prot_H-paniculata_contig47125.11728.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig47125.11728.1
Unique Nameprot_H-paniculata_contig47125.11728.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length219
Homology
BLAST of mRNA_H-paniculata_contig47125.11728.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 9.520e-41
Identity = 84/199 (42.21%), Postives = 121/199 (60.80%), Query Frame = 0
Query:    8 EEAEEMRAFPYRGAVGALMWAATMRRPDIAHVVRTTKTFYENPGMEHTRAVGKILQYVLRTADLGITYG-GKDCEVEMLACANSDYATCQDSQRSVSGGAVLLGGEAVRWHARTQEMTAAETIEAEYVALVEMVNEVLFLRQVQAFIIPTLEHYSVIIKEDNQGAAKITHNKHSSRRTRHINVKHHNVHDAVEAGKVDI 205
            +E E     P+R  VG+LMW AT  RPDIA+ VR    +  +P M H +A   IL YV RT+ +GIT+  G    + M    ++DYA+    +RSVSGG V+ GG  V W +RTQ+     T EAEYVA+ +++ EVLFLRQV  F++P      + + EDNQGA +I HN  ++  ++HI+V+HH + + VE  ++ I
Sbjct:   90 DENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISI 288          
BLAST of mRNA_H-paniculata_contig47125.11728.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 2.310e-40
Identity = 84/199 (42.21%), Postives = 121/199 (60.80%), Query Frame = 0
Query:    8 EEAEEMRAFPYRGAVGALMWAATMRRPDIAHVVRTTKTFYENPGMEHTRAVGKILQYVLRTADLGITYG-GKDCEVEMLACANSDYATCQDSQRSVSGGAVLLGGEAVRWHARTQEMTAAETIEAEYVALVEMVNEVLFLRQVQAFIIPTLEHYSVIIKEDNQGAAKITHNKHSSRRTRHINVKHHNVHDAVEAGKVDI 205
            +E E     P+R  VG+LMW AT  RPDIA+ VR    +  +P M H +A   IL YV RT+ +GIT+  G    + M    ++DYA+    +RSVSGG V+ GG  V W +RTQ+     T EAEYVA+ +++ EVLFLRQV  F++P      + + EDNQGA +I HN  ++  ++HI+V+HH + + VE  ++ I
Sbjct:  145 DENEASADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISI 343          
BLAST of mRNA_H-paniculata_contig47125.11728.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 1.070e-39
Identity = 84/199 (42.21%), Postives = 121/199 (60.80%), Query Frame = 0
Query:    8 EEAEEMRAFPYRGAVGALMWAATMRRPDIAHVVRTTKTFYENPGMEHTRAVGKILQYVLRTADLGITYG-GKDCEVEMLACANSDYATCQDSQRSVSGGAVLLGGEAVRWHARTQEMTAAETIEAEYVALVEMVNEVLFLRQVQAFIIPTLEHYSVIIKEDNQGAAKITHNKHSSRRTRHINVKHHNVHDAVEAGKVDI 205
            +E E     P+R  VG+LMW AT  RPDIA+ VR    +  +P M H +A   IL YV RT+ +GIT+  G    + M    ++DYA+    +RSVSGG V+ GG  V W +RTQ+     T EAEYVA+ +++ EVLFLRQV  F++P      + + EDNQGA +I HN  ++  ++HI+V+HH + + VE  ++ I
Sbjct:  207 DENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISI 405          
BLAST of mRNA_H-paniculata_contig47125.11728.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 3.180e-39
Identity = 84/206 (40.78%), Postives = 126/206 (61.17%), Query Frame = 0
Query:    3 GPKTSE--EAEEMRAFPYRGAVGALMWAATMRRPDIAHVVRTTKTFYENPGMEHTRAVGKILQYVLRTADLGITYG-GKDCEVEMLACANSDYATCQDSQRSVSGGAVLLGGEAVRWHARTQEMTAAETIEAEYVALVEMVNEVLFLRQVQAFIIPTLEHYSVIIKEDNQGAAKITHNKHSSRRTRHINVKHHNVHDAVEAGKVDI 205
            G K SE  + EE+ ++P+R  +G+LMW AT  RP+IA+  R    +  +P   H RA   IL YV+RT+DLGIT+G G    + M   A++DYA+    +RSVSGG V+ G   + W +RTQ+     T EAEYV+L +++ EVLFLRQV  F++P      + + EDNQGA ++  N  S+  ++H +V+HH + + V   ++ I
Sbjct:   55 GLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPNIANAARAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAGLSMEVFADADYASKAADRRSVSGGFVMCGRGCISWFSRTQQCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHFDVRHHFIGELVGRKEISI 260          
BLAST of mRNA_H-paniculata_contig47125.11728.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 5.070e-38
Identity = 84/199 (42.21%), Postives = 121/199 (60.80%), Query Frame = 0
Query:    8 EEAEEMRAFPYRGAVGALMWAATMRRPDIAHVVRTTKTFYENPGMEHTRAVGKILQYVLRTADLGITYG-GKDCEVEMLACANSDYATCQDSQRSVSGGAVLLGGEAVRWHARTQEMTAAETIEAEYVALVEMVNEVLFLRQVQAFIIPTLEHYSVIIKEDNQGAAKITHNKHSSRRTRHINVKHHNVHDAVEAGKVDI 205
            +E E     P+R  VG+LMW AT  RPDIA+ VR    +  +P M H +A   IL YV RT+ +GIT+  G    + M    ++DYA+    +RSVSGG V+ GG  V W +RTQ+     T EAEYVA+ +++ EVLFLRQV  F++P      + + EDNQGA +I HN  ++  ++HI+V+HH + + VE  ++ I
Sbjct: 1241 DENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISI 1439          
BLAST of mRNA_H-paniculata_contig47125.11728.1 vs. uniprot
Match: A0A6H5K8K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K2_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 7.350e-38
Identity = 80/199 (40.20%), Postives = 117/199 (58.79%), Query Frame = 0
Query:    8 EEAEEMRAFPYRGAVGALMWAATMRRPDIAHVVRTTKTFYENPGMEHTRAVGKILQYVLRTADLGITYG-GKDCEVEMLACANSDYATCQDSQRSVSGGAVLLGGEAVRWHARTQEMTAAETIEAEYVALVEMVNEVLFLRQVQAFIIPTLEHYSVIIKEDNQGAAKITHNKHSSRRTRHINVKHHNVHDAVEAGKVDI 205
            +E E     P+R  VG++MW AT  RPDIA+ VR    +  +P M H +A   IL YV RT+ +GIT+  G    + M    ++DY      +RSVSGG V+ GG  V W +RTQ+     T EAEYVA+ +++ EVLFLRQV  F++P      + + EDNQGA ++ HN  ++  ++HI+ +HH +   VE  ++ I
Sbjct:   62 DENEACADVPFRELVGSVMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYVRKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQVAHNPITNSNSKHIDERHHLIRKLVERKEISI 260          
BLAST of mRNA_H-paniculata_contig47125.11728.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 1.720e-37
Identity = 83/209 (39.71%), Postives = 127/209 (60.77%), Query Frame = 0
Query:    1 NDGPKTSE-EAEEMRA-FPYRGAVGALMWAATMRRPDIAHVVRTTKTFYENPGMEHTRAVGKILQYVLRTADLGITYGGKDCE-VEMLACANSDYATCQDSQRSVSGGAVLLGGEAVRWHARTQEMTAAETIEAEYVALVEMVNEVLFLRQVQAFIIPTLEHYSVIIKEDNQGAAKITHNKHSSRRTRHINVKHHNVHDAVEAGKVDIV 206
            + G K S+ +A+E+   FP+R  VG+LMW AT  RPDIA+ VR    +  +P + H  A   IL Y  RT+  GI++     E   +   A++D+A+    +RSVSGG V  GG AV W +RTQ+     T EAEYVAL ++V E+LFLRQ+  F++P +    + + EDNQGA ++  N  S+  ++HI+V+HH + + VE  ++ ++
Sbjct:  222 SSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVI 430          
BLAST of mRNA_H-paniculata_contig47125.11728.1 vs. uniprot
Match: A0A6H5JMV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV5_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 2.720e-37
Identity = 79/197 (40.10%), Postives = 115/197 (58.38%), Query Frame = 0
Query:    8 EEAEEMRAFPYRGAVGALMWAATMRRPDIAHVVRTTKTFYENPGMEHTRAVGKILQYVLRTADLGITYG-GKDCEVEMLACANSDYATCQDSQRSVSGGAVLLGGEAVRWHARTQEMTAAETIEAEYVALVEMVNEVLFLRQVQAFIIPTLEHYSVIIKEDNQGAAKITHNKHSSRRTRHINVKHHNVHDAVEAGKV 203
            +E E     P+R  VG+LMW AT  RPDIA+ VR    +  +P M H +A   IL YV RT+ +GI +  G    + +    ++DY +     RSVSGG V+ GG  V W +RTQ+  A  T E +YVA+  ++ EVLFLRQV  F++P      + + EDNQGA +I HN  ++   +HI+V+HH + + VE  ++
Sbjct:   47 DENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGIAFERGVVTGMSVQVFVDADYTSKATEHRSVSGGRVICGGGCVTWFSRTQKCVALSTTETQYVAIANVLKEVLFLRQVWRFMLPDAGIPCIPVFEDNQGAIQIAHNPITNSNPKHIDVRHHFIRELVERKEI 243          
BLAST of mRNA_H-paniculata_contig47125.11728.1 vs. uniprot
Match: A0A6H5KRB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRB4_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 3.380e-37
Identity = 82/209 (39.23%), Postives = 124/209 (59.33%), Query Frame = 0
Query:    1 NDGPKTSE-EAEEMRA-FPYRGAVGALMWAATMRRPDIAHVVRTTKTFYENPGMEHTRAVGKILQYVLRTADLGITYGGKDCE-VEMLACANSDYATCQDSQRSVSGGAVLLGGEAVRWHARTQEMTAAETIEAEYVALVEMVNEVLFLRQVQAFIIPTLEHYSVIIKEDNQGAAKITHNKHSSRRTRHINVKHHNVHDAVEAGKVDIV 206
            + G K S+ +A+E+   FP+R  VG+LMW AT  RPDIA+ VR    +  +P + H  A   IL Y  RT+  GI++     E   +   A++D+A+    +RSVSGG V  GG AV W +RTQ+     T EAEYVAL ++V E+LFLRQ+  F +P +    + + ED QG  ++  N  S+  ++HINV+HH + + VE  ++ ++
Sbjct:   80 SSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFTLPQVGMPCIPVFEDIQGVIQLAQNPISNSNSKHINVRHHFLRELVERKEISVI 288          
BLAST of mRNA_H-paniculata_contig47125.11728.1 vs. uniprot
Match: A0A6H5L8D6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D6_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 3.840e-37
Identity = 84/209 (40.19%), Postives = 126/209 (60.29%), Query Frame = 0
Query:    1 NDGPKTSE-EAEEMRA-FPYRGAVGALMWAATMRRPDIAHVVRTTKTFYENPGMEHTRAVGKILQYVLRTADLGITYGGKDCE-VEMLACANSDYATCQDSQRSVSGGAVLLGGEAVRWHARTQEMTAAETIEAEYVALVEMVNEVLFLRQVQAFIIPTLEHYSVIIKEDNQGAAKITHNKHSSRRTRHINVKHHNVHDAVEAGKVDIV 206
            + G K S+ +A+E+   FP+   VG+LMW AT  RPDIA+ VRT   +  +P +    A   IL Y  RT+  GI++     E + +   A++D+AT    +RSVSGG V  GG AV W +RTQ+     T EAEYVAL ++V E+LFLRQ   F++P +    + I EDNQGA ++  N  S+  ++H++V+HH V + VE  ++ ++
Sbjct:  189 SSGVKLSDFDADEVTTDFPFHELVGSLMWLATQTRPDIANAVRTVARYCASPKLVPWNAAMDILGYARRTSQFGISFQRGTVEGLSLQGYADADFATKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQFWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHVDVRHHLVRELVERKEISVI 397          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47125.11728.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KP70_9PHAE9.520e-4142.21Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4G9_9PHAE2.310e-4042.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JEF2_9PHAE1.070e-3942.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KD60_9PHAE3.180e-3940.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHY5_9PHAE5.070e-3842.21Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5K8K2_9PHAE7.350e-3840.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFG2_9PHAE1.720e-3739.71Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JMV5_9PHAE2.720e-3740.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRB4_9PHAE3.380e-3739.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L8D6_9PHAE3.840e-3740.19Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 14..206
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 14..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig47125contigH-paniculata_contig47125:148..804 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig47125.11728.1mRNA_H-paniculata_contig47125.11728.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig47125 148..804 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig47125.11728.1 ID=prot_H-paniculata_contig47125.11728.1|Name=mRNA_H-paniculata_contig47125.11728.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=219bp
NDGPKTSEEAEEMRAFPYRGAVGALMWAATMRRPDIAHVVRTTKTFYENP
GMEHTRAVGKILQYVLRTADLGITYGGKDCEVEMLACANSDYATCQDSQR
SVSGGAVLLGGEAVRWHARTQEMTAAETIEAEYVALVEMVNEVLFLRQVQ
AFIIPTLEHYSVIIKEDNQGAAKITHNKHSSRRTRHINVKHHNVHDAVEA
GKVDIVMWGRKRSTRTYS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like