mRNA_H-paniculata_contig4702.11711.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4702.11711.1 vs. uniprot
Match: A0A6A2WSU7_HIBSY (Integrase catalytic domain-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WSU7_HIBSY) HSP 1 Score: 202 bits (513), Expect = 2.540e-51 Identity = 151/483 (31.26%), Postives = 228/483 (47.20%), Query Frame = 1
Query: 1 CSAYEKGKMSKQPVNNYRKERTTESLELMHTDIAGPGD-KSFGGYRFDIIFVDDYSGFRSVSTLRQKSEAL*VLKQFERDVARANDLRIKRLRPDQRGEYAGKPFRRFCAENDIKQGFSTACTPQQNGMAERSWRSIFEMVRANMITANMGRRYWAEAVRSAVYSLNRAPTRPHNEGMPCEIWHDERPKLDHLRVFVRTAYVIFQLQQRRKLDDKA*AGVFLRYDEDSPRFCTQNPENKSVQLSRNVTFDEEDFITGHGGQLEHDGTRNMEEAVTRSRAQGEQGSVTNTEDRISASQMPPILPTHSLPAASVNPFNVLSDDXXXXXNRDSKKKDAEPFVQRPRDPSPTRXXXXXRENREEVPGATARMANVEGTGNFLETVSNGEPNSAAEVLKGPEAKNGARQ----------WR--RDGGGLKAIRTKCILKRKLKEDGSVACYIARPVVQSFSQVEGEEVLETSASVARMSTLRTFLAIS 1410
C A KGK +Q R R LE++HTDIAGP D S GG R+ + F+DD+S + L++KSEAL LK+F+ + + +K LR D+ GEY K F FC E+ I + TPQQNG+AER R+I +M R+ + + R +WAEAVR AVY LNR PT+ P E W ++P + H ++F AY R+KLDD+ +F+ YDE S + NP K + +SR+V FDE D+ + + +G + + G + N +++ P +LP++S S DA ++ P P PT RE R + NV + + N +P + E ++ + +N + W R G I K + K K+ ++G+V Y AR VV+ + Q +G + E A VAR+ T+R A++
Sbjct: 365 CEACIKGKQHRQSFKVGRSGRAQRLLEIVHTDIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLKEFKAMAEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHFKIFGCIAYAHVPEHTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADYWRWSEEEKKVEGLF----------FEDKDGDLINQDEQADDQD-----PRQNLPSSS------------------SSSSDASNIIEDPEAP-PTELQRSTRERRMPERYNDYELNNV----SLFCLLVNSDPITYEEAVEDDKWRNAMDEEIASIERNDTWELTRQPEGHNPIGVKWVYKTKINKEGNVEKYKARLVVKGYKQRQGIDYDEVFAPVARIETIRLLTAVA 809
BLAST of mRNA_H-paniculata_contig4702.11711.1 vs. uniprot
Match: A0A6S7GFZ2_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GFZ2_PARCT) HSP 1 Score: 188 bits (477), Expect = 5.500e-47 Identity = 140/478 (29.29%), Postives = 224/478 (46.86%), Query Frame = 1
Query: 1 CSAYEKGKMSKQPVNNYRKERTTESLELMHTDIAGP-GDKSFGGYRFDIIFVDDYSGFRSVSTLRQKSEAL*VLKQFERDVARANDLRIKRLRPDQRGEYAGKPFRRFCAENDIKQGFSTACTPQQNGMAERSWRSIFEMVRANMITANMGRRYWAEAVRSAVYSLNRAPTRPHNEGMPCEIWHDERPKLDHLRVFVRTAYVIFQLQQRRKLDDKA*AGVFLRYDEDSPRFCTQNPENKSVQLSRNVTFDEEDFITGHGGQLEHDGTRNMEEAVTRSRAQGEQGSVTN-----TEDRISASQMPPILPTHSLPAASVNPFNVLSDDXXXXXNRDSKKKDAEPFVQRPRDPSPTRXXXXXRENREEVPGATARMANVEGTGNFLETVSNGEPNSAAEVLKGPEAKNGARQWRRDGGGLKAIRTKCILKRKLKEDGSVACYIARPVVQSFSQVEGEEVLETSASVARMSTLRTFLAISRR 1416
C A + KM + PV RTT+ LEL+H+D+ GP S GG ++ + F DDY+ + +V L+ KSE +++ V L++K LR D GEY F ++C I +S TPQQNG++ER R++ E ++ + ANM +WAEAV +AVY NR+PT N P E+W ++P + +L+VF ++ RRKLD ++ VF+ Y D+ + + E+K+ S++V F E F HD +E + R E+ SV + ED++ +P I +LPA + N ++K++ P P + + T E + + A + E ++ N E++ PE G I +K ++K K DG+V + AR V Q +SQ G + E + VAR S++RT LA++ +
Sbjct: 161 CEACTRAKMHQIPVPKQSSNRTTQLLELIHSDVCGPMNTDSIGGSKYILTFTDDYTRYVTVYFLKNKSEVYEKFQEYVSMVENFTGLKVKTLRTDNGGEYVSNDFSKYCVNKGIVHQYSNPYTPQQNGVSERLNRTLMESAKSMIFHANMPINFWAEAVNTAVYLHNRSPTTSLNMKTPYELWFSKKPDVSNLKVFGSVCFIHIPSNLRRKLDPRSRKAVFIGYPLDTKGYKLYDIESKNFVQSKDVVFYENKF---------HDFKVVTKELIIREDVPEEKLSVDHEQHHDAEDQVPVPTVPDIEDKENLPAVGESYEESFM---KQVENLETKRQRKAPKKFSPDECNITESLTAENEKPQSISEALNDANASKWKQALKEEYNSLISNETWELVPPPE-------------GCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGIDYEEVFSPVARHSSIRTLLALANK 613
BLAST of mRNA_H-paniculata_contig4702.11711.1 vs. uniprot
Match: A0A7D9DPP1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DPP1_PARCT) HSP 1 Score: 189 bits (479), Expect = 6.390e-47 Identity = 140/478 (29.29%), Postives = 224/478 (46.86%), Query Frame = 1
Query: 1 CSAYEKGKMSKQPVNNYRKERTTESLELMHTDIAGP-GDKSFGGYRFDIIFVDDYSGFRSVSTLRQKSEAL*VLKQFERDVARANDLRIKRLRPDQRGEYAGKPFRRFCAENDIKQGFSTACTPQQNGMAERSWRSIFEMVRANMITANMGRRYWAEAVRSAVYSLNRAPTRPHNEGMPCEIWHDERPKLDHLRVFVRTAYVIFQLQQRRKLDDKA*AGVFLRYDEDSPRFCTQNPENKSVQLSRNVTFDEEDFITGHGGQLEHDGTRNMEEAVTRSRAQGEQGSVTN-----TEDRISASQMPPILPTHSLPAASVNPFNVLSDDXXXXXNRDSKKKDAEPFVQRPRDPSPTRXXXXXRENREEVPGATARMANVEGTGNFLETVSNGEPNSAAEVLKGPEAKNGARQWRRDGGGLKAIRTKCILKRKLKEDGSVACYIARPVVQSFSQVEGEEVLETSASVARMSTLRTFLAISRR 1416
C A + KM + PV RTT+ LEL+H+D+ GP S GG ++ + F DDY+ + +V L+ KSE +++ V L++K LR D GEY F ++C I +S TPQQNG++ER R++ E ++ + ANM +WAEAV +AVY NR+PT N P E+W ++P + +L+VF ++ RRKLD ++ VF+ Y D+ + + E+K+ S++V F E F HD +E + R E+ SV + ED++ +P I +LPA + N ++K++ P P + + T E + + A + E ++ N E++ PE G I +K ++K K DG+V + AR V Q +SQ G + E + VAR S++RT LA++ +
Sbjct: 409 CEACTRAKMHRIPVPKQSSNRTTQPLELIHSDVCGPMNTDSIGGSKYILTFTDDYTRYVTVYFLKNKSEVYEKFQEYVSMVENFTGLKVKTLRTDNGGEYVSNDFSKYCVNKGIVHQYSNPYTPQQNGVSERLNRTLMESAKSMIFHANMPINFWAEAVNTAVYLHNRSPTTSLNMKTPYELWFSKKPDVSNLKVFGSVCFIHIPSNLRRKLDPRSRKAVFIGYPLDTKGYKLYDIESKNFVRSKDVVFYENKF---------HDFKVVTKELIIREDVPEEKLSVDHEQHHDAEDQVPVPTVPDIEDEENLPAVGESYEESFM---KQVENLETKRQRKAPKKFSPDECNITESLTAENEEPQSISEALNGANASKWKQALKEEYNSLISNETWELVPPPE-------------GCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGIDYEEVFSPVARHSSIRTLLALANK 861
BLAST of mRNA_H-paniculata_contig4702.11711.1 vs. uniprot
Match: A0A6S7H8C9_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7H8C9_PARCT) HSP 1 Score: 185 bits (469), Expect = 5.990e-46 Identity = 139/478 (29.08%), Postives = 223/478 (46.65%), Query Frame = 1
Query: 1 CSAYEKGKMSKQPVNNYRKERTTESLELMHTDIAGP-GDKSFGGYRFDIIFVDDYSGFRSVSTLRQKSEAL*VLKQFERDVARANDLRIKRLRPDQRGEYAGKPFRRFCAENDIKQGFSTACTPQQNGMAERSWRSIFEMVRANMITANMGRRYWAEAVRSAVYSLNRAPTRPHNEGMPCEIWHDERPKLDHLRVFVRTAYVIFQLQQRRKLDDKA*AGVFLRYDEDSPRFCTQNPENKSVQLSRNVTFDEEDFITGHGGQLEHDGTRNMEEAVTRSRAQGEQGSVTN-----TEDRISASQMPPILPTHSLPAASVNPFNVLSDDXXXXXNRDSKKKDAEPFVQRPRDPSPTRXXXXXRENREEVPGATARMANVEGTGNFLETVSNGEPNSAAEVLKGPEAKNGARQWRRDGGGLKAIRTKCILKRKLKEDGSVACYIARPVVQSFSQVEGEEVLETSASVARMSTLRTFLAISRR 1416
C A + KM + PV RTT+ LEL+H+D+ GP S GG ++ + F DDY+ + +V L+ KSE +++ V L++K LR D GEY F ++C I +S TPQQNG++ER R++ E ++ + ANM +WAEAV +AVY NR+PT N P E+W ++P + +L+VF ++ RRKLD ++ VF+ Y ++ + + E+K+ S++V F E F HD +E + R E+ SV + ED++ +P I +LPA + N ++K++ P P + + T E + + A + E ++ N E++ PE G I +K ++K K DG+V + AR V Q +SQ G E + VAR S++RT LA++ +
Sbjct: 12 CEACTRAKMHRIPVPKQSSNRTTQPLELIHSDVCGPMNTDSIGGSKYILTFTDDYTRYVTVYFLKNKSEVYEKFQEYVSMVENFTGLKVKTLRTDNGGEYVSNDFSKYCVNKGIVHQYSNPYTPQQNGVSERLNRTLMESAKSMIFYANMPINFWAEAVNTAVYLHNRSPTTSLNMKTPYEVWFSKKPDVSNLKVFGSVCFIHTPSNLRRKLDPRSRKAVFIGYPLNTKGYKLYDIESKNFVRSKDVGFYENKF---------HDFKVVTKELIIREDVPEEKLSVDHEQHHDAEDQVPVPTVPDIEDEENLPAVGESYEESFM---KQVENLETKRQRKAPKKFSPDECNITESLTAENEEPQSISEALNGANASKWKQALKEEYNSLISNETWELVPPPE-------------GCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGINYEEVFSPVARHSSIRTLLALANK 464
BLAST of mRNA_H-paniculata_contig4702.11711.1 vs. uniprot
Match: A0A6A2WXP0_HIBSY (Phospholipase D n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WXP0_HIBSY) HSP 1 Score: 184 bits (467), Expect = 2.710e-45 Identity = 102/248 (41.13%), Postives = 143/248 (57.66%), Query Frame = 1
Query: 19 GKMSKQPVNNYRKERTTESLELMHTDIAGPGD-KSFGGYRFDIIFVDDYSGFRSVSTLRQKSEAL*VLKQFERDVARANDLRIKRLRPDQRGEYAGKPFRRFCAENDIKQGFSTACTPQQNGMAERSWRSIFEMVRANMITANMGRRYWAEAVRSAVYSLNRAPTRPHNEGMPCEIWHDERPKLDHLRVFVRTAYVIFQLQQRRKLDDKA*AGVFLRYDEDSPRFCTQNPENKSVQLSRNVTFDEEDF 759
GK +Q R R LE++HTDIAGP D S GG R+ + F+DD+S + L++KSEAL L++F+ + + +K LR D+ GEY K F FC E+ I + TPQQNG+AER R+I +M R+ + + R +WAEAVR AVY LNR PT+ P E W ++P + HL++F AY Q R+KLDD+ +F+ YDE S + NP K + +SR+V FDE D+
Sbjct: 1292 GKQHRQSFEVGRSWRARRPLEIVHTDIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLREFKAMSEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTGRYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADY 1539
BLAST of mRNA_H-paniculata_contig4702.11711.1 vs. uniprot
Match: A0A0N1ICY1_PAPMA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Papilio machaon TaxID=76193 RepID=A0A0N1ICY1_PAPMA) HSP 1 Score: 183 bits (465), Expect = 4.080e-45 Identity = 147/494 (29.76%), Postives = 227/494 (45.95%), Query Frame = 1
Query: 1 CSAYEKGKMSKQPVNNYRKERTTESLELMHTDIAGPGD-KSFGGYRFDIIFVDDYSGFRSVSTLRQKSEAL*VLKQFERDVARANDLRIKRLRPDQRGEYAGKPFRRFCAENDIKQGFSTACTPQQNGMAERSWRSIFEMVRANMITANMGRRYWAEAVRSAVYSLNRAPTRPHNEGMPCEIWHDERPKLDHLRVFVRTAYVIFQLQQRRKLDDKA*AGVFLRYDEDSPRFCTQNPENKSVQL-SRNVTFDEEDFITGHGGQLEHDGTRNMEEAVTRSRAQGEQGSVTNTEDRISASQMPPILPTHSLPAASVNPFNVLSDDXXXXXNRDSKKKDAEPFVQRPRDPSPTRXXXXXRENREEVPGATARMANVEGTGNFLETVSNGEPNSAAEVLKGPEAKNGARQWRRD-------------------GGGLKAIRTKCILKRKLKEDGSVACYIARPVVQSFSQVEGEEVLETSASVARMSTLRTFLAISRRL 1419
C A KGK S+ P R TE L L+H+D+ GP SF G ++ + F+DDY+ +R KSE L V K F++ V +L+IK LR D EY K F+ F E+ IK + +PQQNG+AER+ R+I E R + A + RR+WAEA+ +A+Y N++P++ P E W + L +LR F AY + ++R+KLD K +F+ Y +S + +PEN S + SR+V F LE +N+ + E +N +D S + PT + ++ N + + + D + + +Q+ D T V A A A NGEP + + L GP+A++ WR+ G KA++ K + K+KL +G + Y AR V + F+Q G + ET + V R ST+RT +A++ L
Sbjct: 462 CVACLKGKQSRLPFPKQSYTRATEKLGLIHSDLCGPMSVNSFSGAKYLLTFIDDYTRMTFGYFIRNKSEVLPVFKIFKKFVENQTNLKIKMLRTDNGREYVNKDFQLFLQEHGIKHQTTVPYSPQQNGVAERANRTIIEAGRCMLQEAGLDRRFWAEALNTAIYIKNKSPSKAVRGTTPEEKWSGNKVNLSNLRTFGCVAYAMIPNEKRKKLDAKCKQYIFVGYCSESKGYRLIDPENPSKCIKSRDVQF------------LEGKMYKNLVLNKGNKTSDCELNISSNEDDLNSNDINDQVNPTSVIESSDSNSADTSASGCSFIDDPDDVTWNPDMTLQQSSDSDDT------------VSIAVAMTA-----------CHNGEPQTIQDALSGPDAEH----WRKAIADEYKSFEKNKAWNLTLLPAGKKAVKCKWVFKKKLGSEGELLHYKARLVAKGFTQEYGIDYKETYSPVVRYSTIRTLIALAVNL 916
BLAST of mRNA_H-paniculata_contig4702.11711.1 vs. uniprot
Match: A0A0J7KG03_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KG03_LASNI) HSP 1 Score: 182 bits (462), Expect = 4.940e-45 Identity = 149/479 (31.11%), Postives = 221/479 (46.14%), Query Frame = 1
Query: 1 CSAYEKGKMSKQPVNNYRKERTTESLELMHTDIAGPGDK-SFGGYRFDIIFVDDYSGFRSVSTLRQKSEAL*VLKQFERDVARANDLRIKRLRPDQRGEYAGKPFRRFCAENDIKQGFSTACTPQQNGMAERSWRSIFEMVRANMITANMGRRYWAEAVRSAVYSLNRAPTRPHNEGMPCEIWHDERPKLDHLRVFVRTAYVIFQLQQRRKLDDKA*AGVFLRYDEDSPRFCTQNPENKSVQLSRNVTFDEEDFITGHGGQ-----LEHDGTRN--MEEAVTRSRAQGEQ-GSVTNTEDRISASQMPPILPTHSLPAASVNPFNVLSDDXXXXXNRDSKKKDAEPFVQRPRDPSPTRXXXXXRENREEVPGATARMANVEGTGNFLETVSNGEPNSAAEVLKGPEAKNGARQWRRDGGGLKAIRTKCILKRKLKEDGSVACYIARPVVQSFSQVEGEEVLETSASVARMSTLRTFLAIS 1410
C + KGK + P + + K R+ E L+++H+D+ GP +K S GG R+ + F+DDYS V L++KS+ +F+ V RIK LR D EY K F R+ ++ IK F+ TPQQNG+AER R+I E + + A + + YWAEAV +AVY NR+P MP E+W P L HL+ F AY + R+KLD K +F+ Y EDS F +PE K V SR+V F E G Q LE DG +N E V R R + ++ S ++E S+ + + T L ++ P + DD + D E N EE ++ + ++ A E + AKNG +A+ TK + K K G + Y AR VV+ SQ+EG + ET + V R ++++ A++
Sbjct: 288 CVSCIKGKQHRYPFS-HSKTRSREILQMVHSDVCGPMEKTSIGGSRYFLTFIDDYSKKTFVFFLKEKSQVKETFVEFKTLVENQTGKRIKILRTDNGREYVNKEFERYMKKSGIKHQFTITYTPQQNGVAERENRTIIEKAKNMLFEAELPKIYWAEAVATAVYLTNRSPNSSIGNKMPEELWSGSTPSLTHLKTFGCRAYAHVPKELRQKLDPKGEELLFVGYCEDSKGFRLMDPETKKVTRSRDVIFLENHKYGNDGNQHVIQLLEDDGPQNELAENGVEREREENKEIDSEMSSEYSKSSDSVKNVDETAPLRRSARPPKPIKRDDYITYLTLSNDVTDPE--------------------NLEEALNSSDSVTWIK----------------AMEEERDFLAKNGTWTLVDLPKDKRALDTKWVFKTKRDVTGQIKRYKARLVVRGCSQIEGIDYNETYSPVVRYTSIQFLCALA 729
BLAST of mRNA_H-paniculata_contig4702.11711.1 vs. uniprot
Match: A0A2G2VUS6_CAPBA (Integrase catalytic domain-containing protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2VUS6_CAPBA) HSP 1 Score: 181 bits (460), Expect = 1.870e-44 Identity = 101/254 (39.76%), Postives = 145/254 (57.09%), Query Frame = 1
Query: 1 CSAYEKGKMSKQPVNNYRKERTTESLELMHTDIAGPGD-KSFGGYRFDIIFVDDYSGFRSVSTLRQKSEAL*VLKQFERDVARANDLRIKRLRPDQRGEYAGKPFRRFCAENDIKQGFSTACTPQQNGMAERSWRSIFEMVRANMITANMGRRYWAEAVRSAVYSLNRAPTRPHNEGMPCEIWHDERPKLDHLRVFVRTAYVIFQLQQRRKLDDKA*AGVFLRYDEDSPRFCTQNPENKSVQLSRNVTFDEEDF 759
C A KGK +Q + R + LE++H+D+AGP D S GG R+ + F+DD+S V L++KSE L K+F+ V + + +K LR D+ GEY F F E+ I + TPQQNG+AER R+I ++ R+ + ++ R +WAEAVR AVY LNR PT+ P E W ++P + HL++F AY Q R+KLDD+ +F+ YDE S + NP K V +SR+V FDE D+
Sbjct: 818 CEACIKGKQHRQSFEVGKSRRARKPLEIVHSDLAGPFDIPSLGGNRYYLTFIDDFSRRSWVYILKEKSETLDKFKEFKAMVEKQSGYYVKILRSDRGGEYTANLFEDFVKEHGIIHQLTVRYTPQQNGVAERKNRTILDLARSMVKGKHLPRNFWAEAVRCAVYLLNRCPTKSVRYMTPNEAWSGQKPGVGHLKIFGCIAYSHVPEQLRKKLDDRGEKCIFIGYDERSKAYRFYNPLTKKVIISRDVEFDEADY 1071
BLAST of mRNA_H-paniculata_contig4702.11711.1 vs. uniprot
Match: A0A6D2JZV9_9BRAS (Integrase catalytic domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JZV9_9BRAS) HSP 1 Score: 179 bits (454), Expect = 4.420e-44 Identity = 140/484 (28.93%), Postives = 220/484 (45.45%), Query Frame = 1
Query: 1 CSAYEKGKMSKQPVNNYRKERTTESLELMHTDIAGPG-DKSFGGYRFDIIFVDDYSGFRSVSTLRQKSEAL*VLKQFERDVARANDLRIKRLRPDQRGEYAGKPFRRFCAENDIKQGFSTACTPQQNGMAERSWRSIFEMVRANMITANMGRRYWAEAVRSAVYSLNRAPTRPHNEGMPCEIWHDERPKLDHLRVFVRTAYVIFQLQQRRKLDDKA*AGVFLRYDEDSPRFCTQNPENKSVQLSRNVTFDEEDFITGHGGQL-EHDGTRNMEE-----------AVTRSRAQGEQGSVTNTEDRISASQMPPILPTHSLPAASVNPFNVLSDDXXXXXNRDSKKKDAEPFVQRPRDPSPTRXXXXXRENREEVPGATARMANV-EGTGNFLETVSNGEPNSAAEVLKGPEAKNGARQWRRDGGGLKAIRTKCILKRKLKEDGSVACYIARPVVQSFSQVEGEEVLETSASVARMSTLRTFLAIS 1410
C + GK + P +N R LE +H+D+ GP S+ G+R+ ++FVDDYS + V +++KSE ++F+ V +IK LR D GE+ F FC ++ IK+ FS TPQQNG+AER R + E R+ + N+ + WAE +R A Y +NR P P+N P E+ H ++P + HLR+F YV QR KL+ KA +F+ YDE + +PE +SR+V FDE G L E DG ++++ ++ QGE+GS E+ +D N+ K+ +P R T EE P + V E E + + N +++ P+ ++ + K + + K K DG++ + AR V + FSQ GE+ ET + VA+M+T+RT L+++
Sbjct: 162 CEGCQYGKSHRLPFDNSTS-RCNAPLERIHSDLMGPTRTSSYSGFRYMLLFVDDYSRYTWVYFVKEKSEVFSKFQEFKVTVEGELGRKIKTLRTDNGGEFMSNEFLSFCRKHGIKREFSCPYTPQQNGVAERKIRHLSETCRSWLHAKNLPKALWAEGMRCAAYVINRMPLSPNNMKSPYEMVHGKKPTVKHLRIFGSICYVHVFDSQRTKLEAKAKKCIFVGYDEQRKGWRCMDPETHRYTVSRDVVFDEVSSYYGSPQVLVEQDGAGSLKDDEPAAQIPSDGGISEPEMQGERGSTNQEEEE--------------------------EEDHGSLANQRPKRDIVKPARYRDERFVTTYSCYFASPFDEEEPSSYDEAKGVKEWETAMKEEMDALKKNETWDLVPKPK-------------DVQPVSCKWVYRIKRKRDGNIDRHKARLVARGFSQKYGEDYDETFSPVAKMTTVRTLLSLA 605
BLAST of mRNA_H-paniculata_contig4702.11711.1 vs. uniprot
Match: A0A3S3RF48_9ACAR (Retrovirus-related Pol polyprotein from transposon TNT 1-94-like protein (Fragment) n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S3RF48_9ACAR) HSP 1 Score: 174 bits (442), Expect = 4.570e-44 Identity = 98/251 (39.04%), Postives = 137/251 (54.58%), Query Frame = 1
Query: 1 CSAYEKGKMSKQPVNNYRKERTTESLELMHTDIAGPGD-KSFGGYRFDIIFVDDYSGFRSVSTLRQKSEAL*VLKQFERDVARANDLRIKRLRPDQRGEYAGKPFRRFCAENDIKQGFSTACTPQQNGMAERSWRSIFEMVRANMITANMGRRYWAEAVRSAVYSLNRAPTRPHNEGMPCEIWHDERPKLDHLRVFVRTAYVIFQLQQRRKLDDKA*AGVFLRYDEDSPRFCTQNPENKSVQLSRNVTFDE 750
C KGKMS++P N R+T++L+L+HTD+ GP K+F G R+ + F+DDYS F L KSE + E V RIK LR D+ EY K F FC I Q F+ + TPQQNG+AER R+I E R + A + +YW EAV++AVY NR+ T+ P E W ++P L +LRVF AY +++R+KLD + +FL Y E + Q + + +SR+V F E
Sbjct: 151 CEGCAKGKMSRRPFPNTSTNRSTKTLQLVHTDVCGPMQTKTFSGKRYFLTFIDDYSRFTVCYLLEHKSEVYDKFVECEALVTNMTSNRIKMLRSDEGCEYRSKKFNAFCKGKGIIQQFTASYTPQQNGVAERMNRTIVEAARCMLQAAQLDNKYWDEAVQTAVYLQNRSSTKALTNITPYEAWFGKKPDLSNLRVFGCQAYAHILIEKRQKLDANSTKCIFLGYSESIKAYRLQEVKTGKLVISRDVIFSE 401 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4702.11711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4702.11711.1 >prot_H-paniculata_contig4702.11711.1 ID=prot_H-paniculata_contig4702.11711.1|Name=mRNA_H-paniculata_contig4702.11711.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=136bp MTLGDKSNGHDVEGFVHADGAEDVEDRKSTTGYVFKLNGGATSWCSMEQPback to top mRNA from alignment at H-paniculata_contig4702:10371..12404- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4702.11711.1 ID=mRNA_H-paniculata_contig4702.11711.1|Name=mRNA_H-paniculata_contig4702.11711.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2034bp|location=Sequence derived from alignment at H-paniculata_contig4702:10371..12404- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4702:10371..12404- >mRNA_H-paniculata_contig4702.11711.1 ID=mRNA_H-paniculata_contig4702.11711.1|Name=mRNA_H-paniculata_contig4702.11711.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=816bp|location=Sequence derived from alignment at H-paniculata_contig4702:10371..12404- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |