prot_H-paniculata_contig4702.11711.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4702.11711.1
Unique Nameprot_H-paniculata_contig4702.11711.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length136
Homology
BLAST of mRNA_H-paniculata_contig4702.11711.1 vs. uniprot
Match: UPI0006A737CF (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A737CF)

HSP 1 Score: 104 bits (260), Expect = 2.860e-24
Identity = 53/121 (43.80%), Postives = 75/121 (61.98%), Query Frame = 0
Query:   14 GFVHADGAEDVEDRKSTTGYVFKLNGGATSWCSMEQPLVTRFSIGGEYVAAGKRGMETVYFKGLLGSIVFGCRGSTTSFEDHKSAINFSKGVGAHCRTKHIGVRWHGIREWIREGVLALKY 134
            G+V +D A D +DRKST+G+ F   GGA SW S +QP+VT  +   EYVAA     + V+ + +L  I FG    T  F D+ SAI  SK +  H R+KHI VR+H +RE + EG+++ +Y
Sbjct:  190 GYVDSDYAGDEDDRKSTSGFTFMFGGGAVSWSSKKQPIVTLSTTEAEYVAAANGACQAVWMRNMLTEIGFGQGDGTVLFCDNSSAIKLSKNLVLHGRSKHIHVRFHFLRELVNEGIISTEY 310          
BLAST of mRNA_H-paniculata_contig4702.11711.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS)

HSP 1 Score: 104 bits (260), Expect = 4.380e-24
Identity = 55/129 (42.64%), Postives = 79/129 (61.24%), Query Frame = 0
Query:    6 KSNGHDVEGFVHADGAEDVEDRKSTTGYVFKLNGGATSWCSMEQPLVTRFSIGGEYVAAGKRGMETVYFKGLLGSIVFGCRGSTTSFEDHKSAINFSKGVGAHCRTKHIGVRWHGIREWIREGVLALKY 134
            +  G  + GFV +D A DV+DRKST+GYVF L GGA SW S +QP+VT  +   E+VAA     + ++ + +LG I +     TT F D+ S I  SK    H R+KHI VR++ +R+ + E V+ LK+
Sbjct:  214 QGEGEKLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKF 342          
BLAST of mRNA_H-paniculata_contig4702.11711.1 vs. uniprot
Match: Q9C7Y1_ARATH (Copia-type polyprotein, putative; 28768-32772 n=3 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9C7Y1_ARATH)

HSP 1 Score: 103 bits (258), Expect = 3.550e-23
Identity = 57/123 (46.34%), Postives = 77/123 (62.60%), Query Frame = 0
Query:   14 GFVHADGAEDVEDRKSTTGYVFKLNGGATSWCSMEQPLVTRFSIGGEYVAAGKRGMETVYFKGLLGSIVFGCR--GSTTSFEDHKSAINFSKGVGAHCRTKHIGVRWHGIREWIREGVLALKY 134
            GFV +D A DV+DRKST+GYVF L GGA +W S +QP+VT  +   E+V+A     + V+ + +L  I  GCR  G T  F D+ S I  SK    H R+KHI VR+H +RE ++EG + L Y
Sbjct: 1180 GFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEI--GCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDY 1300          
BLAST of mRNA_H-paniculata_contig4702.11711.1 vs. uniprot
Match: UPI00193C8901 (secreted RxLR effector protein 161-like n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193C8901)

HSP 1 Score: 97.1 bits (240), Expect = 2.830e-22
Identity = 52/125 (41.60%), Postives = 72/125 (57.60%), Query Frame = 0
Query:   11 DVEGFVHADGAEDVEDRKSTTGYVFKLNGGATSWCSMEQPLVTRFSIGGEYVAAGKRGMETVYFKGLLGSIVFGCRGSTTSFEDHKSAINFSKGVGAHCRTKHIGVRWHGIREWIREGVLALKYV 135
            ++EG+V AD AED+E R+STTGYVF L  GA +W +  Q +VT  +   EYVAA     E ++ + LL  +   C  +T  F D++S +   +    H RTKHI VR H IRE +  G +  K V
Sbjct:   58 EIEGYVDADFAEDLETRRSTTGYVFLLGNGAVTWTAQRQKMVTISTTEAEYVAAAAAAKEAIWLRRLLSGLERNCNRATKVFIDNQSTLRLVQNSEFHKRTKHIDVRCHFIREKVLSGKIDTKCV 182          
BLAST of mRNA_H-paniculata_contig4702.11711.1 vs. uniprot
Match: H3G557_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G557_PHYRM)

HSP 1 Score: 97.1 bits (240), Expect = 3.020e-22
Identity = 50/121 (41.32%), Postives = 72/121 (59.50%), Query Frame = 0
Query:   14 GFVHADGAEDVEDRKSTTGYVFKLNGGATSWCSMEQPLVTRFSIGGEYVAAGKRGMETVYFKGLLGSIVFGCRGSTTSFEDHKSAINFSKGVGAHCRTKHIGVRWHGIREWIREGVLALKY 134
            G+  A+ A D++ R+STTGYVF LNG A SW S  QP V   S   EY+A      E V+ + LL  +   C G+TT F+D++  I  +K    H RTKHI +++H +RE + + V+ L+Y
Sbjct:  102 GYADANWAGDLDSRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEY 222          
BLAST of mRNA_H-paniculata_contig4702.11711.1 vs. uniprot
Match: A0A6D2I006_9BRAS (Integrase catalytic domain-containing protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2I006_9BRAS)

HSP 1 Score: 100 bits (249), Expect = 5.560e-22
Identity = 53/121 (43.80%), Postives = 73/121 (60.33%), Query Frame = 0
Query:   14 GFVHADGAEDVEDRKSTTGYVFKLNGGATSWCSMEQPLVTRFSIGGEYVAAGKRGMETVYFKGLLGSIVFGCRGSTTSFEDHKSAINFSKGVGAHCRTKHIGVRWHGIREWIREGVLALKY 134
            GFV +D A D +DRKST+GYV+ L GGA  W S +QP+VT  +   E+VAA     + V+ + +L  I +     T  F D+ S I  SK    H R+KHI VR+H +RE + +GV+AL Y
Sbjct:  677 GFVDSDYAGDTDDRKSTSGYVYMLGGGAILWASKKQPIVTLSTTEAEFVAAAYGACQGVWLRNILEEIGYAQEEGTVLFCDNSSTIKLSKNPVLHGRSKHIHVRFHFLRELVNDGVIALDY 797          
BLAST of mRNA_H-paniculata_contig4702.11711.1 vs. uniprot
Match: A0A7D9DPP1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DPP1_PARCT)

HSP 1 Score: 100 bits (249), Expect = 5.770e-22
Identity = 54/132 (40.91%), Postives = 78/132 (59.09%), Query Frame = 0
Query:    5 DKSNGHDVEGFVHADGAEDVEDRKSTTGYVFKLNGGATSWCSMEQPLVTRFSIGGEYVAAGKRGMETVYFKGLLGSIVFGCRGS--TTSFEDHKSAINFSKGVGAHCRTKHIGVRWHGIREWIREGVLALKY 134
            D  NG ++ G+  A+ A DV+ R+ST+GYVFK+     SWCS +Q  VT+ +   EYVA  +   E ++ +GLL  I  GC+    TT +ED++ AI  SK    H RTKHI VR+H +RE +    + + Y
Sbjct: 1119 DDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRGLLSDI--GCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFHFVREKVLSNEVKVIY 1248          
BLAST of mRNA_H-paniculata_contig4702.11711.1 vs. uniprot
Match: A0A1J3D358_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3D358_NOCCA)

HSP 1 Score: 99.0 bits (245), Expect = 1.410e-21
Identity = 52/121 (42.98%), Postives = 74/121 (61.16%), Query Frame = 0
Query:   14 GFVHADGAEDVEDRKSTTGYVFKLNGGATSWCSMEQPLVTRFSIGGEYVAAGKRGMETVYFKGLLGSIVFGCRGSTTSFEDHKSAINFSKGVGAHCRTKHIGVRWHGIREWIREGVLALKY 134
            G+  +D A D++D KST+GYVF L+GGA +W S +QP+VT  S   EYVAA     + ++ K +LG I F      T F D+ S I  SK    H ++KHI VR+H +RE  +EG++ L +
Sbjct:  338 GYTDSDYAGDIDDCKSTSGYVFLLSGGAVAWSSRKQPIVTLSSTEAEYVAAATCACQAIWMKRVLGEIGFEQEDGMTLFCDNTSTIKLSKNAVMHGKSKHIRVRYHFLRELSKEGLVTLVH 458          
BLAST of mRNA_H-paniculata_contig4702.11711.1 vs. uniprot
Match: A0A8J6LF05_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6LF05_TENMO)

HSP 1 Score: 99.0 bits (245), Expect = 2.000e-21
Identity = 53/122 (43.44%), Postives = 71/122 (58.20%), Query Frame = 0
Query:   14 GFVHADGAEDVEDRKSTTGYVFKLNGGATSWCSMEQPLVTRFSIGGEYVAAGKRGMETVYFKGLLGSIVFGCRGSTTSFEDHKSAINFSKGVGAHCRTKHIGVRWHGIREWIREGVLALKYV 135
            G+  AD A D+E R+STTGY+F+L  G  +WCS  Q LVT  +   EYVAA     E ++ + LL  I   C  +T  F D++SAI   K    H RTKHI VR+H IRE +    + ++YV
Sbjct: 1164 GYSDADYANDIETRRSTTGYLFELTNGPVTWCSQRQKLVTLSTTESEYVAASVASREAIWLRKLLKDIRPQCEKATVIFVDNQSAIKLVKNPEFHKRTKHIDVRYHYIREKVNAKEIKVEYV 1285          
BLAST of mRNA_H-paniculata_contig4702.11711.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM)

HSP 1 Score: 96.7 bits (239), Expect = 2.010e-21
Identity = 50/121 (41.32%), Postives = 72/121 (59.50%), Query Frame = 0
Query:   14 GFVHADGAEDVEDRKSTTGYVFKLNGGATSWCSMEQPLVTRFSIGGEYVAAGKRGMETVYFKGLLGSIVFGCRGSTTSFEDHKSAINFSKGVGAHCRTKHIGVRWHGIREWIREGVLALKY 134
            G+  A+ A D++ R+STTGYVF LNG A SW S  QP V   S   EY+A      E V+ + LL  +   C G+TT F+D++  I  +K    H RTKHI +++H +RE + + V+ L+Y
Sbjct:  161 GYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTFFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEY 281          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4702.11711.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0006A737CF2.860e-2443.80uncharacterized mitochondrial protein AtMg00810-li... [more]
A0A6D2JBX5_9BRAS4.380e-2442.64Reverse transcriptase Ty1/copia-type domain-contai... [more]
Q9C7Y1_ARATH3.550e-2346.34Copia-type polyprotein, putative; 28768-32772 n=3 ... [more]
UPI00193C89012.830e-2241.60secreted RxLR effector protein 161-like n=1 Tax=So... [more]
H3G557_PHYRM3.020e-2241.32Uncharacterized protein n=3 Tax=Phytophthora ramor... [more]
A0A6D2I006_9BRAS5.560e-2243.80Integrase catalytic domain-containing protein n=2 ... [more]
A0A7D9DPP1_PARCT5.770e-2240.91Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A1J3D358_NOCCA1.410e-2142.98Retrovirus-related Pol polyprotein from transposon... [more]
A0A8J6LF05_TENMO2.000e-2143.44Uncharacterized protein n=1 Tax=Tenebrio molitor T... [more]
H3GB69_PHYRM2.010e-2141.32Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 8..128
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 8..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4702contigH-paniculata_contig4702:10371..10778 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4702.11711.1mRNA_H-paniculata_contig4702.11711.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4702 10371..12404 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4702.11711.1 ID=prot_H-paniculata_contig4702.11711.1|Name=mRNA_H-paniculata_contig4702.11711.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=136bp
MTLGDKSNGHDVEGFVHADGAEDVEDRKSTTGYVFKLNGGATSWCSMEQP
LVTRFSIGGEYVAAGKRGMETVYFKGLLGSIVFGCRGSTTSFEDHKSAIN
FSKGVGAHCRTKHIGVRWHGIREWIREGVLALKYV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like