mRNA_H-paniculata_contig11849.1187.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11849.1187.1 vs. uniprot
Match: D8LTS9_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTS9_ECTSI) HSP 1 Score: 66.2 bits (160), Expect = 3.210e-11 Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 1 Query: 1 RVHYYPMVVYLTKNKLAQVALGNCGLMLTLVLGRLIRTIFLGQLRDIEVEV 153 RV YYP VV+LT NKLAQ ALGN +++ + +GRL+ +FLG LRDIE+EV Sbjct: 25 RVEYYPTVVFLTTNKLAQAALGNWAIVMAIGMGRLVSMLFLGPLRDIEIEV 75
BLAST of mRNA_H-paniculata_contig11849.1187.1 vs. uniprot
Match: A0A4D9CLU7_9STRA (RING-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLU7_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 2.110e-10 Identity = 29/51 (56.86%), Postives = 41/51 (80.39%), Query Frame = 1 Query: 1 RVHYYPMVVYLTKNKLAQVALGNCGLMLTLVLGRLIRTIFLGQLRDIEVEV 153 RV +YP V+YL +K + + LGN GLMLTL++GR ++TIF G+LRD+EVE+ Sbjct: 28 RVQFYPAVIYLVTSKPSVLVLGNMGLMLTLLVGRTLKTIFFGRLRDVEVEL 78
BLAST of mRNA_H-paniculata_contig11849.1187.1 vs. uniprot
Match: K3WJK4_GLOUD (RING-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJK4_GLOUD) HSP 1 Score: 63.2 bits (152), Expect = 3.930e-10 Identity = 28/51 (54.90%), Postives = 41/51 (80.39%), Query Frame = 1 Query: 1 RVHYYPMVVYLTKNKLAQVALGNCGLMLTLVLGRLIRTIFLGQLRDIEVEV 153 R +YP V+YL +K++ + LGN GL+LT++LGRL++T+FLG LRD EVE+ Sbjct: 26 RQQFYPAVIYLVTSKISVLILGNAGLVLTMLLGRLVKTLFLGTLRDAEVEL 76
BLAST of mRNA_H-paniculata_contig11849.1187.1 vs. uniprot
Match: A0A7S0EA23_9EUKA (RING-type E3 ubiquitin transferase (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EA23_9EUKA) HSP 1 Score: 59.7 bits (143), Expect = 6.000e-10 Identity = 27/50 (54.00%), Postives = 40/50 (80.00%), Query Frame = 1 Query: 1 RVHYYPMVVYLTKNKLAQVALGNCGLMLTLVLGRLIRTIFLGQLRDIEVE 150 R +YP ++YLT NKL+ +ALGN LMLTL++G+L++ +F G+LR+ EVE Sbjct: 32 RRQFYPTLIYLTSNKLSLLALGNEALMLTLLVGQLVKALFFGRLREAEVE 81
BLAST of mRNA_H-paniculata_contig11849.1187.1 vs. uniprot
Match: A0A8K1F9S9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1F9S9_PYTOL) HSP 1 Score: 62.4 bits (150), Expect = 7.330e-10 Identity = 28/51 (54.90%), Postives = 40/51 (78.43%), Query Frame = 1 Query: 1 RVHYYPMVVYLTKNKLAQVALGNCGLMLTLVLGRLIRTIFLGQLRDIEVEV 153 R +YP V+YL +K++ + LGN GL++T++LGRL +TIFLG LRD EVE+ Sbjct: 26 RQQFYPAVIYLVTSKVSVLILGNAGLVVTILLGRLFKTIFLGSLRDAEVEI 76
BLAST of mRNA_H-paniculata_contig11849.1187.1 vs. uniprot
Match: A0A5D6XXN6_9STRA (Sphingomyelin phosphodiesterase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXN6_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 2.590e-9 Identity = 26/51 (50.98%), Postives = 40/51 (78.43%), Query Frame = 1 Query: 1 RVHYYPMVVYLTKNKLAQVALGNCGLMLTLVLGRLIRTIFLGQLRDIEVEV 153 R +YP V+YL +K++ + LGN GL+LT++ GRL++++FLG LRD EVE+ Sbjct: 26 RAQFYPAVIYLVTSKVSVLVLGNAGLVLTILFGRLVKSLFLGPLRDAEVEL 76
BLAST of mRNA_H-paniculata_contig11849.1187.1 vs. uniprot
Match: A0A2P4Y3R8_9STRA (Sphingomyelin phosphodiesterase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y3R8_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 3.450e-9 Identity = 28/60 (46.67%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 1 RVHYYPMVVYLTKNKLAQVALGNCGLMLTLVLGRLIRTIFLGQLRDIEVEVRRTQETGSI 180 R +YP ++YL +K++ + LGN GL+LT + GRL+++ FLG LRD EVEV +E I Sbjct: 218 RQQFYPSIIYLVTSKVSVLVLGNAGLVLTTLFGRLLKSFFLGTLRDAEVEVVAARECPEI 277
BLAST of mRNA_H-paniculata_contig11849.1187.1 vs. uniprot
Match: A0A2D4C243_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C243_PYTIN) HSP 1 Score: 60.5 bits (145), Expect = 3.500e-9 Identity = 26/51 (50.98%), Postives = 39/51 (76.47%), Query Frame = 1 Query: 1 RVHYYPMVVYLTKNKLAQVALGNCGLMLTLVLGRLIRTIFLGQLRDIEVEV 153 R +YP V+YL +K++ + LGN L+LT++ GRL++T+FLG LRD EVE+ Sbjct: 27 RQQFYPSVIYLVTSKISVLILGNAALVLTMLFGRLVKTVFLGTLRDAEVEI 77
BLAST of mRNA_H-paniculata_contig11849.1187.1 vs. uniprot
Match: A0A484EAA8_BRELC (RING-type domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EAA8_BRELC) HSP 1 Score: 60.5 bits (145), Expect = 3.500e-9 Identity = 26/51 (50.98%), Postives = 39/51 (76.47%), Query Frame = 1 Query: 1 RVHYYPMVVYLTKNKLAQVALGNCGLMLTLVLGRLIRTIFLGQLRDIEVEV 153 R +YP ++YL +K++ + LGN GL+LT + GRL++T+FLG LRD EVE+ Sbjct: 25 RQQFYPSIIYLVTSKISLLVLGNAGLVLTALFGRLVKTLFLGPLRDAEVEL 75
BLAST of mRNA_H-paniculata_contig11849.1187.1 vs. uniprot
Match: H3GIV4_PHYRM (RING-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIV4_PHYRM) HSP 1 Score: 59.3 bits (142), Expect = 8.960e-9 Identity = 27/51 (52.94%), Postives = 38/51 (74.51%), Query Frame = 1 Query: 1 RVHYYPMVVYLTKNKLAQVALGNCGLMLTLVLGRLIRTIFLGQLRDIEVEV 153 R +YP V+YL +K++ + LGN GL+LT + GRL++T FLG LRD EVE+ Sbjct: 25 RQQFYPSVIYLVTSKVSVLVLGNAGLVLTTLFGRLLKTFFLGTLRDAEVEL 75 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11849.1187.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11849.1187.1 >prot_H-paniculata_contig11849.1187.1 ID=prot_H-paniculata_contig11849.1187.1|Name=mRNA_H-paniculata_contig11849.1187.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=55bp MVVYLTKNKLAQVALGNCGLMLTLVLGRLIRTIFLGQLRDIEVEVRRTQEback to top mRNA from alignment at H-paniculata_contig11849:7704..7886+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11849.1187.1 ID=mRNA_H-paniculata_contig11849.1187.1|Name=mRNA_H-paniculata_contig11849.1187.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=183bp|location=Sequence derived from alignment at H-paniculata_contig11849:7704..7886+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11849:7704..7886+ >mRNA_H-paniculata_contig11849.1187.1 ID=mRNA_H-paniculata_contig11849.1187.1|Name=mRNA_H-paniculata_contig11849.1187.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=330bp|location=Sequence derived from alignment at H-paniculata_contig11849:7704..7886+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |