mRNA_H-paniculata_contig4744.11786.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4744.11786.1
Unique NamemRNA_H-paniculata_contig4744.11786.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig4744.11786.1 vs. uniprot
Match: A0A6H5KJZ4_9PHAE (General transcription factor IIH subunit 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJZ4_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 2.310e-75
Identity = 120/161 (74.53%), Postives = 135/161 (83.85%), Query Frame = 1 
Query:    1 ILSSGT--NANVFEILERLPADALDKLYGKGVVTAKGMTS-NHGQWTCRAILQSLPQLAKQHVMRLLFVEEYVEKGMLKSWVKKEYHRVHSTSIRRLVSLRVLLQKNDGQEYLLNPPFRESLQRALCASDKTPWQGDVPLVPDRSPPSIAKIEQKMHSQWQ 474
            +L+S T  + NVF+ LERLP DALDKLYG     A+G    +HGQWTCRA+LQSLPQLAKQHVMRLLFVE  V KGMLKSWVKKEY RVH+ S+R+LVSLRVLL   DGQEY LNPPFRE+LQRALCASDKTPWQGDVPL  DRSPP++AKIE++MHSQWQ
Sbjct:   12 LLASTTTMSLNVFDYLERLPPDALDKLYGAAPPAAQGQGGRSHGQWTCRALLQSLPQLAKQHVMRLLFVEGPVGKGMLKSWVKKEYQRVHAASVRKLVSLRVLLPSADGQEYQLNPPFRENLQRALCASDKTPWQGDVPLSADRSPPTVAKIERQMHSQWQ 172
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BLAST of mRNA_H-paniculata_contig4744.11786.1 vs. uniprot
Match: D7FHY7_ECTSI (General transcription factor IIH subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY7_ECTSI)

HSP 1 Score: 236 bits (603), Expect = 6.460e-73
Identity = 119/161 (73.91%), Postives = 133/161 (82.61%), Query Frame = 1 
Query:    1 ILSSGT--NANVFEILERLPADALDKLYGKGVVTAKGMTS-NHGQWTCRAILQSLPQLAKQHVMRLLFVEEYVEKGMLKSWVKKEYHRVHSTSIRRLVSLRVLLQKNDGQEYLLNPPFRESLQRALCASDKTPWQGDVPLVPDRSPPSIAKIEQKMHSQWQ 474
            +L+S T  + NVF+ LERLP DALDKLYG     A G    +HGQWTCRA+LQSLPQLAKQHVMRLLFVE  V KGMLKSWVKKEY RVH+ S+R+LVSLRVLL    GQEY LNPPFRE+LQRALCASDKTPWQGDVPL  DRSPP++AKIE++MHSQWQ
Sbjct:   12 LLASATTMSLNVFDYLERLPPDALDKLYGAAPPAADGQGGRSHGQWTCRALLQSLPQLAKQHVMRLLFVEGPVGKGMLKSWVKKEYQRVHAASVRKLVSLRVLLPSAGGQEYQLNPPFRENLQRALCASDKTPWQGDVPLSADRSPPTVAKIERQMHSQWQ 172
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BLAST of mRNA_H-paniculata_contig4744.11786.1 vs. uniprot
Match: A0A1V9ZYD0_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYD0_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 8.130e-16
Identity = 50/149 (33.56%), Postives = 71/149 (47.65%), Query Frame = 1 
Query:   25 NVFEILERLPADALDKLYGKGVVTAKGMTSNHGQWTCRAILQSLPQLAKQHVMRLLFVEEYVEKGMLKSWVKKEYHRVHSTSIRRLVSLRVLLQKNDGQEYLLNPPFRESLQRALCASDKTPWQGDVPLVPDRSPPSIAKIEQKMHSQW 471
            N FE L  LP  ++D+L+             +  W C+A+ QSLP LA+Q VMRLLF         L  WVK       + SI +L  LRVL +  +GQ   LNP F+  L+ AL +   +PW+     +    P S  ++E     +W
Sbjct:    2 NAFEYLTTLPVASVDRLF-------------NDPWACQAVFQSLPSLAQQVVMRLLFSHSPTPLSSLNEWVKPSAIETINLSIEKLCHLRVLSKSGNGQ-IQLNPNFKAQLKAALSSLGGSPWEEGRKKIKQEKPISAVQLEHYARKRW 136
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BLAST of mRNA_H-paniculata_contig4744.11786.1 vs. uniprot
Match: I0YPN8_COCSC (RNA polymerase II transcription factor B subunit 2 n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YPN8_COCSC)

HSP 1 Score: 82.8 bits (203), Expect = 1.460e-15
Identity = 54/150 (36.00%), Postives = 81/150 (54.00%), Query Frame = 1 
Query:   40 LERLPADALDKLYGKGVVTAKGMTSNHGQWTCRAILQSLPQLAKQHVMRLLFVEEYVEKGMLKSWVKKEYHRVHSTSIRRLVSLRVLLQKN---DGQE--YLLNPPFRESLQRALCASDKTPWQGDVPLVPDRSPPSIAKIEQKMHSQWQ 474
            LE LPAD + KLY           S+H  W C+A+L+ L  LAKQ+V+R+LF++  V K ++ SW+ +     H+T+I RL  L++LL  N   +GQ+  Y L+P FRE L+ A+    K     +VP    +  PS   +      QW+
Sbjct:    7 LETLPADTVGKLY-----------SSH--WACQAVLRGLTSLAKQYVIRMLFLDVPVTKSVMDSWIAQSSKSKHATAINRLKGLQLLLPSNVASNGQQAAYQLHPVFREQLRWAVSTGGKVGID-EVPAGVLQQAPSREMLSSYAQQQWE 142
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BLAST of mRNA_H-paniculata_contig4744.11786.1 vs. uniprot
Match: A0A2R6WYY1_MARPO (RNA polymerase II transcription factor B subunit 2 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WYY1_MARPO)

HSP 1 Score: 82.8 bits (203), Expect = 1.500e-15
Identity = 51/153 (33.33%), Postives = 77/153 (50.33%), Query Frame = 1 
Query:   25 NVFEILERLPADALDKLYGKGVVTAKGMTSNHGQWTCRAILQSLPQLAKQHVMRLLFVEEYVEKGMLKSWVKKEYHRVHSTSIRRLVSLRVLLQKNDGQE---YLLNPPFRESLQRALCASDKTPWQGDVPLVPDRSPPSIAKIEQKMHSQWQ 474
            N  E++  LPA  LD+LYG               WTC+A+++SLP LAKQ+V+RLLFVE  V    ++ W   +    H  +I +L  LRVL++  + ++   Y LNP  ++ LQ  L      P +  +P       PS+  +E     QW+
Sbjct:   10 NFMEMVAALPAAKLDELYGS-------------PWTCQAVVRSLPPLAKQYVLRLLFVEAAVSSKSIQDWALPDALNKHKVAIDKLEQLRVLIEATERRKEVSYKLNPRLQKQLQDVLKTGGGVPRES-LPASFAARVPSLVDLENYAMKQWE 148
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BLAST of mRNA_H-paniculata_contig4744.11786.1 vs. uniprot
Match: A0A061S035_9CHLO (RNA polymerase II transcription factor B subunit 2 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S035_9CHLO)

HSP 1 Score: 80.5 bits (197), Expect = 9.630e-15
Identity = 47/153 (30.72%), Postives = 77/153 (50.33%), Query Frame = 1 
Query:   25 NVFEILERLPADALDKLYGKGVVTAKGMTSNHGQWTCRAILQSLPQLAKQHVMRLLFVEEYVEKGMLKSWVKKEYHRVHSTSIRRLVSLRVLLQKND---GQEYLLNPPFRESLQRALCASDKTPWQGDVPLVPDRSPPSIAKIEQKMHSQWQ 474
            N+   LE LP   L  +Y                WTC+A+L++LP +AKQ+V+R+LF+   V +  + +W +      H+ ++  +  L++L  + D   G  Y L P F+ +LQRALC        G VP    ++ PS A +E+   +QW+
Sbjct:    6 NLLNYLEELPPIKLRNIY-------------ESHWTCQAVLRALPPIAKQYVLRILFIAGSVPENTVSNWSQSAASDKHAAALDAMQRLQILQPQPDRAGGCSYALQPAFQANLQRALCLRHPG-GSGGVPAAVKQAAPSPADVEKYSSNQWE 144
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BLAST of mRNA_H-paniculata_contig4744.11786.1 vs. uniprot
Match: A0A1Y1I418_KLENI (RNA polymerase II transcription factor B subunit 2 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I418_KLENI)

HSP 1 Score: 79.7 bits (195), Expect = 1.800e-14
Identity = 53/151 (35.10%), Postives = 76/151 (50.33%), Query Frame = 1 
Query:   40 LERLPADALDKLYGKGVVTAKGMTSNHGQWTCRAILQSLPQLAKQHVMRLLFVEEYVEKGMLKSWVKKEYHRVHSTSIRRLVSLRVLLQ------KNDGQEYLLNPPFRESLQRALCASDKTPWQGDVPLVPDRSPPSIAKIEQKMHSQWQ 474
            L  LP   LD+LY                +TC+A+L+SLP +AKQ+V+RLLF+E+ +    ++ W K E    H+ ++ RL  LRVLL+      K D   Y LNP F++ LQRAL  +   P     P +    P S A +      QW+
Sbjct:    7 LSELPPVKLDRLY-------------ESHFTCQAVLRSLPPIAKQYVLRLLFIEQPIAGETMRGWAKPEALGKHNAAMERLDQLRVLLETGGKSGKKDAS-YRLNPVFQQQLQRALSGAIGPPKDPLPPALASHKP-SPADLNAYALKQWE 142
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BLAST of mRNA_H-paniculata_contig4744.11786.1 vs. uniprot
Match: A0A3B4UAE7_SERDU (General transcription factor IIH subunit 4 n=7 Tax=Clupeocephala TaxID=186625 RepID=A0A3B4UAE7_SERDU)

HSP 1 Score: 77.4 bits (189), Expect = 1.190e-13
Identity = 50/153 (32.68%), Postives = 78/153 (50.98%), Query Frame = 1 
Query:   25 NVFEILERLPADALDKLYGKGVVTAKGMTSNHGQWTCRAILQSLPQLAKQHVMRLLFVEEYVEKGMLKSWVKKEYHRVHSTSIRRLVSLRVL-LQKNDG--QEYLLNPPFRESLQRALCASDKTPWQGDVPLVPDRSPPSIAKIEQKMHSQWQ 474
            N+ E L  L  D LD+LY            NH   TC A+ + LP LAK +VMR+LF+++ + +  +  WVKK+ H+ H   +  L  LR+   Q+  G  Q Y+LNP F+++L+ AL    +        L PDR    I  +++    +W+
Sbjct:   11 NLHEYLRELSPDILDRLY------------NHPA-TCLAVYRELPSLAKNYVMRMLFLDQPLPQAAVALWVKKDSHKDHDECVSVLAGLRLWHSQQLQGGLQGYILNPVFKDNLRIALLGGGRAWADEGSTLGPDRHARDIESLDRYAMERWE 150
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BLAST of mRNA_H-paniculata_contig4744.11786.1 vs. uniprot
Match: A0A3B4UAI4_SERDU (General transcription factor IIH subunit 4 n=2 Tax=Seriola dumerili TaxID=41447 RepID=A0A3B4UAI4_SERDU)

HSP 1 Score: 77.4 bits (189), Expect = 1.270e-13
Identity = 50/153 (32.68%), Postives = 78/153 (50.98%), Query Frame = 1 
Query:   25 NVFEILERLPADALDKLYGKGVVTAKGMTSNHGQWTCRAILQSLPQLAKQHVMRLLFVEEYVEKGMLKSWVKKEYHRVHSTSIRRLVSLRVL-LQKNDG--QEYLLNPPFRESLQRALCASDKTPWQGDVPLVPDRSPPSIAKIEQKMHSQWQ 474
            N+ E L  L  D LD+LY            NH   TC A+ + LP LAK +VMR+LF+++ + +  +  WVKK+ H+ H   +  L  LR+   Q+  G  Q Y+LNP F+++L+ AL    +        L PDR    I  +++    +W+
Sbjct:   47 NLHEYLRELSPDILDRLY------------NHPA-TCLAVYRELPSLAKNYVMRMLFLDQPLPQAAVALWVKKDSHKDHDECVSVLAGLRLWHSQQLQGGLQGYILNPVFKDNLRIALLGGGRAWADEGSTLGPDRHARDIESLDRYAMERWE 186
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BLAST of mRNA_H-paniculata_contig4744.11786.1 vs. uniprot
Match: UPI00202671EA (general transcription factor IIH subunit 4-like n=1 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI00202671EA)

HSP 1 Score: 75.5 bits (184), Expect = 1.440e-13
Identity = 52/154 (33.77%), Postives = 76/154 (49.35%), Query Frame = 1 
Query:   25 NVFEILERLPADALDKLYGKGVVTAKGMTSNHGQWTCRAILQSLPQLAKQHVMRLLFVEEYVEKGMLKSWVKKEYHRVHSTSIRRLVSLRVL---LQKNDGQEYLLNPPFRESLQRALCASDKTPWQGDVP-LVPDRSPPSIAKIEQKMHSQWQ 474
            N+ E L  L    LD+LY            NH   TC A+ + LP LAK +VMR+LF+E+ + K  + SWVKK+Y +    S   L+ LR+    L     Q  +LNP F+E+L  AL    K  W  D   L PD+    +  +++    +W+
Sbjct:   16 NLHEFLRGLSPGILDRLY------------NHPA-TCLAVFRELPGLAKNYVMRMLFLEQALPKAAVASWVKKDYVKEQDESSDVLLGLRLWHTQLLPGGLQGIILNPIFKENLHIALLGGGKA-WSDDTSQLGPDKHARDVPSLDKYAEERWE 155
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4744.11786.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJZ4_9PHAE2.310e-7574.53General transcription factor IIH subunit 4 n=1 Tax... [more]
D7FHY7_ECTSI6.460e-7373.91General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A1V9ZYD0_9STRA8.130e-1633.56General transcription factor IIH subunit 4 n=1 Tax... [more]
I0YPN8_COCSC1.460e-1536.00RNA polymerase II transcription factor B subunit 2... [more]
A0A2R6WYY1_MARPO1.500e-1533.33RNA polymerase II transcription factor B subunit 2... [more]
A0A061S035_9CHLO9.630e-1530.72RNA polymerase II transcription factor B subunit 2... [more]
A0A1Y1I418_KLENI1.800e-1435.10RNA polymerase II transcription factor B subunit 2... [more]
A0A3B4UAE7_SERDU1.190e-1332.68General transcription factor IIH subunit 4 n=7 Tax... [more]
A0A3B4UAI4_SERDU1.270e-1332.68General transcription factor IIH subunit 4 n=2 Tax... [more]
UPI00202671EA1.440e-1333.77general transcription factor IIH subunit 4-like n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4744contigH-paniculata_contig4744:224..3095 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score238.0
Seed ortholog evalue2.9e-60
Seed eggNOG ortholog2880.D7FHY7
Preferred nameGTF2H4
KEGG rclassRC00055,RC00523
KEGG koko:K01873,ko:K03144
KEGG ReactionR03665
KEGG Pathwayko00970,ko03022,ko03420,ko05203,map00970,map03022,map03420,map05203
KEGG ModuleM00290,M00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000109,GO:0000112,GO:0000428,GO:0000438,GO:0000439,GO:0000717,GO:0000988,GO:0000990,GO:0000991,GO:0001109,GO:0001111,GO:0001112,GO:0001113,GO:0001120,GO:0001671,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005669,GO:0005675,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006293,GO:0006294,GO:0006296,GO:0006351,GO:0006352,GO:0006353,GO:0006354,GO:0006355,GO:0006357,GO:0006360,GO:0006361,GO:0006363,GO:0006366,GO:0006367,GO:0006368,GO:0006370,GO:0006396,GO:0006397,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008047,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009452,GO:0009628,GO:0009889,GO:0009987,GO:0010224,GO:0010467,GO:0010468,GO:0010556,GO:0016043,GO:0016070,GO:0016071,GO:0016310,GO:0016591,GO:0016604,GO:0016607,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0022607,GO:0030234,GO:0030880,GO:0031323,GO:0031326,GO:0031334,GO:0031974,GO:0031981,GO:0032392,GO:0032508,GO:0032774,GO:0032781,GO:0032806,GO:0032991,GO:0033554,GO:0033683,GO:0034367,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0036211,GO:0036260,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0043412,GO:0043462,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044798,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051252,GO:0051276,GO:0051336,GO:0051345,GO:0051716,GO:0055029,GO:0060255,GO:0060589,GO:0060590,GO:0061695,GO:0065003,GO:0065004,GO:0065007,GO:0065009,GO:0070013,GO:0070816,GO:0070911,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090575,GO:0097159,GO:0097659,GO:0098772,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1902494,GO:1902554,GO:1902911,GO:1903506,GO:1990234,GO:1990391,GO:2000112,GO:2001141
EggNOG free text desc.Helicase conserved C-terminal domain
EggNOG OGsCOG5144@1,KOG3471@2759
Ec32 ortholog descriptionTranscription factor TFIIH subunit p52/Tfb2
Ec32 orthologEc-12_006390.1
EC6.1.1.9
COG Functional cat.KL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03021,ko03400
Exons3
Model size474
Cds size474
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4744.11786.1prot_H-paniculata_contig4744.11786.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4744 224..3095 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930409.791393-CDS-H-paniculata_contig4744:223..3011622930409.791393-CDS-H-paniculata_contig4744:223..301Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4744 224..301 -
1691481279.046839-CDS-H-paniculata_contig4744:223..3011691481279.046839-CDS-H-paniculata_contig4744:223..301Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4744 224..301 -
1622930409.809651-CDS-H-paniculata_contig4744:898..10151622930409.809651-CDS-H-paniculata_contig4744:898..1015Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4744 899..1015 -
1691481279.066575-CDS-H-paniculata_contig4744:898..10151691481279.066575-CDS-H-paniculata_contig4744:898..1015Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4744 899..1015 -
1622930409.820665-CDS-H-paniculata_contig4744:2816..30951622930409.820665-CDS-H-paniculata_contig4744:2816..3095Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4744 2817..3095 -
1691481279.075322-CDS-H-paniculata_contig4744:2816..30951691481279.075322-CDS-H-paniculata_contig4744:2816..3095Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4744 2817..3095 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4744.11786.1

>prot_H-paniculata_contig4744.11786.1 ID=prot_H-paniculata_contig4744.11786.1|Name=mRNA_H-paniculata_contig4744.11786.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=158bp
ILSSGTNANVFEILERLPADALDKLYGKGVVTAKGMTSNHGQWTCRAILQ
SLPQLAKQHVMRLLFVEEYVEKGMLKSWVKKEYHRVHSTSIRRLVSLRVL
LQKNDGQEYLLNPPFRESLQRALCASDKTPWQGDVPLVPDRSPPSIAKIE
QKMHSQWQ
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mRNA from alignment at H-paniculata_contig4744:224..3095-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4744.11786.1 ID=mRNA_H-paniculata_contig4744.11786.1|Name=mRNA_H-paniculata_contig4744.11786.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2872bp|location=Sequence derived from alignment at H-paniculata_contig4744:224..3095- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATATTATCGTCCGGGACGAACGCCAACGTGTTCGAGATTCTGGAGCGGTT
GCCTGCGGATGCCCTGGACAAGCTGTACGGGAAGGGGGTGGTAACCGCGA
AGGGGATGACCAGTAACCATGGACAGTGGACGTGCCGGGCCATCCTGCAG
TCTCTGCCGCAGCTCGCCAAGCAGCATGTCATGCGGCTGTTATTTGTGGA
GGAATATGTGGAGAAGGGTATGCTGAAGTCGTGGGTGAAGAAGGAGTATC
ACCGCGTCCACTCCACCTCGATCCGAAGGGTGAATACTACTGTGGCTGAG
CTGTAGGTCTTCTTGGGAGATACTGGTACAGCTCATCAGAGAGTGTGTGT
ATTGAACACGCTATAGTACAGTTTCGCTTTGAATATTGTCTCTGTTTCGT
TGTTGCCGAAATAACTCTGCATTATGTAGCTTTGTGTCTTGTCATGGTGA
GTACTGTTCACCATCTGCCATAACGTCGTGGCAAGGATACCACCCCAGCG
GAGACATTTATAGCGGGGTTGCAAATTAGCGTCGTTTGTGTCTGCAGACG
GGTTGAACAAATCTCAGCAACGTGACAACACTTGGAAAAGGAATCGATTA
TTGCTCGGACAAAAGCTGTTTTCTCAGATTTGTCATGTCCAGCACGGACA
AGAATAGATGAATCGGCACACTGATATACTCCCTTGTAGTTATTTTTTGG
GCTAGCGACTAAACGGTTATAACAGATCCCTTTCGGACTAAAACAATTGT
AGAAAAAAAAATCATTAGAAAGAACGGTGCCAGCACCCCGAAAACGAGCA
AGAACTCCCTTCCGGGGTGAGCATATATTGCCCCTCGGCACCTTCCCCGA
TCATTGGTTGGTGTCCAACTGGTCGGAATATGGACAGAAACGGTTTAAGA
CGACCCGTATGATCAAGTCCGTACTCGTAACAGCGATGAAGAGGGAAGGA
ACGGCGTTTTTTTTCTGAATTTGTTTTAGGTAGGTCGGGGAAGGTGCCGA
GATGCACGTGCCCCCCCCCCCCCCCCCCCCCCCCCAAAGGGGGTTCTTGC
TTGTTTTGGGACTGCTGGCACCGTTGTTCCTAGTGCATTTTTACCACAAC
CGTTCTAGTCCAAAAAGGGACCGGTTATGACCGTTTTTGTTGTTTGCCCT
CAAGTTTTCAAAACGCTGGGGTGGGTGGGTTGGTAATTGTGTCAACCCTG
ATACTGTTTGCTTCCTTGCCGTTCACCGATTAGCAGGAGTCTACCTTAAG
TCCAATGAATGAGCAAATGTTGCAGGCCTGATCTAGGAGCTACGGATTAG
GAATTCTTGTAACCCTCTTCGGAACGTCTCTATATGATGACCATGTGCTG
TTCCTACATGGCGATGGTGCTGTGTGATAAATGAGACGTAGAAAGAGACG
ATCACTACTGCGATCAAAGTGTGGGTTGCATTATAACAAATTTCCACACG
AAATATGGGCAGCAAACCCTGCCGAGGGGACGGGGGGGGGGAGGAGGGGA
TATTCACGTTTTGCATGCCGTAGTTTTTAGACGGTTGACCACGCGTTTCT
GAGAAGACGGAGTATGCGATCAAATCCCTGGACATACTTCTTGGACTCGC
CAAGTTTGACGTTGAGGTAGGCGTCAACTGTTTGTTTCCGTTTCTCTTAT
ATTCAGAAGCATCAACCCTGCAAACAAGGGTATTGTGAAACAAGACAAAA
ACAAGGCAACGATCGGGCCAAAATTATATTGAGGGAGATCCGGTGAAAGT
AGCTTTGCGATATTGCGCGACTCCGTCGTCAACTTTTGCAGTATGTTTAA
GTTCCCTAATGTATATATATAAAGAATAAAAATTAGCACCATCCAGTCAA
CTTCTCACAAATCTTTAGCCTTATCTATATGTGTATATATATATATATAT
GTATCCAAGTATGTGCTCTATCTGAGAGAGGTTGGAATGGCGATAAGGCA
AGAAAAAAACAAAAAAAACAGAGTTAGCTTTGGGTTGCAATTGCATTACA
GAGACTAAACTGTTTAACGTTTGTTGTATCTTTGCTCGATATTCGTTGAT
ATCCTGTCCTGTACGATACGCATGTATTAGCTGGTGAGCTTGAGGGTTCT
ACTACAGAAGAATGATGGACAAGAGTACCTGCTGAACCCACCGTTCCGAG
AAAGCTTGCAACGCGCTCTGTGCGCCTCGGACAAGACACCTTGGCAGGTG
GGTAATTTGTTTTTGGGTTATGGTTAACATACTGCGTAATCATGCTCTAA
AACTTGAGGGTGGTAGTGCCTGGCACACTGTATCCTACGCTCTAAGGAAA
TTTTCTGGATGTTAATGGTGTCAATCGAACACTGAGATTATCTAGTTCCT
GTAAGCTATTTCGGAGCTCAAAACAGAAGCAGTTGGCGCTCGATGTTGTG
CTATTTTTTGCCAATCACCCCCTTTTTGACGCACGCAGGGTAGCACGGAA
GCATGTCACAGTCAAATATTACTTGCGAACCTACATCTTCTTGAGGAGAG
TACTGGAACCTCGGCAGTACCATCCCATGTACCCCTTGATCATTTTGTCC
AGATTGTGGTCGTGTACGCCGTTGATTTAAGGGAGCTGACCTATCTTCGC
CAAAAATACGTGCAGTTAGTTTGGAACATGGAGAAGTTGATCCCCTCTCC
TCCCTCCCGTGAAGGGCGCGTGCGTGCGAAGTCAAGTGCTGCTTGTCGTG
ATAATGGAAAAAGACGGGGGGTTGATGAGAAAAGATCACCCTCGCTTGTT
TTGCTTGTGTGTGTTCGTGTGCCTGTTTTTCTGTTCTTATTCAGGGGGAC
GTGCCTCTCGTGCCGGACCGAAGTCCTCCATCCATTGCCAAGATCGAGCA
GAAGATGCACTCTCAGTGGCAA
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Coding sequence (CDS) from alignment at H-paniculata_contig4744:224..3095-

>mRNA_H-paniculata_contig4744.11786.1 ID=mRNA_H-paniculata_contig4744.11786.1|Name=mRNA_H-paniculata_contig4744.11786.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=948bp|location=Sequence derived from alignment at H-paniculata_contig4744:224..3095- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATATTATCGTCCGGGACGAACGCCAACGTGTTCGAGATTCTGGAGCGGTT
GCCTGCGGATGCCCTGGACAAGCTGTACGGGAAGGGGGTGGTAACCGCGA
AGGGGATGACCAGTAACCATGGACAGTGGACGTGCCGGGCCATCCTGCAG
TCTCTGCCGCAGCTCGCCAAGCAGCATGTCATGCGGCTGTTATTTGTGGA
GGAATATGTGGAGAAGGGTATGCTGAAGTCGTGGGTGAAGAAGGAGTATC
ACCGCGTCCACTCCACCTCGATCCGAAGGATATTATCGTCCGGGACGAAC
GCCAACGTGTTCGAGATTCTGGAGCGGTTGCCTGCGGATGCCCTGGACAA
GCTGTACGGGAAGGGGGTGGTAACCGCGAAGGGGATGACCAGTAACCATG
GACAGTGGACGTGCCGGGCCATCCTGCAGTCTCTGCCGCAGCTCGCCAAG
CAGCATGTCATGCGGCTGTTATTTGTGGAGGAATATGTGGAGAAGGGTAT
GCTGAAGTCGTGGGTGAAGAAGGAGTATCACCGCGTCCACTCCACCTCGA
TCCGAAGGCTGGTGAGCTTGAGGGTTCTACTACAGAAGAATGATGGACAA
GAGTACCTGCTGAACCCACCGTTCCGAGAAAGCTTGCAACGCGCTCTGTG
CGCCTCGGACAAGACACCTTGGCAGCTGGTGAGCTTGAGGGTTCTACTAC
AGAAGAATGATGGACAAGAGTACCTGCTGAACCCACCGTTCCGAGAAAGC
TTGCAACGCGCTCTGTGCGCCTCGGACAAGACACCTTGGCAGGGGGACGT
GCCTCTCGTGCCGGACCGAAGTCCTCCATCCATTGCCAAGATCGAGCAGA
AGATGCACTCTCAGTGGCAAGGGGACGTGCCTCTCGTGCCGGACCGAAGT
CCTCCATCCATTGCCAAGATCGAGCAGAAGATGCACTCTCAGTGGCAA
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