mRNA_H-paniculata_contig47848.11850.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig47848.11850.1 vs. uniprot
Match: A0A0J7K416_LASNI (Lectin receptor kinase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K416_LASNI) HSP 1 Score: 87.0 bits (214), Expect = 1.660e-18 Identity = 38/81 (46.91%), Postives = 55/81 (67.90%), Query Frame = 1
Query: 1 WHEAVRVELEGLESLKAWTYVDSVGKGSSVVSARWVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFAPTVAASSVK 243
W EA+ EL+ +E WT V ++ KG +SA+W+F K+DE+GNV + KARLVARG+SQ+ +D+ E FAP V +V+
Sbjct: 189 WKEAINEELDAMEKNSTWTVVKNLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETVR 269
BLAST of mRNA_H-paniculata_contig47848.11850.1 vs. uniprot
Match: A0A0J7KM48_LASNI (Integrase catalytic domain-containing protein n=2 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KM48_LASNI) HSP 1 Score: 87.0 bits (214), Expect = 3.740e-18 Identity = 38/81 (46.91%), Postives = 55/81 (67.90%), Query Frame = 1
Query: 1 WHEAVRVELEGLESLKAWTYVDSVGKGSSVVSARWVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFAPTVAASSVK 243
W EA+ EL+ +E WT V ++ KG +SA+W+F K+DE+GNV + KARLVARG+SQ+ +D+ E FAP V +V+
Sbjct: 564 WKEAINEELDAMEKNSTWTVVKNLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETVR 644
BLAST of mRNA_H-paniculata_contig47848.11850.1 vs. uniprot
Match: A0A5C3EBA0_9BASI (Related to Retrotransposon protein n=1 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3EBA0_9BASI) HSP 1 Score: 81.6 bits (200), Expect = 2.980e-16 Identity = 36/82 (43.90%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 1 WHEAVRVELEGLESLKAWTYVDSVGKGSSVVSARWVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFAPTVAASSVKM 246
W EA++VEL+ L++ WT VD + ++A+WVF K D GNV+K KARLVARGF+Q H +D+ + + P V+ +S+++
Sbjct: 878 WEEAIKVELDSLDNTGTWTIVD-LPAARKAITAKWVFKTKQDADGNVSKYKARLVARGFTQMHGIDYHDTYLPVVSMTSLRL 958
BLAST of mRNA_H-paniculata_contig47848.11850.1 vs. uniprot
Match: A0A6G0X235_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X235_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 3.390e-15 Identity = 38/82 (46.34%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 1 WHEAVRVELEGLESLKAWTYVDSVGKGSSVVSARWVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFAPTVAASSVKM 246
W EA++VE++ L W VD + + ++VVS +WVF K D +G+V K KARLVARGFSQQ+ VD+ E ++P + SV++
Sbjct: 33 WREAMQVEIDNLIENGTWQLVD-LPRDTNVVSNKWVFKVKYDSKGDVEKFKARLVARGFSQQYGVDYTETYSPVIKQQSVRL 113
BLAST of mRNA_H-paniculata_contig47848.11850.1 vs. uniprot
Match: A0A6V7KC28_9HYME (Uncharacterized protein (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7KC28_9HYME) HSP 1 Score: 77.4 bits (189), Expect = 9.200e-15 Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 1
Query: 1 WHEAVRVELEGLESLKAWTYVDSVGKGSSVVSARWVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFAPTVAASSVK 243
W +A+++E++ L + K WT V G ++V +WVF K DE GN+ K KARLVARGFSQ++ D+ E FAP +S +
Sbjct: 815 WEDAIKMEIDSLITNKTWTLVPRPN-GKNIVDCKWVFTIKTDEHGNLAKYKARLVARGFSQEYLADYNETFAPVARIASFR 894
BLAST of mRNA_H-paniculata_contig47848.11850.1 vs. uniprot
Match: UPI001A562A11 (uncharacterized protein n=3 Tax=Ustilago hordei TaxID=120017 RepID=UPI001A562A11) HSP 1 Score: 76.3 bits (186), Expect = 2.280e-14 Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 1
Query: 1 WHEAVRVELEGLESLKAWTYVDSVGKGSSVVSARWVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFAPTVAASSVK 243
W EA+R EL+GLE++ W VD + KG++ V WV K D +TK KARLVARGF+Q+ +D+ EVFAP S++
Sbjct: 45 WEEAMRKELDGLEAMGTWEIVD-LPKGANTVDTCWVLKIKTDANLVLTKFKARLVARGFTQREGIDYTEVFAPVAPIQSIR 124
BLAST of mRNA_H-paniculata_contig47848.11850.1 vs. uniprot
Match: A0A535F797_9CHLR (DDE-type integrase/transposase/recombinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535F797_9CHLR) HSP 1 Score: 76.3 bits (186), Expect = 2.340e-14 Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 1
Query: 1 WHEAVRVELEGLESLKAWTYVDSVGKGSSVVSARWVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFAPTVAASSVKM 246
W A+ EL+ + + W VD+ KG ++VS++WVF K G + + KARLVARGFSQQH +D+ E FAP V S+++
Sbjct: 830 WSAAINEELQSIATNTVWELVDTP-KGVNIVSSKWVFKLKCLPDGRIDRYKARLVARGFSQQHGIDYYETFAPVVRLESLRI 910
BLAST of mRNA_H-paniculata_contig47848.11850.1 vs. uniprot
Match: A0A2N5TEG0_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5TEG0_9BASI) HSP 1 Score: 76.3 bits (186), Expect = 2.340e-14 Identity = 33/82 (40.24%), Postives = 51/82 (62.20%), Query Frame = 1
Query: 1 WHEAVRVELEGLESLKAWTYVDSVGKGSSVVSARWVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFAPTVAASSVKM 246
W A+ EL +E LK W+ D+ GK ++ WVF K D+ GN+TK KAR RGF+Q+ +D+ +VF+PT +S+++
Sbjct: 883 WESAISNELGNMEQLKVWSVADTAGKDIHPLTTTWVFKKKTDQDGNLTKYKARSCVRGFNQREGIDYQDVFSPTGCLTSLRI 964
BLAST of mRNA_H-paniculata_contig47848.11850.1 vs. uniprot
Match: UPI000738109D (uncharacterized protein LOC107037352 n=1 Tax=Diachasma alloeum TaxID=454923 RepID=UPI000738109D) HSP 1 Score: 71.6 bits (174), Expect = 3.090e-14 Identity = 34/81 (41.98%), Postives = 51/81 (62.96%), Query Frame = 1
Query: 1 WHEAVRVELEGLESLKAWTYVDSVGKGSSVVSARWVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFAPTVAASSVK 243
W A+ E++ LE + W ++ V KG + ++WVF K G + KARLVA+GFSQ++ +D+ EVFAP V AS+V+
Sbjct: 34 WERAIAEEIQSLEDNETWD-LEPVPKGKVPIGSKWVFRTKTTPDGGPARHKARLVAQGFSQKYGIDYDEVFAPVVKASTVR 113
BLAST of mRNA_H-paniculata_contig47848.11850.1 vs. uniprot
Match: A0A2N5TN99_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5TN99_9BASI) HSP 1 Score: 75.9 bits (185), Expect = 3.190e-14 Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 1
Query: 1 WHEAVRVELEGLESLKAWTYVDSVGKGSSVVSARWVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFAPTVAASSVKM 246
W A+ EL + LK W+ D GKG ++ WVF K D+ GN+TK KARL RGF+Q+ +D+ +VF+PT +S+++
Sbjct: 667 WEGAISNELGNMNRLKVWSVADISGKGIRPLTTTWVFKKKTDQDGNLTKYKARLCVRGFNQREGIDYQDVFSPTGRLTSLRI 748 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47848.11850.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig47848.11850.1 >prot_H-paniculata_contig47848.11850.1 ID=prot_H-paniculata_contig47848.11850.1|Name=mRNA_H-paniculata_contig47848.11850.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=82bp WHEAVRVELEGLESLKAWTYVDSVGKGSSVVSARWVFAWKIDEQGNVTKPback to top mRNA from alignment at H-paniculata_contig47848:21..266- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig47848.11850.1 ID=mRNA_H-paniculata_contig47848.11850.1|Name=mRNA_H-paniculata_contig47848.11850.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=246bp|location=Sequence derived from alignment at H-paniculata_contig47848:21..266- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig47848:21..266- >mRNA_H-paniculata_contig47848.11850.1 ID=mRNA_H-paniculata_contig47848.11850.1|Name=mRNA_H-paniculata_contig47848.11850.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=492bp|location=Sequence derived from alignment at H-paniculata_contig47848:21..266- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |