prot_H-paniculata_contig4696.11688.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4696.11688.1
Unique Nameprot_H-paniculata_contig4696.11688.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length528
Homology
BLAST of mRNA_H-paniculata_contig4696.11688.1 vs. uniprot
Match: A0A835Z9D0_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9D0_9STRA)

HSP 1 Score: 263 bits (672), Expect = 4.420e-81
Identity = 137/280 (48.93%), Postives = 182/280 (65.00%), Query Frame = 0
Query:  213 DSVFAVYKPKGWTSAGVVAKIKFVLRNGLRDDIRANESPPSKTANLEEQTIQAGGTSEAAEGKETNKLNKXXXXXXXXERPRTPKVKVGHGGTLDPMAAGVLVIGVGKGCRELTNFLSGSKAYRAEALLGCETDTQDAEGEETIRGPWEHVTNEDIDSALGEFTGHIMQMPPMFSALRKDGKRLYELARQGKTVEREARPVMVYSLKQTDPRPALPRVGLDIECGGGFYVRTLIHDLGRTLGSRGHMTALERTKQGPFELRDTLPLEDWNFDGLVEHIAK 492
            D + AV+KP GWTS+ VV K++  L+ G R  I   ++  ++TAN       AGG +    G +              +R +  K+KVGHGGTLDPMA GVLV+G+G G +EL  +L G+K Y A  +LG ETDT D+EG+ET    W HVT + +  AL +F G IMQ+PPM+SALRKDGKRL+ELARQGK VER+ARPV +Y L+      ALP   L+++C GG Y+RTLI D+ R LG+RGHMT+L RTKQGPF L   L  + W+F+ ++ H+ K
Sbjct:    3 DGLMAVHKPAGWTSSDVVTKVRNELQRGFRRAIEEEQATLTETANA------AGGPASGHAGAQ--------------QRNKRVKIKVGHGGTLDPMATGVLVLGIGSGTKELEKYLQGAKGYSAVGILGSETDTLDSEGQETEAMEWSHVTRDALMQALEQFRGDIMQVPPMYSALRKDGKRLHELARQGKVVERDARPVTIYQLEAPAEGVALPSFALNVQCSGGTYIRTLIADIARALGTRGHMTSLVRTKQGPFGLEHCLDQQHWHFEQILAHLDK 262          
BLAST of mRNA_H-paniculata_contig4696.11688.1 vs. uniprot
Match: A0A6H5KMC7_9PHAE (tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMC7_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 1.910e-72
Identity = 117/165 (70.91%), Postives = 134/165 (81.21%), Query Frame = 0
Query:  329 LSGSKAYRAEALLGCETDTQDAEGEETIRGPWEHVTNEDIDSALGEFTGHIMQMPPMFSALRKDGKRLYELARQGKTVEREARPVMVYSLKQTDPRPALPRVGLDIECGGGFYVRTLIHDLGRTLGSRGHMTALERTKQGPFELRDTLPLEDWNFDGLVEHIAKA 493
            + G K YRAEALLG ET+TQDA GE T+ G WEHVT EDID+ALG+FTG IMQ+PPMFSAL KDG+RLYELAR+G TVEREAR V V SL+Q DP   LP +GL++ECGGGFYVRTLI DLGR LG+R HMTALERTKQGPFELR  L LE+W +D L +H+  A
Sbjct:   31 IKGGKGYRAEALLGHETNTQDALGEATVHGEWEHVTKEDIDAALGQFTGDIMQVPPMFSALHKDGQRLYELARKGITVEREARQVRVDSLRQADPALPLPLLGLELECGGGFYVRTLIEDLGRALGTRAHMTALERTKQGPFELRHALRLEEWEYDRLCKHLGDA 195          
BLAST of mRNA_H-paniculata_contig4696.11688.1 vs. uniprot
Match: F0YN09_AURAN (tRNA pseudouridine(55) synthase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN09_AURAN)

HSP 1 Score: 226 bits (577), Expect = 2.000e-67
Identity = 135/285 (47.37%), Postives = 163/285 (57.19%), Query Frame = 0
Query:  215 VFAVYKPKGWTSAGVVAKIKFVLRNGLRDDIRANESPPSKTANLEEQTIQAGGTSEAAEGKETNKLNKXXXXXXXXERPRTPKVKVGHGGTLDPMAAGVLVIGVGKGCRELTNFLSGSKAYRAEALLGCETDTQDAEGEETIRGPWEHVTNEDIDSALGEFTGHIMQMPPMFSALRKDGKRLYELARQGKTVEREARPVMVYSLKQTDPRPA-------LPRVGLDIECGGGFYVRTLIHDLGR--TLGSRGHMTALERTKQGPFELRDTLPLEDWNFDGLVEHI 490
            V AVYKP GW+SA VVAK++ VL        RA + P  K                                          KVKVGHGGTLDP+A GVLV+GVG+GCRE+  +L G+K YRA A LG ETDT DAEG      P++HVT + +++AL  FTG I Q PPM+SAL  +GKRLYELAR+G  VERE+RPV +  L   D           LP  GLD+EC GG Y+RTLI DL R   + S  HM  LERTKQGPFEL D L   DW+FD + +H+
Sbjct:    2 VCAVYKPPGWSSANVVAKLRGVLE-------RAIKIPGQKKF----------------------------------------KVKVGHGGTLDPLARGVLVVGVGRGCREMQGYLKGAKRYRAVAELGKETDTLDAEGAVVEEAPFDHVTLDALEAALPAFTGDIRQTPPMYSALHHEGKRLYELAREGIEVERESRPVTISRLALDDRGVGAVAGPLGLPHFGLDVECSGGTYIRTLISDLARHEAVKSVAHMVELERTKQGPFELGDCLHEADWDFDAICQHL 239          
BLAST of mRNA_H-paniculata_contig4696.11688.1 vs. uniprot
Match: A0A7S2MBG8_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MBG8_9STRA)

HSP 1 Score: 224 bits (572), Expect = 2.430e-65
Identity = 134/325 (41.23%), Postives = 170/325 (52.31%), Query Frame = 0
Query:  213 DSVFAVYKPKGWTSAGVVAKIKFVLRNGLRDDIRANESPPSKTANLEEQTIQAGGTSEAAEGKETNKLNKXXXXXXXXERPRTPKVKVGHGGTLDPMAAGVLVIGVGKGCRELTNFLSGSKAYRAEALLGCETDTQDAEGEETIRGPWEHVTNEDIDSALGEFTGHIMQMPPMFSALRKDGKRLYELARQGKTVEREARPVMVYSLK------------------------------------QTDPRPA----LPRVGLDIECGGGFYVRTLIHDLGRTLGSRGHMTALERTKQGPFELRDTLPLEDWNFDGLVEHIAKARKMM 497
            D + AVYKP+ WTSA VVAK++  L+  LR                     + GG                             KVKVGHGGTLDP+A GVLV+G+GKGCR+LT++L+G+K YRA   LG +TDT D+ GE     PW+HVT+  +  AL  F G I+Q+PPMFSA RKDGKRLY+LAR+GK VEREAR V V SL                                        P P     LP   LD+ECGGG Y+R++I DLG  + S  HMT LERT+QGPFEL D L    W+F+ +  H  +  +++
Sbjct:   47 DGLVAVYKPQTWTSADVVAKVRSTLQRELRH--------------------RTGGR---------------------------VKVKVGHGGTLDPLATGVLVLGIGKGCRQLTDYLAGAKRYRAVGKLGMKTDTLDSLGEAVAEKPWDHVTDAQLSDALEAFRGEILQIPPMFSAKRKDGKRLYDLAREGKVVEREARAVTVTSLSLLQEHDDWLRAGALTRGGNDGSSQVGLAVNARLEVADAPPCPPSFMDLPSFALDVECGGGTYIRSIIDDLGDAVDSCAHMTWLERTRQGPFELDDCLAEAHWSFEEICAHTVRCTQLL 324          
BLAST of mRNA_H-paniculata_contig4696.11688.1 vs. uniprot
Match: A0A7S2WB30_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WB30_9STRA)

HSP 1 Score: 219 bits (559), Expect = 9.650e-64
Identity = 135/315 (42.86%), Postives = 168/315 (53.33%), Query Frame = 0
Query:  215 VFAVYKPKGWTSAGVVAKIKFVLRNGLRDDIRANESPPSKTANLEEQTIQAGGTSEAAEGKETNKLNKXXXXXXXXERPRTPKVKVGHGGTLDPMAAGVLVIGVGKGCRELTNFLSGSKAYRAEALLGCETDTQDAEGEETIRGPWEHVTNEDIDSALGEFTGHIMQMPPMFSALRKDGKRLYELARQGKTVEREARPVMVYSLKQ-----------------------------------TDPRPAL--PRVGLDIECGGGFYVRTLIHDLGR--TLGSRGHMTALERTKQGPFELRDTLPLEDWNFDGLVEHI 490
            + AVYKP+G+TS+  VAK++ VL+  +R+ +                                                R  KVKVGHGGTLDP+A GVLV+GVG GC++LT++LSGSK YRA   LG ET+T D EG+     P +HVT E +  AL +F G I Q+PPMFSAL KDGKRLYELARQG TVERE+RPV ++ L                                     +DP  AL  P   LD+EC GG Y+R+LI DL R  ++ S  HMT LERTKQGPF L   LPL  W FDG+  H+
Sbjct:   33 LLAVYKPRGFTSSDAVAKVRSVLQRHMREAVG-----------------------------------------------RRVKVKVGHGGTLDPLATGVLVLGVGGGCKQLTDYLSGSKRYRALGRLGAETETLDTEGKVVEECPADHVTPEALLGALPDFRGDIEQVPPMFSALHKDGKRLYELARQGITVERESRPVTIHHLDLLQGPTEWAAALPTAAGTARVGHGLGDDDICAPVPFSDPGAALALPDFALDVECSGGTYIRSLISDLARHHSVQSCAHMTLLERTKQGPFTLDHCLPLSQWTFDGICTHV 300          
BLAST of mRNA_H-paniculata_contig4696.11688.1 vs. uniprot
Match: A0A8J2SXF4_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SXF4_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.020e-61
Identity = 128/294 (43.54%), Postives = 160/294 (54.42%), Query Frame = 0
Query:  213 DSVFAVYKPKGWTSAGVVAKIKFVLRNGLRDDIRANESPPSKTANLEEQTIQAGGTSEAAEGKETNKLNKXXXXXXXXERPRTPKVKVGHGGTLDPMAAGVLVIGVGKGCRELTNFLSGSKAYRAEALLGCETDTQDAEGEETIRGPWEHVTNEDIDSALGEFTGHIMQMPPMFSALRKDGKRLYELARQGKTVEREARPVMVYSLKQTDPRP--------ALPRVGLDIECGGGFYVRTLIHDLGRTLGSRGHMTALERTKQGPFELRDTLPLEDW-NFDGLVEHIAKARKMM 497
            D V  VYKP GWTS+ VV+KI+  L   +R                                                +  +  KVKVGHGGTLDP A G LVIGVG GCR + ++L G K Y A   LG  TDT D+EG  T   P++  T + +++ L +FTG I+Q+PPM+SAL KDGKRLY+LARQG  VEREAR V V  L+  D R         +LP  GLD+EC GG Y+RTLI DL R  GS GHM  LERT+QGPF L   L  E W +FD +  H+  +R ++
Sbjct:   40 DGVCCVYKPPGWTSSNVVSKIRGTLERAIR-----------------------------------------------IKGEKRQKVKVGHGGTLDPNARGCLVIGVGTGCRLMQSYLKGGKEYFAIGKLGEATDTLDSEGNVTSTQPYDDSTLQRMEALLPQFTGDILQIPPMYSALHKDGKRLYDLARQGLEVEREARQVSVSRLRMVDDRGVGSHEAPLSLPFFGLDVECSGGTYIRTLIDDLAREAGSCGHMVELERTRQGPFGLEHCLGDEAWGDFDAVCAHVEASRAIV 286          
BLAST of mRNA_H-paniculata_contig4696.11688.1 vs. uniprot
Match: A0A803J5Q4_XENTR (tRNA pseudouridine(55) synthase n=3 Tax=Xenopus TaxID=8353 RepID=A0A803J5Q4_XENTR)

HSP 1 Score: 206 bits (524), Expect = 4.200e-59
Identity = 132/303 (43.56%), Postives = 169/303 (55.78%), Query Frame = 0
Query:  212 LDSVFAVYKPKGWTSAGVVAKIKFVLRNGLRDDIRANESPPSKTANLEEQTIQAGGTSEAAEGKETNKLNKXXXXXXXXERPRTPKVKVGHGGTLDPMAAGVLVIGVGKGCRELTNFLSGSKAYRAEALLGCETDTQDAEGEETIRGPWEHVTNEDIDSALGEFTGHIMQMPPMFSALRKDGKRLYELARQGKTVE-REARPVMVYSLKQTDPRPALPRVGLDIECGGGFYVRTLIHDLGRTLGSRGHMTALERTKQGPFELRD-TLPLEDWNFDGLVEHIAKARKMMPVPPLGNSTAIKEDA 512
            L  +F VYKPKG TSA VVA++K  L                K A L+E                               + R   +K+GHGGTLD  A+GVLVIG+G G + L+  L+GSK Y     LG  TDT DA G  T   P++H+T ED++ AL  FTG+IMQ+PP+FSAL++DGKRL  L R G  VE + ARPV VY L   D +P  P   LD+ECGGGFYVR+L++DLG+ L S   +  L RTKQGPF L D TL  EDWN   + + + +   ++P  P GN    KE+A
Sbjct:   12 LSGLFPVYKPKGPTSAQVVAQLKGSLL---------------KEAGLKEYV-----------------------------KKRKQTLKIGHGGTLDSSASGVLVIGIGDGTKMLSTMLAGSKKYTTVGELGKATDTLDASGTVTEEKPYDHITKEDLEGALKLFTGNIMQVPPLFSALKRDGKRLSCLLRDGAEVEAKPARPVTVYQLSLRDFQP--PVFTLDVECGGGFYVRSLVNDLGKALKSCASVKELVRTKQGPFTLEDHTLKEEDWNISRIAQALQEYGPLLPAEP-GNKRLKKENA 267          
BLAST of mRNA_H-paniculata_contig4696.11688.1 vs. uniprot
Match: F7E5E4_XENTR (tRNA pseudouridine(55) synthase n=2 Tax=Xenopus tropicalis TaxID=8364 RepID=F7E5E4_XENTR)

HSP 1 Score: 204 bits (520), Expect = 6.450e-58
Identity = 131/302 (43.38%), Postives = 168/302 (55.63%), Query Frame = 0
Query:  212 LDSVFAVYKPKGWTSAGVVAKIKFVLRNGLRDDIRANESPPSKTANLEEQTIQAGGTSEAAEGKETNKLNKXXXXXXXXERPRTPKVKVGHGGTLDPMAAGVLVIGVGKGCRELTNFLSGSKAYRAEALLGCETDTQDAEGEETIRGPWEHVTNEDIDSALGEFTGHIMQMPPMFSALRKDGKRLYELARQGKTVE-REARPVMVYSLKQTDPRPALPRVGLDIECGGGFYVRTLIHDLGRTLGSRGHMTALERTKQGPFELRD-TLPLEDWNFDGLVEHIAKARKMMPVPPLGNSTAIKED 511
            L  +F VYKPKG TSA VVA++K  L                K A L+E                               + R   +K+GHGGTLD  A+GVLVIG+G G + L+  L+GSK Y     LG  TDT DA G  T   P++H+T ED++ AL  FTG+IMQ+PP+FSAL++DGKRL  L R G  VE + ARPV VY L   D +P  P   LD+ECGGGFYVR+L++DLG+ L S   +  L RTKQGPF L D TL  EDWN   + + + +   ++P  P GN    KE+
Sbjct:   56 LSGLFPVYKPKGPTSAQVVAQLKGSLL---------------KEAGLKEYV-----------------------------KKRKQTLKIGHGGTLDSSASGVLVIGIGDGTKMLSTMLAGSKKYTTVGELGKATDTLDASGTVTEEKPYDHITKEDLEGALKLFTGNIMQVPPLFSALKRDGKRLSCLLRDGAEVEAKPARPVTVYQLSLRDFQP--PVFTLDVECGGGFYVRSLVNDLGKALKSCASVKELVRTKQGPFTLEDHTLKEEDWNISRIAQALQEYGPLLPAEP-GNKRLKKEN 310          
BLAST of mRNA_H-paniculata_contig4696.11688.1 vs. uniprot
Match: W7TZ56_9STRA (tRNA pseudouridine(55) synthase n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZ56_9STRA)

HSP 1 Score: 205 bits (522), Expect = 8.030e-58
Identity = 125/295 (42.37%), Postives = 163/295 (55.25%), Query Frame = 0
Query:  211 HLDSVFAVYKPKGWTSAGVVAKIKFVLRNGLRDDIRANESPPSKTANLEEQTIQAGGTSEAAEGKETNKLNKXXXXXXXXERPRTPKVKVGHGGTLDPMAAGVLVIGVGKGCRELTNFLSGSKAYRAEALLGCETDTQDAEGEETIRGPWEHVTNEDIDSALGEFTGHIMQMPPMFSALRKDGKRLYELARQGKTVEREARPV------MVYSLKQTDPRPALPRVGLDIECGGGFYVRTLIHDLGRTLGSRGHMTALERTKQGPFELRDTLPLEDWNFDG--LVEHIAKARKMM 497
            +++ + A++KP+ WTS  VV K++ +L    R           + A ++                                     KVKVGHGGTLDPMA GVLV+GVG+GC++L  +L GSKAYRA  LLG E DT DA G  T      HVT + ++ AL  F G IMQ PP++SALR+ GKRLYELARQG+ VE E R V      ++++  +T  R   P  GL IEC GG YVR+LI D+ R++ +R HMTAL RTK GP  L D LP E W  D   +V+H+   R  M
Sbjct:   98 NMNGLVAIFKPRNWTSNDVVQKVRSLLEKEAR-----------RRAGVK------------------------------------VKVKVGHGGTLDPMATGVLVLGVGRGCQDLNLYLKGSKAYRAVGLLGSEYDTMDATGTITETVDVSHVTPDSLEEALVSFRGCIMQRPPVYSALRRKGKRLYELARQGEDVETEPRAVQVDRLDLIHAEDETGHRLEWPYFGLAIECQGGTYVRSLISDVARSVNARAHMTALTRTKHGPLSLDDCLPEEVWKNDAEAVVQHLINLRDDM 345          
BLAST of mRNA_H-paniculata_contig4696.11688.1 vs. uniprot
Match: UPI001CFA4E6D (probable tRNA pseudouridine synthase 1 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFA4E6D)

HSP 1 Score: 200 bits (509), Expect = 1.080e-56
Identity = 125/307 (40.72%), Postives = 174/307 (56.68%), Query Frame = 0
Query:  212 LDSVFAVYKPKGWTSAGVVAKIKFVLRNGLRDDIRANESPPSKTANLEEQTIQAGGTSEAAEGKETNKLNKXXXXXXXXERPRTPKVKVGHGGTLDPMAAGVLVIGVGKGCRELTNFLSGSKAYRAEALLGCETDTQDAEGEETIRGPWEHVTNEDIDSALGEFTGHIMQMPPMFSALRKDGKRLYELARQGKTVE-REARPVMVYSLKQTDPRPALPRVGLDIECGGGFYVRTLIHDLGRTLGSRGHMTALERTKQGPFELRD-TLPLEDWNFDGLVEHIAKARKMMPVPPLGNSTAIKEDAVELP 516
            L  +FAVYKPKG TSA V+ K+K  L                         ++  G  +A++                 +R + P +K+GHGGTLD  A+GVLV+G+GKG + L+  L+GSK Y A   LG  TDT DA G+ T   P++H+  EDID  L +FTG +MQ+PP++SAL+KDG+RL +L ++G+ VE + ARPV VYSL   D +P  P   LD+ECGGGFYVR+L+ D+G+ L    H+  L RTK GPF L++  L  E W  D +   I +  + +P  P  +   +K D  E P
Sbjct:   14 LSGLFAVYKPKGPTSADVLNKLKRRL-------------------------LEEAGMEQASK-----------------KRKKQP-LKMGHGGTLDSAASGVLVVGIGKGTKMLSEMLTGSKKYTALGELGKATDTLDATGKITEEKPYDHIKMEDIDGVLKKFTGTVMQVPPLYSALKKDGQRLSKLVKKGEIVEAKPARPVTVYSLTLQDFQP--PVFTLDVECGGGFYVRSLVDDIGKELSCCAHVKELTRTKHGPFTLQEHILKEEQWTIDEIANSIEQCLQFLPAEP--SCKKLKTDVEECP 273          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4696.11688.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z9D0_9STRA4.420e-8148.93tRNA pseudouridine(55) synthase n=1 Tax=Tribonema ... [more]
A0A6H5KMC7_9PHAE1.910e-7270.91tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus... [more]
F0YN09_AURAN2.000e-6747.37tRNA pseudouridine(55) synthase (Fragment) n=1 Tax... [more]
A0A7S2MBG8_9STRA2.430e-6541.23tRNA pseudouridine(55) synthase n=1 Tax=Dictyocha ... [more]
A0A7S2WB30_9STRA9.650e-6442.86tRNA pseudouridine(55) synthase n=1 Tax=Rhizochrom... [more]
A0A8J2SXF4_9STRA1.020e-6143.54tRNA pseudouridine(55) synthase n=1 Tax=Pelagomona... [more]
A0A803J5Q4_XENTR4.200e-5943.56tRNA pseudouridine(55) synthase n=3 Tax=Xenopus Ta... [more]
F7E5E4_XENTR6.450e-5843.38tRNA pseudouridine(55) synthase n=2 Tax=Xenopus tr... [more]
W7TZ56_9STRA8.030e-5842.37tRNA pseudouridine(55) synthase n=3 Tax=Nannochlor... [more]
UPI001CFA4E6D1.080e-5640.72probable tRNA pseudouridine synthase 1 n=1 Tax=Pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002501Pseudouridine synthase II, N-terminalPFAMPF01509TruB_Ncoord: 298..442
e-value: 2.0E-48
score: 164.5
IPR014780tRNA pseudouridine synthase II, TruBTIGRFAMTIGR00431TIGR00431coord: 299..479
e-value: 4.8E-54
score: 181.2
IPR014780tRNA pseudouridine synthase II, TruBPANTHERPTHR13767TRNA-PSEUDOURIDINE SYNTHASEcoord: 186..482
IPR014780tRNA pseudouridine synthase II, TruBHAMAPMF_01080TruB_bactcoord: 212..521
score: 15.109
IPR032819tRNA pseudouridylate synthase B, C-terminalPFAMPF16198TruB_C_2coord: 443..480
e-value: 9.0E-9
score: 35.4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..527
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..24
score: 0.558
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 212..494

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4696contigH-paniculata_contig4696:2246..12493 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4696.11688.1mRNA_H-paniculata_contig4696.11688.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4696 1333..12597 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4696.11688.1 ID=prot_H-paniculata_contig4696.11688.1|Name=mRNA_H-paniculata_contig4696.11688.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=528bp
MTSTRTASVTLLLILPLLLPIIFAVALQLAPTAATARLSHHVHDTISAAT
TAAAFIQTATTARTSITPTTTSPTTKTIRSDTPTPMIQIAAATRTLSSSL
LYATAAMRPPVSSSLAPMRALRRTAPSFSLDAREIHHSYLMLQPAAGLGV
RTARGRTSRDLVNLMGSAEGHTTSVESPIKTKDSSQVKDSSVKAKGGNNP
EVKQTVSATAHLDSVFAVYKPKGWTSAGVVAKIKFVLRNGLRDDIRANES
PPSKTANLEEQTIQAGGTSEAAEGKETNKLNKKKKQQQQHERPRTPKVKV
GHGGTLDPMAAGVLVIGVGKGCRELTNFLSGSKAYRAEALLGCETDTQDA
EGEETIRGPWEHVTNEDIDSALGEFTGHIMQMPPMFSALRKDGKRLYELA
RQGKTVEREARPVMVYSLKQTDPRPALPRVGLDIECGGGFYVRTLIHDLG
RTLGSRGHMTALERTKQGPFELRDTLPLEDWNFDGLVEHIAKARKMMPVP
PLGNSTAIKEDAVELPPVGNLVTATVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002501PsdUridine_synth_N
IPR014780tRNA_psdUridine_synth_TruB
IPR032819TruB_C
IPR020103PsdUridine_synth_cat_dom_sf