-paniculata_contig4799:10054..10940Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4799 10055..10940 -
1622930422.1468143-UTR-H-paniculata_contig4799:11367..116711622930422.1468143-UTR-H-paniculata_contig4799:11367..11671Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4799 11368..11671 -
1691481284.9156747-UTR-H-paniculata_contig4799:11367..116711691481284.9156747-UTR-H-paniculata_contig4799:11367..11671Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4799 11368..11671 -
1622930422.1939542-UTR-H-paniculata_contig4799:12831..134541622930422.1939542-UTR-H-paniculata_contig4799:12831..13454Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4799 12832..13454 -
1691481284.9533386-UTR-H-paniculata_contig4799:12831..134541691481284.9533386-UTR-H-paniculata_contig4799:12831..13454Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4799 12832..13454 -
1622930422.2063708-UTR-H-paniculata_contig4799:13468..137271622930422.2063708-UTR-H-paniculata_contig4799:13468..13727Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4799 13469..13727 -
1691481284.9659593-UTR-H-paniculata_contig4799:13468..137271691481284.9659593-UTR-H-paniculata_contig4799:13468..13727Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4799 13469..13727 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930422.1642857-CDS-H-paniculata_contig4799:11671..118991622930422.1642857-CDS-H-paniculata_contig4799:11671..11899Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4799 11672..11899 -
1691481284.9273794-CDS-H-paniculata_contig4799:11671..118991691481284.9273794-CDS-H-paniculata_contig4799:11671..11899Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4799 11672..11899 -
1622930422.1772916-CDS-H-paniculata_contig4799:12483..128311622930422.1772916-CDS-H-paniculata_contig4799:12483..12831Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4799 12484..12831 -
1691481284.936931-CDS-H-paniculata_contig4799:12483..128311691481284.936931-CDS-H-paniculata_contig4799:12483..12831Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4799 12484..12831 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4799.11876.1

>prot_H-paniculata_contig4799.11876.1 ID=prot_H-paniculata_contig4799.11876.1|Name=mRNA_H-paniculata_contig4799.11876.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=192bp
MEEEDRRIQLLGARALSDAAIAAVEKAEREDRDEPCVKRTRCVYPGKDYG
ASAWATMLRCDSLADPFSSEARRFRRRFRVPHMFFLGLVSLAEEKRWFHS
AACDVAGRAGIPVELKVLAVLQVLSRGTVLMTFLRCPSWASRQRKQHFTS
SARTFRQSCSMSISSCRRGRLSRRLCMSMAAWGSPGPSACN*
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mRNA from alignment at H-paniculata_contig4799:10055..13727-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4799.11876.1 ID=mRNA_H-paniculata_contig4799.11876.1|Name=mRNA_H-paniculata_contig4799.11876.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3673bp|location=Sequence derived from alignment at H-paniculata_contig4799:10055..13727- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCGTAGAAATATTTTTGTACATGCTTTGTATGATTGCACACACAGTGGGG GCGGGTACCATTCTACTCGCTTGTCATTATTGGGATTGACGGCGGGGATT CTGTAGCGATATCCTGCGCGTTCCAAAGTTTGAAGGAAATGTTTTTACTC TGTAGTTACTCTGTAGCGTGAGCAAATTTGAGGTACCTTATAAACTGTAA CAGCCTATACCTTATATATAATACCTTGTAGCGAGGTACCTTATGTCGGG CCATCCATCGTATGTCATACGAGCGAACCGAACCGATGGAGAAGGAGGAA GTGACCTACTGGCTCTTGAGGCCGTTTATTATGGGCGTCTGAAACTTGAT TTTTGTGTTTCTCTGCTTCTTGGTTTACCAGCTATACTACACCTGAATCT TTTTGCCAAGAAGAAGTTTCGAAGGCAAGACTTGACTGCCCACAGAAAAT GGCACCACGTCATGAGTAGCGGTGTCAGGCCATCTCTTATAGGGTCGAAA AAACACACTCGAAAACGTAAATTTGAATTTTTCGTTTGAGAGGTTTTCGA TTCCTCGTCTTTTAGGGTCGAGAAGCTCGAAAAGTGGTTTGGATAAAATC GTTTGGGAGGGCCGACAGCTCCCAGCTACAAAAATCTGGCAATTTTTCGA TAACCCTCGCATTTCATCAACAGAAGTGATTTTCTGGGAATTCAATGAGA TACGCAGGTGTTACTCTGCTTTCCTCTCAGATTGTCGATCTTTCATAGCA CAGAGTGGCATACCCACGCTGGTCGCAGATGGCATGAGCACATACACAAT CCAATGTGTGAGTCCGGCCGCCCTATGGTAAGTCTGGAGGAATAGCCAAC GTTTATTACGTCCGTGCTTGGTGCTGTAGTGGCGGCTGTCGAATACATGG AAGAAGAGGACAGGCGCATTCAATTGCTGGGTGCAAGGGCGCTTTCTGAT GCCGCCATTGCGGCGGTTGAGAAGGCTGAGCGCGAAGACCGTGATGAGCC TTGTGTAAAGCGCACGCGATGCGTATACCCCGGAAAAGACTACGGAGCGT CGGCGTGGGCAACCATGCTCCGCTGTGATTCTCTTGCCGATCCTTTCTCC AGCGAGGCTAGGCGGTTTAGGCGCCGATTTCGTGTCCCTCACATGTTCTT TCTCGGCCTGGTGAGCCTAGCAGAGGAGAAGAGGTGGTTCCACTCTGCAG CCTGCGACGTCGCAGGACGTGCAGGGATCCCAGTGGAGCTCAAGGTAGGT CCATGCGGTTAGGGCAGACAACTGTACAATGCTAATCGGGGTACTGGTTT CGTGATGCTATTATCGCTGTAGTGTTAGGGTTTACGTCAGTGCGGAGCAT TGCACTCGTACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTGCA CTGTACTGCACTGCACTTTGTTGATGTCCGATGACCTGTGCGTTGTTGTG CAACTACATAACTTCCCTACACAACATCGCTGAGAGTGTACTCTGCTTTG ATCTGCGCTATGAAAAAGCTCTGCACACAATTCAGGTCGTATGCTGCGAC TACTCCTTGAACTGTAGACAGCCTGTGACTTTGGCGACGATGGGTAGGAT GTACCGTAAAAAAGATGTGATGCTACTCTTGCACAGCGGTGTACCACCTT GCGAAGGGACACGACAGAATTCGGCAAGTGTAGGAGGGAAGTCAGGGTGC ATGGCGTGTTTACTTACATGCCATTCACAATCAAGGTGGAACCATCTCTC ATGAAAGGTCATTCGACCCCACGTGCTCATCGAAGCGAGACCCCACATGT TGTGCGCGTGCCCCTCCCACATTGCCAGGTGCTCGCTGTTCTTCAGGTAC TGAGTAGGGGAACCGTTTTGATGACATTTCTCAGATGTCCCTCATGGGCG AGTCGACAGCGCAAGCAGCATTTCACAAGTTCTGCAAGAACATTTCGGCA GAGCTGTTCGATGAGCATATCTTCCTGCCGACGGGGCAGGCTCTCGAGAA GGTTATGCATGAGTATGGCCGCTTGGGGCTCACCGGGGCCGTCGGCTTGT AATTGATGTTACCCACATCAAATGGGACTGCTGCCCGTGCTCCTTTGGAC GTTCTTACACGGGCAAGGAGGGATTCGCAACCATTTCATACCAAGCGACG GTCGATCATAGCGGCTGCGTCCTTGCCGTCACGAAGGGCTTTCCTGGGGC TACCAACGACAAGTCAATCATCCGTACAACCTGGCGGTGCAGATGGTTTT ATGAGGATTTACATGTATAGGGACCGAACGTTCAGGCTCTACAACGAGAA CGGTACATGGACCGAGCACAAGGGGGTGTCTATCTGCTTGTGGACAATGG GTATCATGGGGTGAGTGTGATACGAGTAAAGTAACGTTACATTTTGGCCC GAAGTGTACGTGGGGGCTGTTGACACGGCCCCAGAAGCACAATGTTTCGC CAATGCCATCAATAAAGGCCGCGGTTTAATGCAGCTCAAACGCGTACGCG CACAAGACGTGAGAAGCATGTTACATATCGCTGTCATCACTAGGTTGCGA ACTGATTTACCACGTCGTTTTAAACTAGTGGGACTGATAACCTTCAAATC ACACCCGTATAAAAGGAACTCTAACATAACATTACATATTTTTTCCCTAT AACCTGGTAGCATTGCTGTTTACCCATCGAAAGGGACGATACCCGCCCCC GCGTGAGAAGCCAACCTATCTCAATGCCCGCTCCGTGCAAACTCAACCCT ACGTCGCCCACTCCACTACGTTTTCATATGCATACAGTGGGCTATGTTCA TGCCCCCGTCGAAGCGCACCTTATGTGGCGAGGAGACACGCTGGGGCAAG ACGCTAGGGAGCGTACGAAAGGATATGGGGTACTTCTTTGGCGTCCTGAA GGGCCGCTTTAGAATCCTCAAACTCCCCATCCTCTACCGCGAAAAAGAGG ACATCGACAACATCTTTTTCGTATGCTGCATCCTCCACAACATGCTGGAC GCTCACGACGGATTGGACGTACTGGAGGAAGATGTGAACTGGACGGGTGG ACGGTCTGCACGACCCCGAAGTCGCTGATCCCGAGACGGACCACAGTCGG GTCGGGATCAGGCACAGCTTCGGCGGCAGTGAGGTGCAAGAAGTGGAATC GGACCACTACGTGCTGAAGAAAAAGTTGATCGTACATTTCTCATACCTCA GGCACATGAATGACACCACATGGCTTACTAGGTAGGCGCTGTGGTCATAG CCGTGCAGAATACGGTCCACACGCCTGGTTGCATAATCGATAGTACAGGA GAAGTGGTTGCTTTGGTTTGCCGTATATCTTCCAGCGACTAGTGTCGTTG CTTCCGCAGGCTGGACAGGATAGGCAATAAAGGCTTTTAATTTACACACT ACATTGTCACGCGCAGCTGCGTTTACGAGTTCAGTGTTAATAGTTTTACA CCGACTACCGAGTGTGTTTACGGAGCTGTTGAGCAGACGTATTTTTTATT TTGTTTTGCAACAGGTGAGGGCCAAAACGTGAAAGAGGTTTACCTGCTTA CAGTCATAAGGCCACTTCATATTAGACCTGGATATCATTCAAAATTGGAT ACTTCCAAAAAATCTTATGACCACTTCTCATGGGAAAATTGTATTGGATA GGTTGCTGAAAAAAATCAAGTGC
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Coding sequence (CDS) from alignment at H-paniculata_contig4799:10055..13727-

>mRNA_H-paniculata_contig4799.11876.1 ID=mRNA_H-paniculata_contig4799.11876.1|Name=mRNA_H-paniculata_contig4799.11876.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1152bp|location=Sequence derived from alignment at H-paniculata_contig4799:10055..13727- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAAGAAGAGGACAGGCGCATTCAATTGCTGGGTGCAAGGGCGCTTTC
TGATGCCGCCATTGCGGCGGTTGAGAAGGCTGAGCGCGAAGACCGTGATG
AGCCTTGTGTAAAGCGCACGCGATGCGTATACCCCGGAAAAGACTACGGA
GCGTCGGCGTGGGCAACCATGCTCCGCTGTGATTCTCTTGCCGATCCTTT
CTCCAGCGAGGCTAGGCGGTTTAGGCGCCGATTTCGTGTCCCTCACATGT
TCTTTCTCGGCCTGGTGAGCCTAGCAGAGGAGAAGAGGTGGTTCCACTCT
GCAGCCTGCGACGTCGCAGGACGTGCAGGGATCCCAGTGGAGCTCAAGAT
GGAAGAAGAGGACAGGCGCATTCAATTGCTGGGTGCAAGGGCGCTTTCTG
ATGCCGCCATTGCGGCGGTTGAGAAGGCTGAGCGCGAAGACCGTGATGAG
CCTTGTGTAAAGCGCACGCGATGCGTATACCCCGGAAAAGACTACGGAGC
GTCGGCGTGGGCAACCATGCTCCGCTGTGATTCTCTTGCCGATCCTTTCT
CCAGCGAGGCTAGGCGGTTTAGGCGCCGATTTCGTGTCCCTCACATGTTC
TTTCTCGGCCTGGTGAGCCTAGCAGAGGAGAAGAGGTGGTTCCACTCTGC
AGCCTGCGACGTCGCAGGACGTGCAGGGATCCCAGTGGAGCTCAAGGTGC
TCGCTGTTCTTCAGGTACTGAGTAGGGGAACCGTTTTGATGACATTTCTC
AGATGTCCCTCATGGGCGAGTCGACAGCGCAAGCAGCATTTCACAAGTTC
TGCAAGAACATTTCGGCAGAGCTGTTCGATGAGCATATCTTCCTGCCGAC
GGGGCAGGCTCTCGAGAAGGTTATGCATGAGTATGGCCGCTTGGGGCTCA
CCGGGGCCGTCGGCTTGTAATTGAGTGCTCGCTGTTCTTCAGGTACTGAG
TAGGGGAACCGTTTTGATGACATTTCTCAGATGTCCCTCATGGGCGAGTC
GACAGCGCAAGCAGCATTTCACAAGTTCTGCAAGAACATTTCGGCAGAGC
TGTTCGATGAGCATATCTTCCTGCCGACGGGGCAGGCTCTCGAGAAGGTT
ATGCATGAGTATGGCCGCTTGGGGCTCACCGGGGCCGTCGGCTTGTAATT
GA
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