prot_H-paniculata_contig4788.11856.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4788.11856.1
Unique Nameprot_H-paniculata_contig4788.11856.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length82
Homology
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BLAST of mRNA_H-paniculata_contig4788.11856.1 vs. uniprot
Match: D8LG21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG21_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 3.550e-13
Identity = 37/54 (68.52%), Postives = 42/54 (77.78%), Query Frame = 0 
Query:   30 SASGYCEFKMIKSDVRFGNKEGGGTHFGSAERFAY-RTQYVSDAMYTIPAAKAP 82
            S +G    KM KSDVRFGNKEGGGT+FGS ERFA+ + +Y SDAMYTIP  KAP
Sbjct:   56 SGTGGVGVKMKKSDVRFGNKEGGGTNFGSEERFAWQKCKYASDAMYTIPDVKAP 109
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BLAST of mRNA_H-paniculata_contig4788.11856.1 vs. uniprot
Match: A0A6H5JC23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC23_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 3.390e-12
Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 0 
Query:   39 MIKSDVRFGNKEGGGTHFGSAERFAY-RTQYVSDAMYTIPAAKAP 82
            M KSDVRFGNKEGGGT+FGS ERFA+ + +Y SDAMYTIP  KAP
Sbjct:    1 MKKSDVRFGNKEGGGTNFGSEERFAWQKCKYASDAMYTIPDVKAP 45
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4788.11856.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LG21_ECTSI3.550e-1368.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JC23_9PHAE3.390e-1275.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4788contigH-paniculata_contig4788:12771..13016 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4788.11856.1mRNA_H-paniculata_contig4788.11856.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4788 12758..13016 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4788.11856.1 ID=prot_H-paniculata_contig4788.11856.1|Name=mRNA_H-paniculata_contig4788.11856.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=82bp
MNKNMVGVQQQSKRRARTAGAAPRLRDGPSASGYCEFKMIKSDVRFGNKE
GGGTHFGSAERFAYRTQYVSDAMYTIPAAKAP
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