prot_H-paniculata_contig47.11701.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig47.11701.1
Unique Nameprot_H-paniculata_contig47.11701.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length236
Homology
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BLAST of mRNA_H-paniculata_contig47.11701.1 vs. uniprot
Match: A0A6H5JQC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQC7_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 1.990e-71
Identity = 151/266 (56.77%), Postives = 170/266 (63.91%), Query Frame = 0 
Query:    2 AVCGVGFDVVVTTTIRELVPDTPPCTRLNVGGLTQEEARCLLRRCSGLDAQATLPPSADGVVKACGALALSLAIAGSLPAVRCRSDEAAWANLHSILSHKASRLGE-------HRRGNSTGS------------------GASSMAGKTGTGSQWGGSVRSGVSGGNSIPGSGGRGERSSSLSDREREIDAS------PWVSAVLWASLHALPKGHADQYLALVALPACLRGAPAATPSAAGVRGSGGGANVEHLAALWGVPGTGG 236
            A    GFD+VVTT  R+LVPD+P CTRL+VGGL ++EAR LLRRCSGL  QA LPPSADGV+KACGALAL L IAGSLPAVRCRSDEAAWANL+SILSHKA+RLGE       HRRG S  S                  G S +    G    W  +       G +  G G  G   S  S     +         PWV AVLWASLHALP+G+ADQYLAL ALP+CLRGAPA TP A GVRG+ GGA + HL ALWG+PG GG
Sbjct:  692 AASAAGFDLVVTTAFRDLVPDSPLCTRLDVGGLARDEARSLLRRCSGLAWQAPLPPSADGVIKACGALALPLTIAGSLPAVRCRSDEAAWANLYSILSHKATRLGESSTCSENHRRGRSNASTPSSXXXXXXXXXXXGTAGGSFLGAFAGGAGAWINATAXXXGSGLAPHGRGAGGHDGSGRSYSGGFVAGXXXXXXXPWVGAVLWASLHALPQGNADQYLALAALPSCLRGAPAVTPLAGGVRGAAGGAGIGHLRALWGIPGVGG 957
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BLAST of mRNA_H-paniculata_contig47.11701.1 vs. uniprot
Match: D8LCK2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK2_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 4.770e-43
Identity = 88/119 (73.95%), Postives = 97/119 (81.51%), Query Frame = 0 
Query:    2 AVCGVGFDVVVTTTIRELVPDTPPCTRLNVGGLTQEEARCLLRRCSGLDAQATLPPSADGVVKACGALALSLAIAGSLPAVRCRSDEAAWANLHSILSHKASRLGE-------HRRGNS 113
            A    GFD+VVTT  R+LVPD+P CTRL+VGGL ++EAR LLRRCSGL  QA LPPSADGV+KACGALAL L IAGSLPAVRCRSDEAAWANL+SILSHKA+RLGE       HRRG S
Sbjct:  776 AASAAGFDLVVTTAFRDLVPDSPLCTRLDVGGLARDEARSLLRRCSGLAWQAPLPPSADGVIKACGALALPLTIAGSLPAVRCRSDEAAWANLYSILSHKATRLGESSSCSENHRRGRS 894
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47.11701.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JQC7_9PHAE1.990e-7156.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCK2_ECTSI4.770e-4373.95Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig47contigH-paniculata_contig47:44065..48180 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig47.11701.1mRNA_H-paniculata_contig47.11701.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig47 44065..48181 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig47.11701.1 ID=prot_H-paniculata_contig47.11701.1|Name=mRNA_H-paniculata_contig47.11701.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=236bp
GAVCGVGFDVVVTTTIRELVPDTPPCTRLNVGGLTQEEARCLLRRCSGLD
AQATLPPSADGVVKACGALALSLAIAGSLPAVRCRSDEAAWANLHSILSH
KASRLGEHRRGNSTGSGASSMAGKTGTGSQWGGSVRSGVSGGNSIPGSGG
RGERSSSLSDREREIDASPWVSAVLWASLHALPKGHADQYLALVALPACL
RGAPAATPSAAGVRGSGGGANVEHLAALWGVPGTGG
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