Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 924 |
| Cds size | 690 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1182.1166.1 >prot_H-paniculata_contig1182.1166.1 ID=prot_H-paniculata_contig1182.1166.1|Name=mRNA_H-paniculata_contig1182.1166.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=230bp
MTSEISFHPGMELFGPGLVDLETAMPPLHPTRRSLSPQPQRRLSASQEQE
EGQTEGVLGEDGPVLLLSNSLDHRGDAARMQAAGSAVAEPGGPLGGDDSF
TSSTAAADGTPLYDDDVSASTAPMSPPTLGGRPMGMGIMGALMGERRSRG
GGVGVAVGRGVAQNNRRRTFGGGIGDHDTFATASAGMPRVRSVSSVSSAE
SSASTASSSSSDGGGGGERQQPSRRRGVSL back to topmRNA from alignment at H-paniculata_contig1182:4407..9142- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1182.1166.1 ID=mRNA_H-paniculata_contig1182.1166.1|Name=mRNA_H-paniculata_contig1182.1166.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4736bp|location=Sequence derived from alignment at H-paniculata_contig1182:4407..9142- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCAAAATGAAGAAGACAACAGATTAAAAAGCAGGTACCGACGGTTCCTT
GCGCCCGTACTTGAAGCGGATGTGGTTGATTTACCCATGGCGGAACTTTT
TTTTGTTTCACCCATGTATGTGGGCAGACAGGTTGCTATACAACATGCAA
AGATCGAGAATCCATGCAAGATCCATACAGACAGACGTATATGTTCTCTT
TTTGGCTGGACTGATACATCTATGCGACTTTTTGTTGGTTCTATCCAGGT
ACGAGCAGGGCAGCCTTGTGCTTCCGCGTCCGCATATATATATATATATC
TGTATGATATGCACTTTCAGCAGTTTTGCCTATAATTGACGACCAACAAC
GGTCAGCCGAAGTGGAAGAAAGATCCTGCACACCATATTATCCTTGGCAC
CATTGCTGGATTACGACATTTATGTACATGATGTATATACACAACAAATA
ATGCAGGCCCAAACAAACAAACAAATCGTCCTCGTCGTCTAGAAATGAAT
CTTGTATTATTATTGATAATTAAGGATATACATCACTTTCCAACTGTTGA
TCTAAACAAGACTTTTCATCTTCCAGGAACGATTTCTGCATACAATAACA
GGGTCCTTTCTTAACGATCACCCGTTCATGACCATACTACGTGAAACAGC
TGCTCACCATTCTCATTGGTATGGCGGATCACATCCCATATATTAACTGC
ATAGTCGAAGAAACTATACTGACTGGGGCACATACTGTTGATTTGAAGAC
TATAGTGGGCAGGTCATGGCCACGCCAGTGGCGGCGACTACGTCGATGAC
GTTGTAGTAGCTCTAGCGGATGAATACGGACTCGCTGTGCTCGCCGTGAC
TCTCCTACGCTCGAATGTAGGCGCAGTTAACATTTATTTTATTCAAGTTT
ACGGCCTGCTGTTGTACACAAACCCGTTGCGCTCGCTCACGGTAGTATGT
ACGTGCACTTGTAACGTTCAAGTTTCGCTCGACACACACGCACTTGCTGC
GCTCACTGTGGCTCGCTTACGCTCACTCACATACAGACACATGGCAAAAC
AACAACTTTGTAAAGTGGAAGAAGAGGTATCTGTAACGGTACGATGCGGG
TGAGCATTCATGTATTCATAGACTGGTAGAAACTCTCACCTACCATTGGA
GGGGCAGATAGATGGGAAAACGAAATTTATGGTCAGTGCAGTACAGGACA
ACGGACTAAAATGTGAAACTACACTTCCTTAGTAATACCTATATGCACCG
GCGGTTTTACGCAATTTAGTTATTCAGGTTCTTCAGGTCCTGCCCATTCC
TTCTACAAACCCTGGTGCGTGTGGTGCGTGTGGTGCGTGTGGACGACAGC
ATCATCTATCCAACACAAACTTGAAAAAACGTATATTGAACTGTTTATGT
TTTGTTTTCCCGACTCTCTTCTGTCTCTCTCTCTTTCTCTTGGTACAAAG
ACAATCTTTCCACACAATAATACTACATGTTTCCACATGGACTGGCGCTT
CTGTTGCTTCTCGGTTTAGTTACCCTGCAGTGTAGGCGTGGACTACCTGT
CACTGTTTTTGTGTGCATTGCGTGTAAATCCTGACAAGGATATGTCTGCG
TTGCATTGTGCATTGCGTTGTGAGCTGGACCTGGCAGCTGGTGGCCATGT
ATGAGCTGACCGTATGGAGATTTGATTGTTTATTTCTAAATCTATTTGGT
TTGAGACAACATTTTCCGGCTATAAAATTTTCGAAAGTCGTACTTTCGAT
TCGTGTTTTTGAATTTACTTGAGTTGAAACTTACAAACAGTTCCGAAAAT
AACAAGACCTTAGCGCCTATACGAGTATGGCCAACAGCTAGAACAAGAGG
AGAGGGAAACTTACAATCTATACATTTTTCGAGATGTTGTTGGTACCTAG
ATTTCCCCCCCATCAAAGCTAAAGCGCCTCGACAGAATAGCTGTACAGTA
GCGCTGTTGCTTTGCTACTCTTTGCTGACACACCTAACACACGACAAATC
TAACTGTAAATGCATGCATTTACAGTGATTCACACATCGACAATGGGGTG
AATGTAGAATCTACTTGATTTTACCAGAAGATGCTGCATGTCCAGCGGCA
TCAGATATCGAAACGAGTGCGAAGGAGACAAGATCATTTCTGGGCGCACC
ATCACGTCCTTAGTGAACAAAATAATAAGATAAACGAAACCACATATTCT
TCTAGTGCTGGCAACCAAAACAATAAAACCCAGCAGTCAGTTCCCTCCCA
TCTACTTGCTTTGAAGGCCATCAACAGAGGCTGCTACTGAGAAAACTGTC
CACATTACCACCCTTAAAACGCGGCGGAATTGTTCGAAATTCCGCCGCGT
TTTTAATTTTTCTTCCGCATATTCAGGGTCCCTCCCTGTGAGTCCCCCGT
GTCAAAAAAATTTGGCTCTATTTTCCGTTCTTTTCGTGCGCGGGATCATC
ACCCCAGACAGGACAAGGAAGGCGGGCAGAGGCCGCGGAGGGGTACACAT
CACCATAACTATAGCTACACTCAGCAAATCAGTCGGTACCGGTTCATCCT
TTCGCAGCCTTAACACTGTGGCGAAGTCGACGTGGCAGCAGGTCGCTTTA
CAGACTGCGCGAGACAAGCCTTTGCGCCTTGTTGTCGTTGGTGAGTTTCG
ATGTCTGCATGTACATGTACAAAGTGCAGCTATGTTTTTGCCATACGTCC
AGGGTTCGTTTGTGCAGCGTGAGGTCGGTCTAGATGTGCCGGCGAAGAAG
ATACTAGAGGTGCCATGGCAACATTGATGCTCTTTTTTGCAAAAAAGTTA
AGTAAGGTGCAGGGGGAGTACTAGTGCTCTCGCTCGAGTGACGTCGCACA
GTGGCCGTTGGTGTGTTGCTCTGCTTGAATATCATGTACTGTCCCGACTT
GTCGAAAAGTGGCGTGGACCTTCGAAAAGTGGCGTGGACCTTCCCGCTAT
ATTTTGTTATGATATAAGATAACAATTTGATACCACATGTTTGTGTGTAC
ATACAGACAGTTGTACATACCCCAGAAATTTGTTCGCTGATACATGTGCG
GTTCTCACCATCCTCCCATGATACTCCTTCTCCAGCATTCTGTGCTCAGA
TTACAGTCTCGTGTTGTCGGCAACTGCGAGTGATGAGGGCAACCCTCGAG
CACATGTTGCGTGATTTACTTGAGTTGGGGGTGACACTATCAAGTACAGT
TTTTATTTTTGTGTCACAACATACTTTTAATAAATTTACTGACTGTACGG
TATTTCGCGCAAGATTTTCAGCCTGTTCAACTCGTTGCCCCTGAGAAGCT
GCCCGCACTACAACTTTCGTATTTAGCCTTTGGATTGCAACCGACATAGT
GAGCGGTGCCCATCAGATGCAGCCTGCCTGCTGAGGCCATTCTATGTGCG
CTGGCCTGTTTGAAGACCGTGTTCATAAGACCCAGGTAGTCCTTTTCTAC
CGATGGATTTTCCTCCAACTTTGGCGCAAATTAAATTTATGGTTGAGGTT
GTAGGTAGTCCCTGTATAGGACAAGTTTTTAGTCCGTTCAACTGGCCCCC
CCCTGAGCAGGTGCCATCAACACCGCTGCAGTAGCCCCGTGGATTACAAC
TAACAGAGCGACTGGTACTCATTGGACACAGCATATACTCTTCAGTCATC
CGATGTGCTCTCGTCTATTTAGAGATCGCGTGCATGGGACCCACGATTCG
GTTTTCTTGCGGATTCGGCGTAAATATAATTATGGTTGACGTAGCTCGGA
CCTGTGAACCAACATGTCTTGAACAACAGGCCGGATGGGAAGCCTTGGCT
GTTTGTTATTTATCTGCCGTACATAAGATATAGACTTCAGACAACTCCAT
CACACTTCGACAAGGGTACGCCAGCCGCCACTTAGTTTCAACATTAGAGA
CTCCCGTCCCACTTATGCAGCCGACGCCAGCGCCCCACACGCCTAAAGAT
CGCGAACCCGACCCTTCCACTCCCCCGCCCCACCACCCCCTCCCCTTCCT
CTCCCCCCCATTTTCTTTCCCAACTTAAAGAGTGTGTGATTAGATAATGA
CGTCTGAGATCTCTTTTCACCCGGGGATGGAATTGTTCGGGCCCGGCCTA
GTAGACCTTGAGACGGCGATGCCGCCGCTGCACCCAACGCGGCGCTCGCT
GTCCCCCCAGCCTCAACGTCGCCTCTCGGCAAGCCAAGAACAGGAGGAAG
GACAGACGGAAGGTGTGCTCGGTGAAGACGGCCCAGTGCTGCTCCTGTCG
AACTCCCTCGATCACCGAGGAGACGCGGCGAGAATGCAGGCCGCCGGCTC
CGCCGTGGCAGAACCCGGGGGTCCTCTCGGCGGCGACGATAGCTTCACCT
CTTCCACTGCCGCCGCCGACGGCACACCGTTGTATGACGATGATGTGTCG
GCATCAACAGCGCCAATGTCACCACCAACGTTAGGCGGCAGGCCAATGGG
CATGGGCATCATGGGCGCTCTAATGGGAGAGCGACGATCCCGCGGCGGCG
GAGTTGGCGTGGCCGTCGGCAGAGGCGTCGCCCAGAACAATCGGAGGCGT
ACGTTCGGCGGCGGAATCGGTGATCATGACACATTCGCGACGGCCAGTGC
TGGTATGCCCAGGGTCCGTAGCGTTAGCAGTGTCAGTAGCGCCGAAAGTT
CAGCTAGCACAGCTAGCAGCAGCAGCAGCGATGGCGGCGGCGGCGGAGAG
CGGCAGCAGCCATCAAGGAGACGCGGAGTGTCGCTC back to topCoding sequence (CDS) from alignment at H-paniculata_contig1182:4407..9142- >mRNA_H-paniculata_contig1182.1166.1 ID=mRNA_H-paniculata_contig1182.1166.1|Name=mRNA_H-paniculata_contig1182.1166.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1380bp|location=Sequence derived from alignment at H-paniculata_contig1182:4407..9142- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACGTCTGAGATCTCTTTTCACCCGGGGATGGAATTGTTCGGGCCCGG
CCTAGTAGACCTTGAGACGGCGATGCCGCCGCTGCACCCAACGCGGCGCT
CGCTGTCCCCCCAGCCTCAACGTCGCCTCTCGGCAAGCCAAGAACAGGAG
GAAGGACAGACGGAAGGTGTGCTCGGTGAAGACGGCCCAGTGCTGCTCCT
GTCGAACTCCCTCGATCACCGAGGAGACGCGGCGAGAATGCAGGCCGCCG
GCTCCGCCGTGGCAGAACCCGGGGGTCCTCTCGGCGGCGACGATAGCTTC
ACCTCTTCCACTGCCGCCGCCGACGGCACACCGTTGTATGACGATGATGT
GTCGGCATCAACAGCGCCAATGTCACCACCAACGTTAGGCGGCAGGCCAA
TGGGCATGGGCATCATGGGCGCTCTAATGGGAGAGCGACGATCCCGCGGC
GGCGGAGTTGGCGTGGCCGTCGGCAGAGGCGTCGCCCAGAACAATCGGAG
GCGTACGTTCGGCGGCGGAATCGGTGATCATGACACATTCGCGACGGCCA
GTGCTGGTATGCCCAGGGTCCGTAGCGTTAGCAGTGTCAGTAGCGCCGAA
AGTTCAGCTAGCACAGCTAGCAGCAGCAGCAGCGATGGCGGCGGCGGCGG
AGAGCGGCAGCAGCCATCAAGGAGACGCGGAGTGTCGCTCATGACGTCTG
AGATCTCTTTTCACCCGGGGATGGAATTGTTCGGGCCCGGCCTAGTAGAC
CTTGAGACGGCGATGCCGCCGCTGCACCCAACGCGGCGCTCGCTGTCCCC
CCAGCCTCAACGTCGCCTCTCGGCAAGCCAAGAACAGGAGGAAGGACAGA
CGGAAGGTGTGCTCGGTGAAGACGGCCCAGTGCTGCTCCTGTCGAACTCC
CTCGATCACCGAGGAGACGCGGCGAGAATGCAGGCCGCCGGCTCCGCCGT
GGCAGAACCCGGGGGTCCTCTCGGCGGCGACGATAGCTTCACCTCTTCCA
CTGCCGCCGCCGACGGCACACCGTTGTATGACGATGATGTGTCGGCATCA
ACAGCGCCAATGTCACCACCAACGTTAGGCGGCAGGCCAATGGGCATGGG
CATCATGGGCGCTCTAATGGGAGAGCGACGATCCCGCGGCGGCGGAGTTG
GCGTGGCCGTCGGCAGAGGCGTCGCCCAGAACAATCGGAGGCGTACGTTC
GGCGGCGGAATCGGTGATCATGACACATTCGCGACGGCCAGTGCTGGTAT
GCCCAGGGTCCGTAGCGTTAGCAGTGTCAGTAGCGCCGAAAGTTCAGCTA
GCACAGCTAGCAGCAGCAGCAGCGATGGCGGCGGCGGCGGAGAGCGGCAG
CAGCCATCAAGGAGACGCGGAGTGTCGCTC back to top
|