mRNA_H-paniculata_contig4696.11688.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4696.11688.1
Unique NamemRNA_H-paniculata_contig4696.11688.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig4696.11688.1 vs. uniprot
Match: A0A835Z9D0_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9D0_9STRA)

HSP 1 Score: 263 bits (672), Expect = 6.570e-78
Identity = 137/280 (48.93%), Postives = 182/280 (65.00%), Query Frame = 3 
Query:  741 DSVFAVYKPKGWTSAGVVAKIKFVLRNGLRDDIRANESPPSKTANLEEQTIQAGGTSEAAEGKETNKLNKXXXXXXXXERPRTPKVKVGHGGTLDPMAAGVLVIGVGKGCRELTNFLSGSKAYRAEALLGCETDTQDAEGEETIRGPWEHVTNEDIDSALGEFTGHIMQMPPMFSALRKDGKRLYELARQGKTVEREARPVMVYSLKQTDPRPALPRVGLDIECGGGFYVRTLIHDLGRTLGSRGHMTALERTKQGPFELRDTLPLEDWNFDGLVEHIAK 1580
            D + AV+KP GWTS+ VV K++  L+ G R  I   ++  ++TAN       AGG +    G +              +R +  K+KVGHGGTLDPMA GVLV+G+G G +EL  +L G+K Y A  +LG ETDT D+EG+ET    W HVT + +  AL +F G IMQ+PPM+SALRKDGKRL+ELARQGK VER+ARPV +Y L+      ALP   L+++C GG Y+RTLI D+ R LG+RGHMT+L RTKQGPF L   L  + W+F+ ++ H+ K
Sbjct:    3 DGLMAVHKPAGWTSSDVVTKVRNELQRGFRRAIEEEQATLTETANA------AGGPASGHAGAQ--------------QRNKRVKIKVGHGGTLDPMATGVLVLGIGSGTKELEKYLQGAKGYSAVGILGSETDTLDSEGQETEAMEWSHVTRDALMQALEQFRGDIMQVPPMYSALRKDGKRLHELARQGKVVERDARPVTIYQLEAPAEGVALPSFALNVQCSGGTYIRTLIADIARALGTRGHMTSLVRTKQGPFGLEHCLDQQHWHFEQILAHLDK 262
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BLAST of mRNA_H-paniculata_contig4696.11688.1 vs. uniprot
Match: A0A6H5KMC7_9PHAE (tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMC7_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 1.300e-69
Identity = 117/165 (70.91%), Postives = 134/165 (81.21%), Query Frame = 3 
Query: 1089 LSGSKAYRAEALLGCETDTQDAEGEETIRGPWEHVTNEDIDSALGEFTGHIMQMPPMFSALRKDGKRLYELARQGKTVEREARPVMVYSLKQTDPRPALPRVGLDIECGGGFYVRTLIHDLGRTLGSRGHMTALERTKQGPFELRDTLPLEDWNFDGLVEHIAKA 1583
            + G K YRAEALLG ET+TQDA GE T+ G WEHVT EDID+ALG+FTG IMQ+PPMFSAL KDG+RLYELAR+G TVEREAR V V SL+Q DP   LP +GL++ECGGGFYVRTLI DLGR LG+R HMTALERTKQGPFELR  L LE+W +D L +H+  A
Sbjct:   31 IKGGKGYRAEALLGHETNTQDALGEATVHGEWEHVTKEDIDAALGQFTGDIMQVPPMFSALHKDGQRLYELARKGITVEREARQVRVDSLRQADPALPLPLLGLELECGGGFYVRTLIEDLGRALGTRAHMTALERTKQGPFELRHALRLEEWEYDRLCKHLGDA 195
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BLAST of mRNA_H-paniculata_contig4696.11688.1 vs. uniprot
Match: F0YN09_AURAN (tRNA pseudouridine(55) synthase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN09_AURAN)

HSP 1 Score: 226 bits (577), Expect = 8.900e-65
Identity = 135/285 (47.37%), Postives = 163/285 (57.19%), Query Frame = 3 
Query:  747 VFAVYKPKGWTSAGVVAKIKFVLRNGLRDDIRANESPPSKTANLEEQTIQAGGTSEAAEGKETNKLNKXXXXXXXXERPRTPKVKVGHGGTLDPMAAGVLVIGVGKGCRELTNFLSGSKAYRAEALLGCETDTQDAEGEETIRGPWEHVTNEDIDSALGEFTGHIMQMPPMFSALRKDGKRLYELARQGKTVEREARPVMVYSLKQTDPRPA-------LPRVGLDIECGGGFYVRTLIHDLGR--TLGSRGHMTALERTKQGPFELRDTLPLEDWNFDGLVEHI 1574
            V AVYKP GW+SA VVAK++ VL        RA + P  K                                          KVKVGHGGTLDP+A GVLV+GVG+GCRE+  +L G+K YRA A LG ETDT DAEG      P++HVT + +++AL  FTG I Q PPM+SAL  +GKRLYELAR+G  VERE+RPV +  L   D           LP  GLD+EC GG Y+RTLI DL R   + S  HM  LERTKQGPFEL D L   DW+FD + +H+
Sbjct:    2 VCAVYKPPGWSSANVVAKLRGVLE-------RAIKIPGQKKF----------------------------------------KVKVGHGGTLDPLARGVLVVGVGRGCREMQGYLKGAKRYRAVAELGKETDTLDAEGAVVEEAPFDHVTLDALEAALPAFTGDIRQTPPMYSALHHEGKRLYELAREGIEVERESRPVTISRLALDDRGVGAVAGPLGLPHFGLDVECSGGTYIRTLISDLARHEAVKSVAHMVELERTKQGPFELGDCLHEADWDFDAICQHL 239
[Close]
BLAST of mRNA_H-paniculata_contig4696.11688.1 vs. uniprot
Match: A0A7S2MBG8_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MBG8_9STRA)

HSP 1 Score: 224 bits (572), Expect = 1.010e-62
Identity = 134/325 (41.23%), Postives = 170/325 (52.31%), Query Frame = 3 
Query:  741 DSVFAVYKPKGWTSAGVVAKIKFVLRNGLRDDIRANESPPSKTANLEEQTIQAGGTSEAAEGKETNKLNKXXXXXXXXERPRTPKVKVGHGGTLDPMAAGVLVIGVGKGCRELTNFLSGSKAYRAEALLGCETDTQDAEGEETIRGPWEHVTNEDIDSALGEFTGHIMQMPPMFSALRKDGKRLYELARQGKTVEREARPVMVYSLK------------------------------------QTDPRPA----LPRVGLDIECGGGFYVRTLIHDLGRTLGSRGHMTALERTKQGPFELRDTLPLEDWNFDGLVEHIAKARKMM 1595
            D + AVYKP+ WTSA VVAK++  L+  LR                     + GG                             KVKVGHGGTLDP+A GVLV+G+GKGCR+LT++L+G+K YRA   LG +TDT D+ GE     PW+HVT+  +  AL  F G I+Q+PPMFSA RKDGKRLY+LAR+GK VEREAR V V SL                                        P P     LP   LD+ECGGG Y+R++I DLG  + S  HMT LERT+QGPFEL D L    W+F+ +  H  +  +++
Sbjct:   47 DGLVAVYKPQTWTSADVVAKVRSTLQRELRH--------------------RTGGR---------------------------VKVKVGHGGTLDPLATGVLVLGIGKGCRQLTDYLAGAKRYRAVGKLGMKTDTLDSLGEAVAEKPWDHVTDAQLSDALEAFRGEILQIPPMFSAKRKDGKRLYDLAREGKVVEREARAVTVTSLSLLQEHDDWLRAGALTRGGNDGSSQVGLAVNARLEVADAPPCPPSFMDLPSFALDVECGGGTYIRSIIDDLGDAVDSCAHMTWLERTRQGPFELDDCLAEAHWSFEEICAHTVRCTQLL 324
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BLAST of mRNA_H-paniculata_contig4696.11688.1 vs. uniprot
Match: A0A7S2WB30_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WB30_9STRA)

HSP 1 Score: 219 bits (559), Expect = 3.310e-61
Identity = 135/315 (42.86%), Postives = 168/315 (53.33%), Query Frame = 3 
Query:  747 VFAVYKPKGWTSAGVVAKIKFVLRNGLRDDIRANESPPSKTANLEEQTIQAGGTSEAAEGKETNKLNKXXXXXXXXERPRTPKVKVGHGGTLDPMAAGVLVIGVGKGCRELTNFLSGSKAYRAEALLGCETDTQDAEGEETIRGPWEHVTNEDIDSALGEFTGHIMQMPPMFSALRKDGKRLYELARQGKTVEREARPVMVYSLKQ-----------------------------------TDPRPAL--PRVGLDIECGGGFYVRTLIHDLGR--TLGSRGHMTALERTKQGPFELRDTLPLEDWNFDGLVEHI 1574
            + AVYKP+G+TS+  VAK++ VL+  +R+ +                                                R  KVKVGHGGTLDP+A GVLV+GVG GC++LT++LSGSK YRA   LG ET+T D EG+     P +HVT E +  AL +F G I Q+PPMFSAL KDGKRLYELARQG TVERE+RPV ++ L                                     +DP  AL  P   LD+EC GG Y+R+LI DL R  ++ S  HMT LERTKQGPF L   LPL  W FDG+  H+
Sbjct:   33 LLAVYKPRGFTSSDAVAKVRSVLQRHMREAVG-----------------------------------------------RRVKVKVGHGGTLDPLATGVLVLGVGGGCKQLTDYLSGSKRYRALGRLGAETETLDTEGKVVEECPADHVTPEALLGALPDFRGDIEQVPPMFSALHKDGKRLYELARQGITVERESRPVTIHHLDLLQGPTEWAAALPTAAGTARVGHGLGDDDICAPVPFSDPGAALALPDFALDVECSGGTYIRSLISDLARHHSVQSCAHMTLLERTKQGPFTLDHCLPLSQWTFDGICTHV 300
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BLAST of mRNA_H-paniculata_contig4696.11688.1 vs. uniprot
Match: A0A8J2SXF4_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SXF4_9STRA)

HSP 1 Score: 213 bits (543), Expect = 2.720e-59
Identity = 128/294 (43.54%), Postives = 160/294 (54.42%), Query Frame = 3 
Query:  741 DSVFAVYKPKGWTSAGVVAKIKFVLRNGLRDDIRANESPPSKTANLEEQTIQAGGTSEAAEGKETNKLNKXXXXXXXXERPRTPKVKVGHGGTLDPMAAGVLVIGVGKGCRELTNFLSGSKAYRAEALLGCETDTQDAEGEETIRGPWEHVTNEDIDSALGEFTGHIMQMPPMFSALRKDGKRLYELARQGKTVEREARPVMVYSLKQTDPRP--------ALPRVGLDIECGGGFYVRTLIHDLGRTLGSRGHMTALERTKQGPFELRDTLPLEDW-NFDGLVEHIAKARKMM 1595
            D V  VYKP GWTS+ VV+KI+  L   +R                                                +  +  KVKVGHGGTLDP A G LVIGVG GCR + ++L G K Y A   LG  TDT D+EG  T   P++  T + +++ L +FTG I+Q+PPM+SAL KDGKRLY+LARQG  VEREAR V V  L+  D R         +LP  GLD+EC GG Y+RTLI DL R  GS GHM  LERT+QGPF L   L  E W +FD +  H+  +R ++
Sbjct:   40 DGVCCVYKPPGWTSSNVVSKIRGTLERAIR-----------------------------------------------IKGEKRQKVKVGHGGTLDPNARGCLVIGVGTGCRLMQSYLKGGKEYFAIGKLGEATDTLDSEGNVTSTQPYDDSTLQRMEALLPQFTGDILQIPPMYSALHKDGKRLYDLARQGLEVEREARQVSVSRLRMVDDRGVGSHEAPLSLPFFGLDVECSGGTYIRTLIDDLAREAGSCGHMVELERTRQGPFGLEHCLGDEAWGDFDAVCAHVEASRAIV 286
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BLAST of mRNA_H-paniculata_contig4696.11688.1 vs. uniprot
Match: A0A803J5Q4_XENTR (tRNA pseudouridine(55) synthase n=3 Tax=Xenopus TaxID=8353 RepID=A0A803J5Q4_XENTR)

HSP 1 Score: 206 bits (524), Expect = 8.250e-57
Identity = 132/303 (43.56%), Postives = 169/303 (55.78%), Query Frame = 3 
Query:  738 LDSVFAVYKPKGWTSAGVVAKIKFVLRNGLRDDIRANESPPSKTANLEEQTIQAGGTSEAAEGKETNKLNKXXXXXXXXERPRTPKVKVGHGGTLDPMAAGVLVIGVGKGCRELTNFLSGSKAYRAEALLGCETDTQDAEGEETIRGPWEHVTNEDIDSALGEFTGHIMQMPPMFSALRKDGKRLYELARQGKTVE-REARPVMVYSLKQTDPRPALPRVGLDIECGGGFYVRTLIHDLGRTLGSRGHMTALERTKQGPFELRD-TLPLEDWNFDGLVEHIAKARKMMPVPPLGNSTAIKEDA 1640
            L  +F VYKPKG TSA VVA++K  L                K A L+E                               + R   +K+GHGGTLD  A+GVLVIG+G G + L+  L+GSK Y     LG  TDT DA G  T   P++H+T ED++ AL  FTG+IMQ+PP+FSAL++DGKRL  L R G  VE + ARPV VY L   D +P  P   LD+ECGGGFYVR+L++DLG+ L S   +  L RTKQGPF L D TL  EDWN   + + + +   ++P  P GN    KE+A
Sbjct:   12 LSGLFPVYKPKGPTSAQVVAQLKGSLL---------------KEAGLKEYV-----------------------------KKRKQTLKIGHGGTLDSSASGVLVIGIGDGTKMLSTMLAGSKKYTTVGELGKATDTLDASGTVTEEKPYDHITKEDLEGALKLFTGNIMQVPPLFSALKRDGKRLSCLLRDGAEVEAKPARPVTVYQLSLRDFQP--PVFTLDVECGGGFYVRSLVNDLGKALKSCASVKELVRTKQGPFTLEDHTLKEEDWNISRIAQALQEYGPLLPAEP-GNKRLKKENA 267
[Close]
BLAST of mRNA_H-paniculata_contig4696.11688.1 vs. uniprot
Match: F7E5E4_XENTR (tRNA pseudouridine(55) synthase n=2 Tax=Xenopus tropicalis TaxID=8364 RepID=F7E5E4_XENTR)

HSP 1 Score: 204 bits (520), Expect = 1.190e-55
Identity = 131/302 (43.38%), Postives = 168/302 (55.63%), Query Frame = 3 
Query:  738 LDSVFAVYKPKGWTSAGVVAKIKFVLRNGLRDDIRANESPPSKTANLEEQTIQAGGTSEAAEGKETNKLNKXXXXXXXXERPRTPKVKVGHGGTLDPMAAGVLVIGVGKGCRELTNFLSGSKAYRAEALLGCETDTQDAEGEETIRGPWEHVTNEDIDSALGEFTGHIMQMPPMFSALRKDGKRLYELARQGKTVE-REARPVMVYSLKQTDPRPALPRVGLDIECGGGFYVRTLIHDLGRTLGSRGHMTALERTKQGPFELRD-TLPLEDWNFDGLVEHIAKARKMMPVPPLGNSTAIKED 1637
            L  +F VYKPKG TSA VVA++K  L                K A L+E                               + R   +K+GHGGTLD  A+GVLVIG+G G + L+  L+GSK Y     LG  TDT DA G  T   P++H+T ED++ AL  FTG+IMQ+PP+FSAL++DGKRL  L R G  VE + ARPV VY L   D +P  P   LD+ECGGGFYVR+L++DLG+ L S   +  L RTKQGPF L D TL  EDWN   + + + +   ++P  P GN    KE+
Sbjct:   56 LSGLFPVYKPKGPTSAQVVAQLKGSLL---------------KEAGLKEYV-----------------------------KKRKQTLKIGHGGTLDSSASGVLVIGIGDGTKMLSTMLAGSKKYTTVGELGKATDTLDASGTVTEEKPYDHITKEDLEGALKLFTGNIMQVPPLFSALKRDGKRLSCLLRDGAEVEAKPARPVTVYQLSLRDFQP--PVFTLDVECGGGFYVRSLVNDLGKALKSCASVKELVRTKQGPFTLEDHTLKEEDWNISRIAQALQEYGPLLPAEP-GNKRLKKEN 310
[Close]
BLAST of mRNA_H-paniculata_contig4696.11688.1 vs. uniprot
Match: W7TZ56_9STRA (tRNA pseudouridine(55) synthase n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZ56_9STRA)

HSP 1 Score: 205 bits (522), Expect = 1.540e-55
Identity = 125/295 (42.37%), Postives = 163/295 (55.25%), Query Frame = 3 
Query:  735 HLDSVFAVYKPKGWTSAGVVAKIKFVLRNGLRDDIRANESPPSKTANLEEQTIQAGGTSEAAEGKETNKLNKXXXXXXXXERPRTPKVKVGHGGTLDPMAAGVLVIGVGKGCRELTNFLSGSKAYRAEALLGCETDTQDAEGEETIRGPWEHVTNEDIDSALGEFTGHIMQMPPMFSALRKDGKRLYELARQGKTVEREARPV------MVYSLKQTDPRPALPRVGLDIECGGGFYVRTLIHDLGRTLGSRGHMTALERTKQGPFELRDTLPLEDWNFDG--LVEHIAKARKMM 1595
            +++ + A++KP+ WTS  VV K++ +L    R           + A ++                                     KVKVGHGGTLDPMA GVLV+GVG+GC++L  +L GSKAYRA  LLG E DT DA G  T      HVT + ++ AL  F G IMQ PP++SALR+ GKRLYELARQG+ VE E R V      ++++  +T  R   P  GL IEC GG YVR+LI D+ R++ +R HMTAL RTK GP  L D LP E W  D   +V+H+   R  M
Sbjct:   98 NMNGLVAIFKPRNWTSNDVVQKVRSLLEKEAR-----------RRAGVK------------------------------------VKVKVGHGGTLDPMATGVLVLGVGRGCQDLNLYLKGSKAYRAVGLLGSEYDTMDATGTITETVDVSHVTPDSLEEALVSFRGCIMQRPPVYSALRRKGKRLYELARQGEDVETEPRAVQVDRLDLIHAEDETGHRLEWPYFGLAIECQGGTYVRSLISDVARSVNARAHMTALTRTKHGPLSLDDCLPEEVWKNDAEAVVQHLINLRDDM 345
[Close]
BLAST of mRNA_H-paniculata_contig4696.11688.1 vs. uniprot
Match: UPI001CFA4E6D (probable tRNA pseudouridine synthase 1 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFA4E6D)

HSP 1 Score: 201 bits (510), Expect = 1.200e-54
Identity = 125/312 (40.06%), Postives = 176/312 (56.41%), Query Frame = 3 
Query:  738 LDSVFAVYKPKGWTSAGVVAKIKFVLRNGLRDDIRANESPPSKTANLEEQTIQAGGTSEAAEGKETNKLNKXXXXXXXXERPRTPKVKVGHGGTLDPMAAGVLVIGVGKGCRELTNFLSGSKAYRAEALLGCETDTQDAEGEETIRGPWEHVTNEDIDSALGEFTGHIMQMPPMFSALRKDGKRLYELARQGKTVE-REARPVMVYSLKQTDPRPALPRVGLDIECGGGFYVRTLIHDLGRTLGSRGHMTALERTKQGPFELRD-TLPLEDWNFDGLVEHIAKARKMMPVPPLGNSTAIKEDAVELPPVGNL 1667
            L  +FAVYKPKG TSA V+ K+K  L                         ++  G  +A++                 +R + P +K+GHGGTLD  A+GVLV+G+GKG + L+  L+GSK Y A   LG  TDT DA G+ T   P++H+  EDID  L +FTG +MQ+PP++SAL+KDG+RL +L ++G+ VE + ARPV VYSL   D +P  P   LD+ECGGGFYVR+L+ D+G+ L    H+  L RTK GPF L++  L  E W  D +   I +  + +P  P  +   +K D  E P   ++
Sbjct:   14 LSGLFAVYKPKGPTSADVLNKLKRRL-------------------------LEEAGMEQASK-----------------KRKKQP-LKMGHGGTLDSAASGVLVVGIGKGTKMLSEMLTGSKKYTALGELGKATDTLDATGKITEEKPYDHIKMEDIDGVLKKFTGTVMQVPPLYSALKKDGQRLSKLVKKGEIVEAKPARPVTVYSLTLQDFQP--PVFTLDVECGGGFYVRSLVDDIGKELSCCAHVKELTRTKHGPFTLQEHILKEEQWTIDEIANSIEQCLQFLPAEP--SCKKLKTDVEECPETKDI 278
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4696.11688.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z9D0_9STRA6.570e-7848.93tRNA pseudouridine(55) synthase n=1 Tax=Tribonema ... [more]
A0A6H5KMC7_9PHAE1.300e-6970.91tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus... [more]
F0YN09_AURAN8.900e-6547.37tRNA pseudouridine(55) synthase (Fragment) n=1 Tax... [more]
A0A7S2MBG8_9STRA1.010e-6241.23tRNA pseudouridine(55) synthase n=1 Tax=Dictyocha ... [more]
A0A7S2WB30_9STRA3.310e-6142.86tRNA pseudouridine(55) synthase n=1 Tax=Rhizochrom... [more]
A0A8J2SXF4_9STRA2.720e-5943.54tRNA pseudouridine(55) synthase n=1 Tax=Pelagomona... [more]
A0A803J5Q4_XENTR8.250e-5743.56tRNA pseudouridine(55) synthase n=3 Tax=Xenopus Ta... [more]
F7E5E4_XENTR1.190e-5543.38tRNA pseudouridine(55) synthase n=2 Tax=Xenopus tr... [more]
W7TZ56_9STRA1.540e-5542.37tRNA pseudouridine(55) synthase n=3 Tax=Nannochlor... [more]
UPI001CFA4E6D1.200e-5440.06probable tRNA pseudouridine synthase 1 n=1 Tax=Pro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4696contigH-paniculata_contig4696:1333..12597 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score227.6
Seed ortholog evalue1.3e-56
Seed eggNOG ortholog44056.XP_009041799.1
Preferred namePUS4
KEGG koko:K03177
Hectar predicted targeting categorysignal peptide
GOsGO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0031119,GO:0034337,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990481
EggNOG free text desc.mRNA pseudouridine synthesis
EggNOG OGsCOG0130@1,KOG2529@2759
EC5.4.99.25
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Exons7
Model size2601
Cds size1584
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930397.6636353-UTR-H-paniculata_contig4696:1332..22451622930397.6636353-UTR-H-paniculata_contig4696:1332..2245Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4696 1333..2245 -
1691481273.2694468-UTR-H-paniculata_contig4696:1332..22451691481273.2694468-UTR-H-paniculata_contig4696:1332..2245Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4696 1333..2245 -
1622930397.9190333-UTR-H-paniculata_contig4696:12493..125971622930397.9190333-UTR-H-paniculata_contig4696:12493..12597Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4696 12494..12597 -
1691481273.3605566-UTR-H-paniculata_contig4696:12493..125971691481273.3605566-UTR-H-paniculata_contig4696:12493..12597Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4696 12494..12597 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930397.6801639-CDS-H-paniculata_contig4696:2245..24281622930397.6801639-CDS-H-paniculata_contig4696:2245..2428Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4696 2246..2428 -
1691481273.2793815-CDS-H-paniculata_contig4696:2245..24281691481273.2793815-CDS-H-paniculata_contig4696:2245..2428Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4696 2246..2428 -
1622930397.6912625-CDS-H-paniculata_contig4696:3286..34721622930397.6912625-CDS-H-paniculata_contig4696:3286..3472Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4696 3287..3472 -
1691481273.2873204-CDS-H-paniculata_contig4696:3286..34721691481273.2873204-CDS-H-paniculata_contig4696:3286..3472Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4696 3287..3472 -
1622930397.8284733-CDS-H-paniculata_contig4696:7398..74701622930397.8284733-CDS-H-paniculata_contig4696:7398..7470Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4696 7399..7470 -
1691481273.2955084-CDS-H-paniculata_contig4696:7398..74701691481273.2955084-CDS-H-paniculata_contig4696:7398..7470Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4696 7399..7470 -
1622930397.8414333-CDS-H-paniculata_contig4696:7998..81511622930397.8414333-CDS-H-paniculata_contig4696:7998..8151Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4696 7999..8151 -
1691481273.304026-CDS-H-paniculata_contig4696:7998..81511691481273.304026-CDS-H-paniculata_contig4696:7998..8151Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4696 7999..8151 -
1622930397.8797603-CDS-H-paniculata_contig4696:9185..92841622930397.8797603-CDS-H-paniculata_contig4696:9185..9284Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4696 9186..9284 -
1691481273.3163326-CDS-H-paniculata_contig4696:9185..92841691481273.3163326-CDS-H-paniculata_contig4696:9185..9284Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4696 9186..9284 -
1622930397.8920348-CDS-H-paniculata_contig4696:10219..104081622930397.8920348-CDS-H-paniculata_contig4696:10219..10408Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4696 10220..10408 -
1691481273.332444-CDS-H-paniculata_contig4696:10219..104081691481273.332444-CDS-H-paniculata_contig4696:10219..10408Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4696 10220..10408 -
1622930397.9031355-CDS-H-paniculata_contig4696:11791..124931622930397.9031355-CDS-H-paniculata_contig4696:11791..12493Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4696 11792..12493 -
1691481273.351675-CDS-H-paniculata_contig4696:11791..124931691481273.351675-CDS-H-paniculata_contig4696:11791..12493Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4696 11792..12493 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4696.11688.1prot_H-paniculata_contig4696.11688.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4696 2246..12493 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4696.11688.1

>prot_H-paniculata_contig4696.11688.1 ID=prot_H-paniculata_contig4696.11688.1|Name=mRNA_H-paniculata_contig4696.11688.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=528bp
MTSTRTASVTLLLILPLLLPIIFAVALQLAPTAATARLSHHVHDTISAAT
TAAAFIQTATTARTSITPTTTSPTTKTIRSDTPTPMIQIAAATRTLSSSL
LYATAAMRPPVSSSLAPMRALRRTAPSFSLDAREIHHSYLMLQPAAGLGV
RTARGRTSRDLVNLMGSAEGHTTSVESPIKTKDSSQVKDSSVKAKGGNNP
EVKQTVSATAHLDSVFAVYKPKGWTSAGVVAKIKFVLRNGLRDDIRANES
PPSKTANLEEQTIQAGGTSEAAEGKETNKLNKKKKQQQQHERPRTPKVKV
GHGGTLDPMAAGVLVIGVGKGCRELTNFLSGSKAYRAEALLGCETDTQDA
EGEETIRGPWEHVTNEDIDSALGEFTGHIMQMPPMFSALRKDGKRLYELA
RQGKTVEREARPVMVYSLKQTDPRPALPRVGLDIECGGGFYVRTLIHDLG
RTLGSRGHMTALERTKQGPFELRDTLPLEDWNFDGLVEHIAKARKMMPVP
PLGNSTAIKEDAVELPPVGNLVTATVE*
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mRNA from alignment at H-paniculata_contig4696:1333..12597-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4696.11688.1 ID=mRNA_H-paniculata_contig4696.11688.1|Name=mRNA_H-paniculata_contig4696.11688.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11265bp|location=Sequence derived from alignment at H-paniculata_contig4696:1333..12597- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCAGGAGTAGTTAAATATAATATAGAGAAACAAAGAACACCACCCAATAG
GGCTGCGCTCAGTCGGATGTGGCGGTGCAGGCTGCTGAACCGCACCTACA
GTACATGACATCAACCCGAACGGCGTCCGTGACGCTACTATTAATCCTAC
CACTATTACTGCCAATAATATTTGCAGTCGCACTGCAACTAGCGCCGACA
GCAGCAACAGCTCGCCTCTCACATCACGTTCATGACACGATATCAGCGGC
AACGACGGCTGCTGCCTTCATACAAACTGCAACCACAGCAAGAACAAGCA
TCACACCAACAACAACCTCTCCTACTACTAAAACCATTCGCAGCGATACC
CCAACCCCTATGATCCAGATAGCAGCAGCAACGAGGACTCTGTCGTCTTC
GCTGCTATATGCTACAGCAGCAATGCGTCCTCCTGTGTCATCCTCGTTGG
CGCCTATGCGTGCGCTCCGACGGACCGCCCCGTCCTTCTCTCTTGACGCA
AGAGAAATCCACCATTCATACCTGATGTTGCAGCCAGCGGCCGGGCTTGG
AGTTCGGACTGCGCGAGGTCGAACGAGCAGAGATCTGGTGAATTTGATGG
GCAGCGCGGAGGGCCACACCACAAGCGTGGAATCGCCCATCAAGACCAAG
GACAGCTCCCAGGTCAAGGACAGCTCAGTCAAGGCTAAGGGTGGGAACAA
CCCCGAGGTCAAGCAGACCGTTTCCGCCACGGCGCACTTGGATAGCGTGT
TTGCGGTGTATAAGCCCAAGGGGTGGACTTCTGCGGGCGTGGTTGCTAAG
ATAAAGGTATTGTACTGTACATGCGGTAATGTACTGTTCCGTACTGCACA
TGCGAAATATATCAGTCCTTCAAACCCCCCAGGGATGCGTGTGTGTGTAT
TTTGGAGACCAGCACTCATATTTCTAACCGTCCGTGCATCGTATAATCTC
CTGTACGTGCAAAGATATCTGCCCCTCAGCCCTCAGGCCGTCTGTTTGAA
TAAGGCAGTTCAACTTAATACAGTAGAACCGTCCAGTATTTGGTTTCGCG
GGACCAACATTACTAGAACATATCTCAGATCTTGTCGGGGGATTTTCAGA
TTGCCAACGAACAACTCCTGTTTGACTGTGGTTCACGACTGTCTTTGGGA
CGCGGAAGAATCGCTCCCCATTTTTCACCCGAGATAGTTATTTGGAAATA
CTGTACCAAATAACGTGTTTACACCCGCAATTATCTGTTCGTGAATTTCG
ATTCGGTCCTGTATAGCGAATGATGAGGTGCACTAACCCACCTGTACGAA
CTTCTCGCTACAAAACGAATACCTCTTTTGCGATGCGTCATAATTCGTAA
AGCCTCGCAGAACTTTCAAATTCCGGAAAGTAAGTCGTCTCGTAACACAA
CGTCGGTGCAAGTGGACTGGGGTCTGGAACCTGCAGCTCACTGTGAGCTC
ACTATCAGCCATACAGGACCAAATCGAAATTTATAAACAAATGTTATTCG
CTTGCTCTCACACCCTATTGCCAAATGATTGTATTCCAATTGGTTCGATT
TGGATGTGACAAAAGTAGTTCACGTCCTTGTGTTTTGTCCGCTTATAGGG
TATTTTTAGACAGGATGTGATACCTTAATTTCCCAGTTTTCCATTCTGTG
TTATGGACCACATTCCATTGTCCGTCAGCATCGGCTTCGGCTCGCGACGT
ACTGTGCGTACACGCTGCGCTTGACAACATTCAAGGTTGGCACAGCAGCG
GAATATGATGACAATAGTATCTACGCCTAAAAAAAGGATGCCGACCGCGC
CCAATACGGCAAGAAACGTTCCTCTAAGACTGCAGTACATTGGCAACAAC
ACTCGAGACACTACTGGGGGGTGGATTGGACCCTGTGACTCTCTCGCGAC
AAGCCGAGTTCATTTCGTATTTCGAGTTAGTAAAGGACCAAGATCATACT
TCAGCTATCCACGTGTATGGACGGGGTCATGAATGAAACACATGGAGCAG
AGTAGTCTCGCGATTCAAAGGCTCAGTAACTACTTCAGTGGGCTCGCACC
ACAATCTGTTCGCATCTACAGATATTACATATACAAAGAAACCACCACCC
CGCATGTTCCCACTCCGTCCATGGCCGCTGCCTACTCCCCCTCCCCTCCC
CTCCCCTCCCCTCCCCCTGTGATGTAATACCCCATACAGTTCGTGCTGAG
GAATGGTTTGCGGGATGATATACGCGCCAATGAAAGCCCGCCCTCAAAAA
CGGCTAATTTGGAGGAACAAACGATACAAGCAGGAGGTACCAGTGAAGCA
GCAGAAGGGAAAGAGACGAACAAACTTAACAAAAAGAAGAAGCAACAGCA
ACAGCACGAACGGCCACGAACTCCAAAGGTGTGTGTACCCCCTCCTCACC
TTCGTGGGAGTGCCGACGAGTCATTCAACGAATGGATCAGTTGTTACGAT
AAATGCGTTCCAGCTACGGAGCACTGCCCGAAGGTTCTGCTTCGGCATCT
TCAATATAGGTTGTATCGGTCCCATCATGTGGTATCACACCTGACTGAAG
TGTTGTCCTGCATTGTTAGACAGGGGATAGTACAAGAATGTCTCAAGCGG
GGCCGGGGCGGCGTACTCATGTTTTGGATGCCGAAGTTGTTCGATCATTG
ACCCGGTATCCGATGGCTAATTGCTCCTTCATACGGTGCCAAATTTGGCT
CAAAACTGTTTCACCCATCACATTTACCCTAGCCCTCGCGTGTTCAAGCC
AATTTCGATCCCCTAGACAGATCTTGCGTTCTTTTCGCAATCCTAGGTCT
CGAAGGCCTCTATCGGAACGTAGGGGGGAGGTAAGTTTGCCCTCCCCGCG
GTCGCGGTCGTTGAGCGACTTCAATTGGCGTTGGCTACGTAACGACTCAG
CGTGAGATGTATGTGCGTGTGTGATGTTTTCGGCTGTTGGATGCTAAAAA
TAGTATTCAGGACGAAGCACATTCGGTATATCCTCCCGTGTCGAGAAGAC
ATCCTGCCATGCTCACTCCCCTCATCATATGGTACCAGCGGTTCCTTCCA
CCCTTTGCACCGAAATGAATATCCTTCCTCGGTGCTTCTCTGACATATCC
TTGTCGGTCCTGACAAATCAATATCGGGGCAAACCCGAGGTTGCTAAATG
AGTATGCCCCGAGTATGTAGCTGTGAGTGCACACCATCAACGTACTTTCC
GCTACTAAAGAGTTTATTGAATTTGATCCCTCTTTCCCACCTCGCGCGTT
CTGCGGACGCTGCCACGTTTTGTTTGTAAACGCCTATTACCTTCTTGTTT
CGCTGTGCAAAAGGTGAAAGTGGGCCACGGAGGGACGTTAGATCCCATGG
CCGCAGGGGTGTTGGTGATCGGCGTAGGCAAGGGCTGCCGGGAGCTGACG
AATTTTCTCTCTGTAAGTACTGTATCAAGTACATCAGTGGTTTCTACTCA
ACCTTGTGTAATTTTGTTGTTCCCGTCACGCCGTCGAGGCGTCCTGTTGT
TGCCTTCATGATCCGAGAGTCGTTTTGTTGCTGTCATTCTCCAAGTGTCA
TTTTGCTGTTCGCTCCTCCTCAAGTACTGCTGCAGTCAAGAGTTCAAAGG
ATGGTGCACAAGAAAGCAAAGCAGTACCCGTACGCTCTGGCCGATGACCA
CTACCAGGGCGGTGTTTTTGTGGTGGTGTCGGTGGTGGTGTTTGAGGCCA
TTGATGGAATTTCGTTGTTTTTCTTCTCGAACGTCAGCCGCCGCTGTACG
AACCAGTAGGATCAGTAGTATAACGAATCCCCCCGCGTGTTGTTTAGTAT
TGATCATTGGGGTTGTGTACCGGGGTTCTTAATGTTTGAGTATATCGGCA
TATAGGTGTATTCGCCGATGTATCCTTATTTAATACGGTAAGGTGGTCGT
CGCCGTCGCCCTCGTCATTTCGGAACAGTTTTTCAATTCTGTACTCGAGT
GAATACTGAACACACAACTATGCGAGCACAGGCTGCCACCCTGCGATCGC
AGTGAGTCCGTGGGTCGAGGCAAACACGAACAACATCGGCGTAACGGTGG
CTCTACTACAAGTAATCATACGCTTTGAAGTATGGTTATGTCGATGACGG
GTCAACTCGACAGGTCAATATGTTGCCCCACACGCCGTAGTCGTTATTTT
CTGCTGAATTAGGTCTGCCTGCTGACCGTCCAAATAATGAGTATTATCTA
TCCGGTTGGTAGTGCAAGACGAATCAATTCGTTATTATTTATTCGTTGTA
TCACCTGTTTGTCGTCTCCGTTCACAAAACAAGTCTATACGTAAAACCAC
AAATCTCCCCAACCAACTTTTTTTTTTTTTTTCTGTTCTCTGGTCTCGAG
TAAAAATATTGTTTCAGAGTTCGTGACTGTCGTTGTCGTCGCGATCATCG
TCTTATGCGTTCTTGTTTTTCTCCGCTGGACAAACCACCATCATAGGGAA
GTAAGGCGTATCGCGCGGAGGCGCTGTTGGGATGTGAAACTGACACCCAA
GACGCCGAAGGAGAGGAGACGATTCGGGGACCGTGGGAGCACGTGACGAA
CGAAGACATCGATAGTGCATTAGGCGAATTCACCGGGCACATTATGCAGG
TAAAGTTATTTCAAGTCCTGATTGATTGACAGGCGATGCTGATAATGTTT
CACCGAGGACATTATGCCGGTCAAATAAATACGCGGCTGAACGACATATA
TATATATATGTTGTAGATGTGTGTAGAGAGGTTTGATCTGGAGCTGCACA
GTCGTCGCACCGCGTGGAGAAAATTATGGGAAATATCGCGCGAGGCAACT
TCATTATTATTCCGTTTGTCCCTCCCCCTCCCTTTATTTGATTAAATGAC
TTTGGCTGATAGGTAAAGTGTACACGACTGAGATTTGAGGTTAGTTGCAT
AAAGTAGTCCCAACATGGGGTGCAATGGAGTTATTGTCACATGTGCTGTT
TTTGATCTACGGTACTCGCTGTGTGGTAAGTTGATGGACCTGTGAAAAAG
ATTCGCGGTGGGTGAATAAGGTATTTTAATTCCCTCCCCCCACCTCTACC
CCCCCCGCGCGCCCTCGCTCTCTCTCGTGGTGTGCTCATCCGTCGAACGC
CGTTTCGCCGATTGAACGACGATGAAGATGCCGCCAATGTTTTCCGCCCT
TCGAAAAGACGGCAAGCGTTTATACGAGCTGGCTCGACAAGGGAAGACGG
TAGGTCAAAGGATGATTGATGAAGGGCGAAGGGGGACTGGGGACCTTCCT
ATTGCTTCGATATTACAGTAAGGGCCACTCACTGTCTGTACTGTGGGTAC
ATGAGCTTGTTTGTTCTTGATGCCCATTTCTTTCAGGGAGGAAAATCGAG
TCGTCCTGCGATACGGAGAGGGAGGGGGTGTACTCATGAAAACGCATACC
GAATCTTTCGACCGTTTACCTCGACTTTCCTACGAAATGGGGATGAAGCA
TGCTGGGTTTTCGCCGGCCATGCTGCGTTTCACAGGGATAACACTCGCCA
CTACAGCAGTCATTGTTCCTGCTTTGCTAGGCCGATCAAATTTTGTCATG
AGGTTCCGGGCGTTCCGGGCAATCACATGTTGTACGTCCCTTTTGGAGTC
ACTACTTTCCTAACCCCAAGGCTAATCCTACCCGTAAACATATCAACCCT
AGTCGTCTCTTTTTTTTTTTTCTGTTGTTGGTTGTTTCTGAGTATTTCGC
TTGGTACGTGAAGCCAAGTGGTTGAATCCATTTTGTTTTGTCAAAGAGAG
GTTGAGATATGTTAGATCCGAAGAGGTATAGTTGTTCATCCATTGGTGTC
TATCCTGCACTAACTCGGAGTGTTTGAGGGTTGGTGGCACTGATATGGAG
TCGGGATACGGTAGGAAGCCGGATAATTTGAGCTGGTTTGTTTCAAGTTC
TGAGCCGCTTTCTGGAGAGGCTAGGAAAATGTGTACATTTCCGCCTCGAA
CAATACGACCATTCCTAATCATGCATTGTGCACCTTTCGGGGTGCGTGAA
CGCATGCCATTGAATGGGTTTTGATTTTGATTTTGCTTTTTTTGAGCCGC
TTTGCGGAGCGGCACACCTTAATAACTCATCCATCTTGACGAGGACGCGC
GGTCAATGGTCTAACAAGTGTGGTATGCAAAGCAAGAGCTTACCGGAGTC
CTACTTTGGGTGTCCGTCATCCTTGACCTTCTTGGCGCCTTTTCGGTTGT
TTTACGAGGCTGTTTCGGAACGAAAAAGCACAATCACCTGTCTGTGCCGT
ATATATTGCCTGTACTGGAAGTGCCTGTCTGAACAGCGGCGACTCCCATC
CCCGTAACGATGCCATTAGGTCACTAGATGGGCGCAAAAAGAGGAGATCC
GTACATATCAATAACAGACTGATGGCTTGCCTTGTACTAAATTTACCGAC
CGAATAGAGATGGTGAAATATCAACTGGAAATTCTGATTTCATCAGACGT
TGCCTAGAGGTCTAGATAGCCTTTCTTTTTTTGGTTATTGTATTGGCGTT
GGATTTCCCTCTAGTTGTTTGAAGTAGTGGGAACAGACAAGAACCAAATG
GGACACGGCGCTAAAAATGTTTGATACGAATAAGGCCATCCCTGTCCTAG
CAGCCTCTTGAAAAAAAAAGCAGGTCTACGCTGGTTCGCAAGATGCTGAA
CTGCCAACATTCAGCCAAATTTGCACATTTCCGCTTTGGGCAGACACCGC
TGTTCGAGAGTGGGGTCGCACAGAATACGGTTCGTTTTCTTTCCATGAGT
GTGCGGCAGCTGTGGGCTGCCTTGCGACTATCATATTTAGGAGTATTGAC
TGCACCGACATCCCCCGCATTAATACGAGTATTTGGAACATTCGCAACGA
CGAAAATACTAGAAGTATTTTGCCCCGAGGTTCAGCACGAGTATGTTTGT
TCTACATGGGTACTAAATAGGAAAACGAATTAATAGGAGGTGAACACTTT
CTATGTATTCCATGTACCTGCAGGTTTTGAAACTGGGGCAAATGCTTCTG
AATATTCGTGGCAAATATTCGGCAAGCATTCGTGTTTGTCGGGTGGGGGA
GGGGTTTCGCTTTTTTCGAGATATGATGCATGGTCATGTCGGATTAGATA
ACGTTGACCCGGATGTTTCGTGTTTTTTCGGGAAGGGAGCATGAATGGGC
GAGGGGAGGCATGTTGAATGCTACTCGTACTTGTTGTTTATTCTCTATCT
ACTGTAACCGGTTTAGGAGTAACAGCCAGTGACCATCACCAGCTGTGGAG
GGCGTATTCGTACTCGGTCTTCAGGAAACAAGCCTGATGTTTGCGCGTTC
TTGCTCTGCACGGATGGATACTAAGATAAAAACGACCTCTATCGGCAAGA
CAGCGACCAAGTTGTGCACCTGAGATACACTAATAGGCTGGTTATCCCTT
CGACTTCTGGAAAATGACAAAAATAAGTTGACAGAAAGAGTTTTTTTAGG
AAATCCGATGCCGTGTTATTATATATCACGTTGTCGTTTGTGTTTTTGTC
ATGTTCCGACTGCAACGACTGTGGTGGGACCATCACGCACAACAAGACGC
CATAGACACAGCGACTATCGCTTGCTAGGACACTCTCGGGAGACGTTGTT
ACCTGTCAATATCTCTACTTCTGATCTTTGTTTTGCCGTTACCCCAGTAT
CACCGCGCATATAAATATGGTGCTGTAGCAGTACACACAGTACACCAACT
GTGTTGCATGCATCCTACTGTACTGTCCGTTTCTTCCGAGGCCTTCCGCA
ACTCTGCCGGCTGTCTCACGCTGTTGGCGATGTCCAGCTAGCTGCCACCA
CCAGATGGAATCAATATTTGGTATACTTGCTCCACATCAAGCACGTGGCG
TTGCAGCTGGAGCAACCCAACCATGGGCATGCAATGGTTGAAATGAAAGT
GTTCACTCTTTGACCTCCTGTCCTTCCTAGCGCCACATGATTCTATTCAC
TTTGTAGTACGTTTTCTCATTTGCATCCCTTGATGCTGTACTTTTTTATA
GTCTACGTGTTTTCAAACCGTTACGATGTCATTCATCATCCCCGCTGAAA
TCACTTCGTCCATCCTAAATCGGTACGGTACCCTTTATTTTGGGACACAC
ACTACACTCTCCCCCCAGGAGTCAGAGGGTTGAGCGTTCAGCAGACGTAC
TGGTCACAGTTCACGACTGTTGGTCGCCAGCGATTTGATATGCTGGTCGT
TACGGAGTCCCGTTCTCGAAGGGCTGATATCGTAGCAGTGACTGTAGGGA
GCCATGGATTCGTAGGTGTCGTAAGTGATCTTGTACCACACTGAAGGACA
CAACATGTTTTTTTGTATGTTATCGATGGGTATTAATGTACTAGCCGCAA
GACCCCTCAACTGTTGGTGGTGATGTGGTTGTCTAGACCTTTTCTTTTTT
TTTAACCCCCCGAAAGGCTGAGGCAGAAACCTTTACCGATGCTTCCATAC
TTAAGTATTTTACCAAATTATGTCTACATTCCTTTCAACAGAACAGAGTA
ATTTATTCCTCTGCAGGGTAGGCGCCACCCCGGTTCGGCTGAACCAAGTA
GGCAGTGTGGGGGTTGCACTCACGAAAAGACCTCTGACTAGACTTCTAGT
CATGCTCAGTTCATGAGCTATCCTACCCGTTCGGGCGTAGGTCCGTGGGT
TGTCTAGACCTTCGTTTTGTTCCACTTCGCCTCTAATTTTTCCCTGCTCA
ATTGTTTCAGGTTTATTTGTGGCTGGTGAATCTAGACCGCTAGATGTGAG
TGTGGGTGTCACAGCTGGTTCAGTTGTGAGTGCAGGCTGCACAACCTCGG
TTTAATATGTGTTTCAGTGTTTCAGGCTGGTGGGTGCTGAAGAAAGCCTT
CAGCCCAACCCGTATTCAATGTACCATCTCTTTTGGAAGGGACATCGTTG
TGGCGTACCTCTCCGCTTACTCACGCACCCATCCACCTCTTTCATATATC
TAATGGCATCTTCTGGACAAAACGGTACACTCTAGAGCAAAATACCCTCA
CCGCTTATCTGACGTTTGTTCTCATGTCGGGAAGCAAATCAGAGCTGCGC
TCTTAATATATATCATCAGCTTCTCTCTCTCTCTCTTTGCTTTGCAACTT
GGATCGATTTTTTTTTCTTGACAAGGTTGAGCGGGAAGCCCGGCCGGTGA
TGGTTTATTCCCTGAAGCAAACAGACCCCCGACCGGCGCTGCCTAGAGTA
GGGCTAGACATAGAGTGCGGGGGAGGGTTCTACGTTCGAACTCTGATTCA
TGATCTGGGGAGAACGCTTGGCTCGAGGGGGCACATGACGGCACTGGAGA
GGACGAAACAGGTGCGACGATAAAGAAAAAAAACGTATTCGGAGTTTTCG
AAAACGCATGGGTATATGGGAAAAAAAAAAAGACCCCTCTCTGTTTATTT
GCTTTATACGTTGTTCAGAGTAGTCGTAGATGGTTGATCCGGGGCACATG
TAATAACTATGCTCATGCTGAACCTTGAAGTAAACCCTTCTCTCTTTTTT
TTTTTTTTTTGTGATTTTCGTCGCGTGTGTCCTCTCTATGTGTTTGTATC
CGTCCGAGGGGAGTGAATTTTGAATTACATGTCTACTACGTACAACTTCA
AGAAATGAAGCTGGAGATTTTGGGGGGAAAAAAATAAGGAGGTTGCCACA
AGAAATTGAAAAATTGAGCTCAAATTGTAGTCTCGTACTAATTCCTATAA
AGTAAATGGAAAAAGAGAAGGTGGTTAATTGCTGTTGGCCGGAACAAGCA
ACAGAATAGCTTGGGTCTGACTTTTATTCTCTTTGCTGGCGGACCGGGAC
TGTACTCATACGCGGGGCAATTTTCGTCTCCGATGCTTTGGTTGTTGTGG
GACTGACCTCTTTTCCCAAAGTTTTTTTGTTTTTGTTGGATCTATAGTGG
TAGTTATTAGAGAGGTAGAGTCGCTAGACCGTGGGAAAAGTAGAGAGGCT
AAATGCTTGCTATGATTTTTTTTGCGTATATGGTACGATTGAAAACTCTT
ATATGAGTAATGATGCGCCATTGATGACAAACTTTGATTGCTGCAGCAGT
AAAGATGACCAAAAATTCTCGTGATCACTGTGCTAAGCTTTTCGTGCAAT
TTTACGTTGCAGTTTTTTCCCATATGTTCTTGTTGGCGTTGCTGCCCTTT
GTTTCTGCCGATAAATCAGGGGCCGTTCGAGCTGAGAGACACACTTCCCT
TGGAAGACTGGAATTTCGACGGGCTTGTTGAACATATCGCGAAAGCGCGG
AAGATGATGCCGGTGCCGCCGCTCGGAAATAGCACAGCGATAAAAGAAGA
TGCGGTGGAACTACCGCCGGTTGGCAATCTTGTGACCGCCACGGTGGAGT
AACCTAAATTACGACTGTAATTGGCAGTGGTTCAGGAGATTTCTGGTGTA
TTTCATCGTACCACCCTTTCAAGAGGAGAAGCGGTGGGATGAATATCATC
TTGATTTGAGCTAGCTGGGAAAATGCTCTGTCCCAATCGATCTCGGCAGC
GGTGTGTGTCTTGGGGAGGTATGCTTTATGGTGCATGTTTGTGATTAATT
GTTATTGTGCGGATCACGATAGCTCTATAGAGCTATCGTTGTTGCAGTTG
CGATTTTGGCCCCATTTAGAGGTGTCGTGATAGAGGGCCTCCCCTCACAT
GCGACGAGGTCCCTTTACAAGTCATGTGTCAAAGTTGAAAAATTCTAGAC
GGAAGGAGCTTGCGGAGATATATTTTGAGGATTATTCCGAGGAACGTTCC
TATTTAGGGGAAGGACCAGGCGTACGCGGGTAAACACGGACTCTGGTGGT
TTGTTGATGGGCACCACTGCTGGTAGAGCTGGCGGGATTAGAGACTCCTT
TCAGGCGGCGGGAACTATGCTCCTAGCGCTCGGGGGGATATAAATATGCA
ACCCCCCATCGCTTTTCCGATAAGATGTTTAATTTAAGTGCAACGTGTTC
AAATATTTCACCCCCCGGACAAAAACGAATATTTGCCGTATTCGCCACGA
AAATGAAGAAATATCCTCCTGAGGTTCAGAATGAGCTCGTGCATTCTACG
TGCCCCGGGCCATCCACGATTGGAAATATTACTCGTAAATCGAATAAACG
GGTGGATAATTTCTTTTACGTGTCCATTCATTCTGAGAGTCAGGCGAATA
TTTTTTATTTGCTGTGGCGAATATGCCAAGTACTTGTATCTGTCCGCCGG
GTGAAATATTGGTTCAATCGTCCTTGTTTAATAAAATAATTTTCAGGTTC
AAAAGAGAACACCCT
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Coding sequence (CDS) from alignment at H-paniculata_contig4696:1333..12597-

>mRNA_H-paniculata_contig4696.11688.1 ID=mRNA_H-paniculata_contig4696.11688.1|Name=mRNA_H-paniculata_contig4696.11688.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3168bp|location=Sequence derived from alignment at H-paniculata_contig4696:1333..12597- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACATCAACCCGAACGGCGTCCGTGACGCTACTATTAATCCTACCACT
ATTACTGCCAATAATATTTGCAGTCGCACTGCAACTAGCGCCGACAGCAG
CAACAGCTCGCCTCTCACATCACGTTCATGACACGATATCAGCGGCAACG
ACGGCTGCTGCCTTCATACAAACTGCAACCACAGCAAGAACAAGCATCAC
ACCAACAACAACCTCTCCTACTACTAAAACCATTCGCAGCGATACCCCAA
CCCCTATGATCCAGATAGCAGCAGCAACGAGGACTCTGTCGTCTTCGCTG
CTATATGCTACAGCAGCAATGCGTCCTCCTGTGTCATCCTCGTTGGCGCC
TATGCGTGCGCTCCGACGGACCGCCCCGTCCTTCTCTCTTGACGCAAGAG
AAATCCACCATTCATACCTGATGTTGCAGCCAGCGGCCGGGCTTGGAGTT
CGGACTGCGCGAGGTCGAACGAGCAGAGATCTGGTGAATTTGATGGGCAG
CGCGGAGGGCCACACCACAAGCGTGGAATCGCCCATCAAGACCAAGGACA
GCTCCCAGGTCAAGGACAGCTCAGTCAAGGCTAAGGGTGGGAACAACCCC
GAGGTCAAGCAGACCGTTTCCGCCACGGCGCACTTGGATAGCGTGTTTGC
GGTGTATAAGCCCAAGGGGTGGACTTCTGCGGGCGTGGTTGCTAAGATAA
AGATGACATCAACCCGAACGGCGTCCGTGACGCTACTATTAATCCTACCA
CTATTACTGCCAATAATATTTGCAGTCGCACTGCAACTAGCGCCGACAGC
AGCAACAGCTCGCCTCTCACATCACGTTCATGACACGATATCAGCGGCAA
CGACGGCTGCTGCCTTCATACAAACTGCAACCACAGCAAGAACAAGCATC
ACACCAACAACAACCTCTCCTACTACTAAAACCATTCGCAGCGATACCCC
AACCCCTATGATCCAGATAGCAGCAGCAACGAGGACTCTGTCGTCTTCGC
TGCTATATGCTACAGCAGCAATGCGTCCTCCTGTGTCATCCTCGTTGGCG
CCTATGCGTGCGCTCCGACGGACCGCCCCGTCCTTCTCTCTTGACGCAAG
AGAAATCCACCATTCATACCTGATGTTGCAGCCAGCGGCCGGGCTTGGAG
TTCGGACTGCGCGAGGTCGAACGAGCAGAGATCTGGTGAATTTGATGGGC
AGCGCGGAGGGCCACACCACAAGCGTGGAATCGCCCATCAAGACCAAGGA
CAGCTCCCAGGTCAAGGACAGCTCAGTCAAGGCTAAGGGTGGGAACAACC
CCGAGGTCAAGCAGACCGTTTCCGCCACGGCGCACTTGGATAGCGTGTTT
GCGGTGTATAAGCCCAAGGGGTGGACTTCTGCGGGCGTGGTTGCTAAGAT
AAAGTTCGTGCTGAGGAATGGTTTGCGGGATGATATACGCGCCAATGAAA
GCCCGCCCTCAAAAACGGCTAATTTGGAGGAACAAACGATACAAGCAGGA
GGTACCAGTGAAGCAGCAGAAGGGAAAGAGACGAACAAACTTAACAAAAA
GAAGAAGCAACAGCAACAGCACGAACGGCCACGAACTCCAAAGTTCGTGC
TGAGGAATGGTTTGCGGGATGATATACGCGCCAATGAAAGCCCGCCCTCA
AAAACGGCTAATTTGGAGGAACAAACGATACAAGCAGGAGGTACCAGTGA
AGCAGCAGAAGGGAAAGAGACGAACAAACTTAACAAAAAGAAGAAGCAAC
AGCAACAGCACGAACGGCCACGAACTCCAAAGGTGAAAGTGGGCCACGGA
GGGACGTTAGATCCCATGGCCGCAGGGGTGTTGGTGATCGGCGTAGGCAA
GGGCTGCCGGGAGCTGACGAATTTTCTCTCTGTGAAAGTGGGCCACGGAG
GGACGTTAGATCCCATGGCCGCAGGGGTGTTGGTGATCGGCGTAGGCAAG
GGCTGCCGGGAGCTGACGAATTTTCTCTCTGGAAGTAAGGCGTATCGCGC
GGAGGCGCTGTTGGGATGTGAAACTGACACCCAAGACGCCGAAGGAGAGG
AGACGATTCGGGGACCGTGGGAGCACGTGACGAACGAAGACATCGATAGT
GCATTAGGCGAATTCACCGGGCACATTATGCAGGGAAGTAAGGCGTATCG
CGCGGAGGCGCTGTTGGGATGTGAAACTGACACCCAAGACGCCGAAGGAG
AGGAGACGATTCGGGGACCGTGGGAGCACGTGACGAACGAAGACATCGAT
AGTGCATTAGGCGAATTCACCGGGCACATTATGCAGATGCCGCCAATGTT
TTCCGCCCTTCGAAAAGACGGCAAGCGTTTATACGAGCTGGCTCGACAAG
GGAAGACGATGCCGCCAATGTTTTCCGCCCTTCGAAAAGACGGCAAGCGT
TTATACGAGCTGGCTCGACAAGGGAAGACGGTTGAGCGGGAAGCCCGGCC
GGTGATGGTTTATTCCCTGAAGCAAACAGACCCCCGACCGGCGCTGCCTA
GAGTAGGGCTAGACATAGAGTGCGGGGGAGGGTTCTACGTTCGAACTCTG
ATTCATGATCTGGGGAGAACGCTTGGCTCGAGGGGGCACATGACGGCACT
GGAGAGGACGAAACAGGTTGAGCGGGAAGCCCGGCCGGTGATGGTTTATT
CCCTGAAGCAAACAGACCCCCGACCGGCGCTGCCTAGAGTAGGGCTAGAC
ATAGAGTGCGGGGGAGGGTTCTACGTTCGAACTCTGATTCATGATCTGGG
GAGAACGCTTGGCTCGAGGGGGCACATGACGGCACTGGAGAGGACGAAAC
AGGGGCCGTTCGAGCTGAGAGACACACTTCCCTTGGAAGACTGGAATTTC
GACGGGCTTGTTGAACATATCGCGAAAGCGCGGAAGATGATGCCGGTGCC
GCCGCTCGGAAATAGCACAGCGATAAAAGAAGATGCGGTGGAACTACCGC
CGGTTGGCAATCTTGTGACCGCCACGGTGGAGTAAGGGCCGTTCGAGCTG
AGAGACACACTTCCCTTGGAAGACTGGAATTTCGACGGGCTTGTTGAACA
TATCGCGAAAGCGCGGAAGATGATGCCGGTGCCGCCGCTCGGAAATAGCA
CAGCGATAAAAGAAGATGCGGTGGAACTACCGCCGGTTGGCAATCTTGTG
ACCGCCACGGTGGAGTAA
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