mRNA_H-paniculata_contig11808.1156.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig11808.1156.1
Unique NamemRNA_H-paniculata_contig11808.1156.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 265 bits (678), Expect = 9.470e-75
Identity = 186/521 (35.70%), Postives = 249/521 (47.79%), Query Frame = 1
Query:    1 LESAIEEARTEGLPPNGVAELRKIVMNSHFHAFRWALSGDPPADMKPLRVHVPADARAARARPRPMSRDKAEWLNDHFTKLAQAGMVFANPQARFGSVAMAMPK----KVTYRMVADYRAVNNLIAPSAMPMPNLEEIG*GMAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRR--QTG*ER---------------RCQS*L*CWRHF*TTRAGRGVRRTK*P*QEKTGQRNARRXXXXXXSASPRPCRYTIRGQTVVC*SFLTQEIGFGEAA*RRYHRRN*AQAATRRK*VMSR*NF*V-----KHS---------RGPQRRWSGVDKEAYAIVLTF-------WDGAHTFCDHRNLAYIFHPEA----------------------YAYTIVHISGELNSWGDLFSRW 1371
            L+ A++ A   GL P G+  LR++V +  F+ FR  + GDPPA++ P+ V +   A+  +AR R  + DK +WL      L   G+V+ N QA + S  M  PK    KVTYR V D+RAVN  I  S  PMP+LE     ++ A+ + +LD+LQ YW M L P+AQEIFTM+   G+Y+P RVPQGVLN+TSY+QGTM  +L  L    C VWVDDI  W  T ++L+  L ++L R +  G++  AHK   +   + WCGK+YS     HD +R+  LA+ R  +T  E                R    +   R F          RTK         R A        + +P       R Q +V  +        G+A        +    +   +   S  +  V      H          RG Q RW+ VDKE +AI+ TF       W G H   DHRNLAYIF PEA                      Y YTI HISGE N WGDL SRW
Sbjct:  602 LDRAVDSAADAGLSPWGLDRLRQVV-DRRFNVFRRGVRGDPPANVPPMTVKLKTGAKPVKARLRTYNPDKTKWLTTCLAALVALGLVYVNLQAIWASAIMLTPKRSGDKVTYRFVGDFRAVNRQIEKSPGPMPDLEADMQRLSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDLN---CIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSVKWCGKVYSKGVIEHDRDRLSGLANLRRPETAGELMQFLQAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTK---------RVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKAVLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRW 1109          
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 259 bits (663), Expect = 9.520e-73
Identity = 190/524 (36.26%), Postives = 244/524 (46.56%), Query Frame = 1
Query:    1 LESAIEEARTEGLPPNGVAELRKIVMNSHFHAFRWALS-GDPPADMKPLRVHVPADARAARARPRPMSRDKAEWLNDHFTKLAQAGMVFANPQARFGSVAMAMPKKVTYRMVADYRAVNNLIAPSAMPMPNLEEIG*GMAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRRQTG*ERRCQS*L*C--WRHF*TTRAGRGVRRTK*P*QE------KTGQRNARRXXXXXXSASPRPCRYTIRGQTVVC*-------------------------SFLTQ----EIGFGEAA*RRYHRRN*AQAATRRK*VMSR*NF*VKHSRGPQRRWSGVDKEAYAIVLTF-------WDGAHTFCDHRNLAYIFHPEA----------------------YAYTIVHISGELNSWGDLFSRW 1371
            L+SA+  A   GL    V  LR I+ +  ++AFR  L  GDPPA+++PLRV +   AR  +ARPR  +  K  WL       A  G+VF N QA + S AMA PKK  YR+V+D+RA N  +      MPN E     ++ A  + +LDLLQ YWQ  L P+AQEIFT+ T  G+YTP RVPQG+LN+TSYFQ T+  +L GL    C VWVDD+  W     +L+  L ++L+RL+  G+Y  AHK   F   + WCGK+YS     HDPER+  LA+ R+          L    W      R    V   +   ++         +R A        + +P         Q +V                           SFLTQ    ++  G       H      + T                   Q+RW+ VDKE YAIV TF       WD  H F DHRNLAYIF PEA                      Y YTI HISGE N WGDL SRW
Sbjct:  710 LDSAVSSAAAAGLEEPHVGRLRGII-SERWNAFRRGLRHGDPPANVEPLRVTLKPGARPVKARPRVYNPIKTAWL-------AGLGLVFLNMQAVWASAAMATPKKGGYRLVSDFRAANKQVEKVPGVMPNPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILDGLN---CFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALSHPSPGCAVLMFPDASDEHWGSFLTQVPQDQLDRGVPVEDMAHEPMGFLSGT--------------FKGAQQQRWATVDKEGYAIVSTFKRLEYLLWDSVHIFTDHRNLAYIFDPEACVSAVAKTTAQRLDQWKAVLGQYDYTIRHISGERNCWGDLLSRW 1208          
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A6A4C7W4_9STRA (RNA-directed DNA polymerase (Fragment) n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4C7W4_9STRA)

HSP 1 Score: 197 bits (501), Expect = 2.520e-51
Identity = 154/523 (29.45%), Postives = 234/523 (44.74%), Query Frame = 1
Query:    1 LESAIEEARTEGLPPNGVAELRKIVMNSHFHAFRWALSGDPPADMKPLRVHVPADARAARARPRPMSRDKAEWLNDHFTKLAQAGMVFANPQARFGSVAMAMPK---KVTYRMVADYRAVNNLIAPSAMPMPNLEEIG*GMAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRRQTG*ERRCQS*L*C--WRHF*TTRAGRGVRRTK*P*QEKTG---QRNARRXXXXXXSA---------------------------SPRPCRYTIRGQTVVC*SFLTQEIGFGEAA*---RRYHRRN*AQAATRRK*VMSR*NF*VKHSRGPQRRWSGVDKEAYAIVLTFWD---------GAHTFCDHRNLAYIFHPEA-------------------YAYTIVHISGELNSWGDLFSRW 1371
            L+  ++EA   G+P   V  LR +V + H   FR  L  DPPA ++PL+V +  DA   R +PR  +  ++ +L ++  +L + G +  N  A++   A+ + K   +  +R+  DYR VN +  P A  MPNL  +   + GA  F   D+++ +WQ+ LD  +QE+ + +T   VYTPTRVPQG ++S  +FQ  M D +A +L +   VWVDD+ I+A T +E ++ L+     L+ R +  +A K+ LF+ E  WCGK+ SG+   HDPERV  L++          Q  +    W H       R V     P QE+ G   +R  RR       A                           SP      I   ++   S +  E+   + +    ++ HR    +  T                +  Q  W+ V+KEA+ IV    D         G   FCDH NL YIF P                       +TI H++GE N W D+ SRW
Sbjct:  466 LDQLVDEALANGMPGEHVDRLRSLV-HEHGDVFRERLGDDPPALVEPLKVTLADDAVPFRCKPRKYAPLQSAFLREYTAELEKRGFIRKNNAAKWACAAVPVRKPGSQTEFRITIDYRPVNKVTVPIAGAMPNLAVVSSSVRGAKCFAKFDMIKGFWQLPLDVDSQELMSFMTEDTVYTPTRVPQGAVDSAIHFQMQMQDAMAPMLQRNALVWVDDVIIFAPTVEEFLQALKEFFIILRDRRLKLSAAKSSLFQLEALWCGKLISGSGVRHDPERVDALSALPVPSTVAELQYFVCASNWLHDSLPDYARVVA----PLQERLGLERKRIGRRNKNALNVAVTLTKAEVTSYNEVKTLIKASVPLVFPSPTSELVVITDASLTGWSIVVTEVQAWDDSLPVDKQQHRMVLCKGGT---------------FKDSQLNWAIVEKEAFPIVKACTDLEYLLQRERGFKLFCDHANLIYIFAPHVELKKHVRDRLQRWAMRLCGLRFTIEHVAGETNVWADIVSRW 968          
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A2P4Y094_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y094_9STRA)

HSP 1 Score: 196 bits (499), Expect = 4.750e-51
Identity = 156/507 (30.77%), Postives = 215/507 (42.41%), Query Frame = 1
Query:    1 LESAIEEARTEGLPPNGVAELRKIVMNSHFHAFRWALSGDPPADMKPLRVHVPADARAARARPRPMSRDKAEWLNDHFTKLAQAGMVFANPQARFGSVAMAMPKK-------VTYRMVADYRAVNNLIAPSAMPMPNLEEIG*GMAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRRQTG*ERRCQS*L*C--WRHF*TTRAGR---GVRRTK*P*QEKTGQRNARRXXXXXXS-------------------------ASPRP----CRYTIRGQTVVC*SFLTQEIGFGEAA*RRYHRRN*AQAATRRK*VMSR*NF*VKHSRGPQRRWSGVDKEAYAIV---------LTFWDGAHTFCDHRNLAYIFHPEAYAYTIVHISGELNSWGDLFSRW 1371
            L+S +  AR +GL   GV  LR+I++     +FR     DPP  +  L+V V  +A+  +A+PR  S +   +L+ H  KL + G+VF + ++R+ S    + KK          RM  D R VN         MP LE +   + G  VF  LD  + YW + L   +QE+FT +T +G+YTPTRVP G  ++ +Y QG + ++   LLG     W+DDI  +A +  EL++ L  VL R +  G+   A K   F  E+ WCGKM S A   H P+RVQ L   +        Q  L    W         R   G+        +  G R   +                                A P P    C YT   Q          E G  +    + H R  A  + R                G   RW  ++KEAYAIV         L    G   + DHRNL YIF P  + Y I H+ GE N WGDL SRW
Sbjct:  568 LDSKLAAARAKGLSAKGVKRLREILLRRQ-DSFRLEFGSDPPVKVAALQVRVKVNAQPTKAQPRRYSPNDRAFLDRHTAKLQEFGLVFLSHRSRWASAPRIVRKKEQDSDPTADPRMTIDTRGVNERTEAMPWSMPVLEVVLGALEGVRVFFALDWFRGYWHLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDLLGNGILAWLDDILGYAESEDELLQLLDQVLARCEAYGLKLHAKKCDFFEIEVKWCGKMVSAAGVCHCPDRVQGLVEMQPPQTAGDLQQFLCAVNWMRQSIPEYNRLTAGLHAVLEEAMKAAGSRKKVKLAKFPLDQIGWGDPQLADLAAVKAALLKMVPLAHPSPTAEVCLYTDASQDSWGAVATQLEPGEVQLPLEQQHHRPLAFLSGR--------------FVGASSRWPTIEKEAYAIVEATRRLEYLLLRPGGFRLYMDHRNLVYIFAP--FTYVIEHVPGEANVWGDLLSRW 1057          
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A6G0MLJ8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0MLJ8_9STRA)

HSP 1 Score: 194 bits (492), Expect = 2.860e-50
Identity = 162/530 (30.57%), Postives = 226/530 (42.64%), Query Frame = 1
Query:    1 LESAIEEARTEGLPPNGVAELRKIVMNSHFHAFRWALSGDPPADMKPLRVHVPADARAARARPRPMSRDKAEWLNDHFTKLAQAGMVFANPQARFGSVAMAMPKK-------VTYRMVADYRAVNNLIAPSAMPMPNLEEIG*GMAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRR--QTG*E------------------RRCQS*L*CWRHF*TTRAG--RGVRRTK*P*QEKTGQRNARRXXXXXXSAS---------PRP----CRYTIRGQTVVC*SFLTQEIGFGEAA*RRYHRRN*AQAATRRK*VMSR*NF*VKHSRGPQRRWSGVDKEAYAIV---------LTFWDGAHTFCDHRNLAYIFHPE----------------------AYAYTIVHISGELNSWGDLFSRW 1371
            L+S +  AR +GL   GV  LR+I++     +FR     DPP  + PL+V V  +A+  +A+PR  S D   +L+ H  KL + G+VF N ++R+ S    + KK          RM  D R VN        PMP LE +   + GA VF  LD  + YWQ+ L   +QE+FT +T +G+YTPTRVP G  ++ +Y QG + ++    LG     W+DDI  +A +  EL++ L  VL R +  G+   A K   F  E+ WCGKM S A   H P+R Q L   +  QT  +                   R  + L          AG  + V+  K P  ++ G  + +        A+         P P    C YT   Q          E G  +    + H    A  + R                G   RW  ++KEAYAIV         L    G   + DHRNL YIF P                       ++ Y I H+ GE N WGDL SRW
Sbjct:  304 LDSKLAAARAKGLSAMGVKRLREILLRRQ-DSFRLEFGCDPPVKVAPLQVRVKVNAQPTKAQPRRYSPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPSADPRMTIDTRGVNERTEAMPWPMPVLEVVLGALEGAKVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDRLGNGILAWLDDILGYAESEDELLQLLDQVLARCEAYGLKLHAKKCEFFEIEVKWCGKMVSAAGVRHCPDRGQGLVEMQPPQTAGDLQQFLCAMNWMRQSIPEYNRLTAGLYAVLEEAMKAAGSRKKVKLAKFP-LDQIGWGDPQLADLAAVKAALLKMVPLAHPSPTAAVCLYTDASQDSWGAVATQLEPGEVQLPLEQQHHHPLAFLSGR--------------FVGTSSRWPTIEKEAYAIVEATRRLEYLLLRPGGFRLYTDHRNLVYIFAPYGPDTAMARYQADKLQRWALSLLSFTYVIEHVPGEANVWGDLLSRW 817          
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A6A3Q7S3_9STRA (Uncharacterized protein n=6 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3Q7S3_9STRA)

HSP 1 Score: 194 bits (492), Expect = 3.840e-50
Identity = 162/530 (30.57%), Postives = 226/530 (42.64%), Query Frame = 1
Query:    1 LESAIEEARTEGLPPNGVAELRKIVMNSHFHAFRWALSGDPPADMKPLRVHVPADARAARARPRPMSRDKAEWLNDHFTKLAQAGMVFANPQARFGSVAMAMPKK-------VTYRMVADYRAVNNLIAPSAMPMPNLEEIG*GMAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRR--QTG*E------------------RRCQS*L*CWRHF*TTRAG--RGVRRTK*P*QEKTGQRNARRXXXXXXSAS---------PRP----CRYTIRGQTVVC*SFLTQEIGFGEAA*RRYHRRN*AQAATRRK*VMSR*NF*VKHSRGPQRRWSGVDKEAYAIV---------LTFWDGAHTFCDHRNLAYIFHPE----------------------AYAYTIVHISGELNSWGDLFSRW 1371
            L+S +  AR +GL   GV  LR+I++     +FR     DPP  + PL+V V  +A+  +A+PR  S D   +L+ H  KL + G+VF N ++R+ S    + KK          RM  D R VN        PMP LE +   + GA VF  LD  + YWQ+ L   +QE+FT +T +G+YTPTRVP G  ++ +Y QG + ++    LG     W+DDI  +A +  EL++ L  VL R +  G+   A K   F  ++ WCGKM S A   H P+R Q L   +  QT  +                   R  S L          AG  + V+  K P  ++ G  + +        A+         P P    C YT   Q          E G  +    + H    A  + R                G   RW  ++KEAYAIV         L    G   + DHRNL YIF P                       ++ Y I H+ GE N WGDL SRW
Sbjct:  439 LDSKLAAARAKGLSAMGVKRLREILLRRQ-DSFRLEFGCDPPVKVAPLQVRVKVNAQPTKAQPRRYSPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPSADPRMTIDTRGVNERTEAMPWPMPVLEVVLGALEGAKVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDRLGNGILAWLDDILGYAESEDELLQLLDQVLARCEAYGLKLHAKKCEFFEIDVKWCGKMVSAAGVRHCPDRGQGLVEMQPPQTAGDLQQFLCAMNWMRQSIPEYNRLTSGLYAVLEEAMKAAGSRKKVKLAKFP-LDQIGWGDPQLADLAAVKAALLKMVPLAHPSPTAEVCLYTDASQDSWGAVATQLEPGEVQLPLEQQHHHPLAFLSGR--------------FVGTSSRWPTIEKEAYAIVEATRRLEYLLLRPGGFRLYTDHRNLVYIFAPYGPDTAIARYQADKLQRWALSLLSFTYVIEHVPGEANVWGDLLSRW 952          
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: H3H4S7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4S7_PHYRM)

HSP 1 Score: 191 bits (484), Expect = 4.550e-49
Identity = 164/532 (30.83%), Postives = 225/532 (42.29%), Query Frame = 1
Query:    1 LESAIEEARTEGLPPNGVAELRKIVMNSHFHAFRWALSGDPPADMKPLRVHVPADARAARARPRPMSRDKAEWLNDHFTKLAQAGMVFANPQARFGSVAMAMPKK-------VTYRMVADYRAVNNLIAPSAMPMPNLEEIG*GMAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRRQTG*ERRCQS*L*C--WR--------------HF*TTRAGR--GVRR-----------TK*P*QEKTGQRNARRXXXXXXS-ASPRP----CRYTIRGQT---VVC*SFLTQEIGFGEAA*RRYHRRN*AQAATRRK*VMSR*NF*VKHSRGPQRRWSGVDKEAYAIV---------LTFWDGAHTFCDHRNLAYIFHPEA----------------------YAYTIVHISGELNSWGDLFSRW 1371
            LES +E A   GL  +G A+LR I +     +FR     DPP  + P++V +   A   RA+PR  S +   +L+ H T L + G++F N ++R+ S    + KK          RM  D R+VN    P   PMP LE +   + GA VF  LD  + YWQ+ L P +QEI++ VT +G+YTPTRVP G  ++ +Y QG + ++   LLG     W+DDI  +A     L+  L  VLER +  G+   A K + F  E+ WCG+M S     H PER+Q L   +        Q  L    W               +    RA +  G R+                 E  G    R         A P P    C Y+         V      +E+    A     H R  A  + R                G  +RW  ++KEA+AIV         L    G H F DHRNL YIF+P A                      + Y I H+ GE N+WGDL SRW
Sbjct:  614 LESKVEIATRMGLTLDGSAKLRGI-LQMRADSFRLEFGHDPPVRVAPMQVRLKPGATPIRAQPRRYSPNDRAFLDRHTTTLMKHGLIFKNHRSRWASAPRIVKKKEQADDPLADPRMTIDTRSVNERTEPMPWPMPVLEVVIGELEGAKVFFVLDWFRGYWQLPLHPDSQEIYSFVTHRGIYTPTRVPMGATDAVAYCQGVVEEIFGDLLGTCILAWLDDILGYAEDEASLLEVLDKVLERCEKFGLKLHAKKCQFFATEVKWCGRMISAQGVRHCPERIQGLVEMQAPQTAGDLQQFLCAVNWMRQSIPEFTRITAVLYDALDRAAQIAGSRKKVKLARVRLEDVSWGADEMAGVEAVRDALLNMVPLAHPSPTADLCLYSDASNDYWGAVVTMLDPEELKLPRA---EQHHRPLAFLSGR--------------FVGAAQRWPTIEKEAFAIVEAVRRLEYLLLRPRGFHLFTDHRNLVYIFNPYATDGMMARYQADKLQRWALALMSFRYVIEHVPGEENAWGDLLSRW 1127          
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A6A3FJ70_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3FJ70_9STRA)

HSP 1 Score: 190 bits (483), Expect = 4.730e-49
Identity = 147/509 (28.88%), Postives = 223/509 (43.81%), Query Frame = 1
Query:   13 IEEARTEGLPPNGVAELRKIVMNSHFHAFRWALSGDPPADMKPLRVHVPADARAARARPRPMSRDKAEWLNDHFTKLAQAGMVFANPQARFGSVAMAMPK---KVTYRMVADYRAVNNLIAPSAMPMPNLEEIG*GMAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRRQTG*ERRCQS*L*C--WRHF*TTRAGRGVRRTK*P*QEKTGQ---------RNARRXXXXXXSASPRPCRYTIR------------GQTVVC*SFLTQEIGFGEAA*--RRYHRRN*AQAATRRK*VMSR*NF*VKHSRGPQRRWSGVDKEAYAIVLTFWD---------GAHTFCDHRNLAYIFHPE-------------------AYAYTIVHISGELNSWGDLFSRW 1371
            I++A   G PP  ++ LR  V++ +   +R  L  D PA ++P  V +  DA   R +PR  S  ++++L  H  +L Q G+V  N  +R+   A+ + K   K  +R+  DYR VN +  P A  +PNL  +   + GA      D+ + +WQ+ LD  +QEIF++ T +GVYTPTRVPQG ++S  +FQ TM +V   ++     V+VDD+ ++A T  E +  L     RL+   +     K+ L+ + + WCGK+  G+   HDP RV  L +          Q  L    W        GR V     P QEK  +         R+A        SA  +  +  +                 VC S    + G+       R ++             +    +F     +GPQ  WS ++KE+Y IVL   +         G   FCDH NL  +F P                     Y+Y I HI+G  N W D+ SRW
Sbjct:   40 IQDAEANGFPPRMMSSLRTTVLD-YGDVWRARLGADGPARVRPYSVKLKPDAIPFRCKPRRYSPLQSDFLRSHVAELQQFGLVRLNNASRWACAAVPVRKAGLKDAFRLTTDYRPVNRMTVPIAAAVPNLVVVTSRVRGAQAMAKFDMFKGFWQLPLDEDSQEIFSIKTDEGVYTPTRVPQGAVDSAMHFQSTMQEVFGDMMNHNLLVYVDDVVLYAPTHDEFLVVLEKFFRRLRESNLKLNVSKSELYAQAVTWCGKIVDGSGVIHDPSRVNALQTLPLPTNAGELQYFLCAANWLRDSIVDYGRAVA----PLQEKFDEVMAGHNRKKRHAVSVAVTWTSAEEQAYKAFLDRIASSVTLSFPDDDATVCLSTDASDRGWAVIVTQVRDWNSEVPMHEQCHELLICKGGSF-----KGPQLNWSVIEKESYPIVLACTELEYLLQRAQGFRIFCDHSNLIQVFCPSKEVKQHVRGKLQRWTMKLIGYSYDIEHINGTDNHWADMVSRW 538          
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A2P4WWJ1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WWJ1_9STRA)

HSP 1 Score: 189 bits (481), Expect = 7.430e-49
Identity = 158/521 (30.33%), Postives = 221/521 (42.42%), Query Frame = 1
Query:    1 LESAIEEARTEGLPPNGVAELRKIVMNSHFHAFRWALSGDPPADMKPLRVHVPADARAARARPRPMSRDKAEWLNDHFTKLAQAGMVFANPQARFGSVAMAMPKK-------VTYRMVADYRAVNNLIAPSAMPMPNLEEIG*GMAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRRQTG*ERRCQS*L*C--WRH-----F*TTRAG---------------RGVRRTK*P*QEKTGQRNARRXXXXXXSA---------SPRP----CRYTIRGQTVVC*SFLTQEIGFGEAA*RRYHRRN*AQAATRRK*VMSR*NF*VKHSRGPQRRWSGVDKEAYAIVLTFWDGAHTFCDHRNLAYIFHPE----------------------AYAYTIVHISGELNSWGDLFSRW 1371
            L+S +  AR +GL   GV  LR+I++     +FR     DPP  + PL+V V  +A+  +A+PR  S +   +L+ H  KL + G+V  N ++R+ S    + KK          RM  D R VN        PMP LE +   + GA VF  LD  + YWQ+ L   +QE+FT +T +G+YTPTRVP G  ++ +Y QG + ++   LLG    VW+DDI  +A + +EL++ L  VL R +  G+   A K   F  E+ WCGKM S A   H P+RVQ L   + +      Q  L    W       +    AG               + V+  K P  +K G  + +        A          P P    C YT   Q          E G  +    + H R  A  + R                G   RW  ++KEAYA               RNL YIF P                       ++ Y I H+ GE N WGDL SRW
Sbjct:  396 LDSKLAAARAKGLSAKGVKRLREILLRRQ-DSFRLEFGSDPPVKVAPLQVRVKVNAQPTKAQPRRYSSNDKAFLDRHTAKLQEFGLVSLNHRSRWASAPRIVRKKEQGSDPTADPRMTIDTRGVNERTEAMPWPMPVLEVVLSALEGAQVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDLLGNGILVWLDDILGYAESEEELLQLLDQVLARCEAYGLKLHAKKCDFFEIEVKWCGKMVSAAGVRHYPDRVQGLVEMQPSQTAGDLQQFLCAVNWMRQSIPEYNRLTAGLHAVLEEAMKAAGSRKKVKLAKFP-LDKIGWGDPQLADLAAVKAVLLEMVPLAHPSPTAEVCLYTDASQDSWGAVATQLEPGEVQLPLEQQHHRPLAFLSGR--------------FVGASSRWPTIEKEAYA---------------RNLVYIFAPYGSDTAMARCQADKLRRWALSLLSFTYVIEHVPGETNVWGDLLSRW 885          
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A6G0Q6C3_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0Q6C3_9STRA)

HSP 1 Score: 182 bits (463), Expect = 6.220e-48
Identity = 150/523 (28.68%), Postives = 230/523 (43.98%), Query Frame = 1
Query:    1 LESAIEEARTEGLPPNGVAELRKIVMNSHFHAFRWALSGDPPADMKPLRVHVPADARAARARPRPMSRDKAEWLNDHFTKLAQAGMVFANPQARFGSVAMAMPK---KVTYRMVADYRAVNNLIAPSAMPMPNLEEIG*GMAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRRQTG*ERRCQS*L*C--WRHF*TTRAGRGVRRTK*P*QEKTG---QRNARRXXXXXXSA---------------------------SPRPCRYTIRGQTVVC*SFLTQEIGFGEAA*---RRYHRRN*AQAATRRK*VMSR*NF*VKHSRGPQRRWSGVDKEAYAIVLTFWD---------GAHTFCDHRNLAYIFHPEA-------------------YAYTIVHISGELNSWGDLFSRW 1371
            L+  ++EA   G+P   V  LR +V   H H        DPPA ++PL+V +  DA   R +PR  +  ++ +L ++  +L + G +  N  A++   A+ + K   +  +R+  DYR VN +  P A  MPNL  +   + GA  F   D+++ +WQ+ LD   QE+ + +T   VYTPTRVPQG ++S  +FQ  M D +A +L +   VWVDD+ I+A T +E ++ L+     L+ R +  +A K+ LF+ E  WCGK+ SG+   HDPERV  L++          Q  +    W H       R V     P QE+ G   +R  RR       A                           SP      +   ++   S +  E+   + +    ++ HR    +  T                +  Q  W+ V+KEA+ IV    D         G   FCDH NL Y+F P                       +TI H++GE N W D+ SRW
Sbjct:   67 LDQLVDEALANGMPGEHVDRLRSLV---HEHG------DDPPALVEPLKVTLADDAVPFRCKPRKYAPLQSAFLREYTAELEKRGFIRKNNAAKWACAAVPVRKPGSQTEFRITIDYRPVNKVTVPIAGAMPNLAVVSSSVRGAKCFAKFDMIKGFWQLPLDVDRQELMSFMTEDTVYTPTRVPQGAVDSAIHFQ--MQDAMAPMLQRNALVWVDDVIIFAPTVEEFLQALKEFFIILRDRRLKLSAAKSSLFQLEALWCGKLISGSGVRHDPERVDALSALPVPSTVAELQYFVCASNWLHDSLPDYARVVA----PLQERLGLERKRIGRRNKNALNVAVTLTKAEVTSYNEVKTLIKASVPLVFPSPTSELVVMTDASLTGWSIVVTEVQAWDDSLPVDKQQHRMVLCKGGT---------------FKDSQLNWAIVEKEAFPIVKACTDLEYLLQRERGFKLFCDHANLIYVFAPHVELKKHVRDRLQRWAMRLCGLRFTIEHVAGETNVWADIVSRW 559          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE9.470e-7535.70Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE9.520e-7336.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A4C7W4_9STRA2.520e-5129.45RNA-directed DNA polymerase (Fragment) n=3 Tax=Phy... [more]
A0A2P4Y094_9STRA4.750e-5130.77Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A6G0MLJ8_9STRA2.860e-5030.57Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A6A3Q7S3_9STRA3.840e-5030.57Uncharacterized protein n=6 Tax=Phytophthora fraga... [more]
H3H4S7_PHYRM4.550e-4930.83Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6A3FJ70_9STRA4.730e-4928.88Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A2P4WWJ1_9STRA7.430e-4930.33Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A6G0Q6C3_9STRA6.220e-4828.68Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11808contigH-paniculata_contig11808:1290..2750 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score118.2
Seed ortholog evalue3.1e-24
Seed eggNOG ortholog164328.Phyra85588
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QEWS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons3
Model size1371
Cds size441
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11808.1156.1prot_H-paniculata_contig11808.1156.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig11808 1899..2339 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928891.138999-UTR-H-paniculata_contig11808:1289..13491622928891.138999-UTR-H-paniculata_contig11808:1289..1349Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11808 1290..1349 -
1691480658.511397-UTR-H-paniculata_contig11808:1289..13491691480658.511397-UTR-H-paniculata_contig11808:1289..1349Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11808 1290..1349 -
1622928891.1521337-UTR-H-paniculata_contig11808:1418..18511622928891.1521337-UTR-H-paniculata_contig11808:1418..1851Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11808 1419..1851 -
1691480658.526223-UTR-H-paniculata_contig11808:1418..18511691480658.526223-UTR-H-paniculata_contig11808:1418..1851Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11808 1419..1851 -
1622928891.175073-UTR-H-paniculata_contig11808:1872..18981622928891.175073-UTR-H-paniculata_contig11808:1872..1898Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11808 1873..1898 -
1691480658.5357392-UTR-H-paniculata_contig11808:1872..18981691480658.5357392-UTR-H-paniculata_contig11808:1872..1898Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11808 1873..1898 -
1622928891.2224-UTR-H-paniculata_contig11808:2339..27501622928891.2224-UTR-H-paniculata_contig11808:2339..2750Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11808 2340..2750 -
1691480658.5538142-UTR-H-paniculata_contig11808:2339..27501691480658.5538142-UTR-H-paniculata_contig11808:2339..2750Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11808 2340..2750 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928891.1995814-CDS-H-paniculata_contig11808:1898..23391622928891.1995814-CDS-H-paniculata_contig11808:1898..2339Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11808 1899..2339 -
1691480658.544422-CDS-H-paniculata_contig11808:1898..23391691480658.544422-CDS-H-paniculata_contig11808:1898..2339Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11808 1899..2339 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig11808.1156.1

>prot_H-paniculata_contig11808.1156.1 ID=prot_H-paniculata_contig11808.1156.1|Name=mRNA_H-paniculata_contig11808.1156.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp
MAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNS
TSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQV
RGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRRQTG*
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mRNA from alignment at H-paniculata_contig11808:1290..2750-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig11808.1156.1 ID=mRNA_H-paniculata_contig11808.1156.1|Name=mRNA_H-paniculata_contig11808.1156.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1461bp|location=Sequence derived from alignment at H-paniculata_contig11808:1290..2750- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTGGAGTCGGCGATAGAAGAGGCGAGGACCGAGGGTTTGCCGCCAAACGG AGTCGCGGAGTTGAGGAAAATTGTGATGAACTCCCACTTCCATGCGTTTC GGTGGGCGCTGAGCGGGGATCCACCGGCGGACATGAAACCGCTGCGGGTA CATGTACCCGCGGACGCTCGAGCCGCCCGGGCGCGGCCGCGCCCGATGTC GCGCGACAAGGCGGAATGGTTGAATGATCATTTCACGAAGCTGGCACAGG CAGGTATGGTGTTCGCAAATCCCCAGGCAAGGTTCGGCAGCGTGGCGATG GCAATGCCCAAGAAGGTCACCTATCGAATGGTGGCCGACTACCGCGCAGT AAACAACCTGATCGCGCCCTCGGCGATGCCGATGCCAAACTTGGAGGAGA TCGGGTGAGGCATGGCGGGAGCCAGCGTGTTCTGTACGCTGGATCTGCTG CAGGACTACTGGCAGATGCTCCTCGACCCTCAAGCGCAAGAGATCTTCAC GATGGTCACGGCCAAGGGGGTATACACGCCTACCAGAGTTCCTCAGGGAG TGCTAAATTCGACTAGTTATTTCCAGGGGACGATGGGAGACGTACTGGCA GGGTTGCTCGGAAAAGTCTGTGAAGTATGGGTTGATGATATAGGAATATG GGCCGGTACGTGGCAGGAACTGATGCGGAGACTGCGGGTGGTGCTGGAGC GGCTACAGGTACGCGGTATTTATGCCACGGCTCACAAGGCGAGGCTTTTT CGGCGGGAGATGCACTGGTGCGGGAAAATGTACTCGGGCGCGACGGCCTC CCATGATCCGGAGCGAGTACAGGATTTGGCCTCCAGGCGTCAAACTGGAT GAGAACGTCGGTGCCAGAGCTGACTGTGGTGGTGGAGCCTCTGCGTTAGA TGCTGGAGACATTTCTGAACAACACGCGCCGGACGCGGCGTGCGGCGGAC AAAATAACCATAACAAGAGAAGACTGGACAGAGGAACGCGCGGCGGCGTC GGAGACGGCGACGGAGCGCGTCTCCGAGGCCGTGCCGCTATACCATCCGC GGGCAGACCGTAGTGTGCTGATCGTTCCTGACGCAAGAGATAGGTTTTGG AGAAGCTGCGTGACGCAGGTACCACCGGAGAAACTGAGCGCAGGCGGCGA CGAGGCGGAAATGAGTCATGAGCCGCTAGAATTTTTGAGTGAAGCATTCA AGGGGGCCACAGCGGAGGTGGTCGGGGGTGGATAAGGAGGCGTATGCCAT CGTGTTAACGTTCTGGGACGGGGCGCATACATTCTGCGACCATCGGAATC TGGCATACATTTTTCATCCAGAGGCATACGCGGTGCCCACCACGTCTAAG GCCACGGCCCAGCGGCTGCAGCGGTGGAGCGCTTTTCTTGGACAATTTCA GTACACCATCGTGCACATCTCCGGGGAACTGAATAGTTGGGGAGATTTAT TCTCGAGGTGG
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Coding sequence (CDS) from alignment at H-paniculata_contig11808:1290..2750-

>mRNA_H-paniculata_contig11808.1156.1 ID=mRNA_H-paniculata_contig11808.1156.1|Name=mRNA_H-paniculata_contig11808.1156.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=882bp|location=Sequence derived from alignment at H-paniculata_contig11808:1290..2750- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGGGAGCCAGCGTGTTCTGTACGCTGGATCTGCTGCAGGACTACTG
GCAGATGCTCCTCGACCCTCAAGCGCAAGAGATCTTCACGATGGTCACGG
CCAAGGGGGTATACACGCCTACCAGAGTTCCTCAGGGAGTGCTAAATTCG
ACTAGTTATTTCCAGGGGACGATGGGAGACGTACTGGCAGGGTTGCTCGG
AAAAGTCTGTGAAGTATGGGTTGATGATATAGGAATATGGGCCGGTACGT
GGCAGGAACTGATGCGGAGACTGCGGGTGGTGCTGGAGCGGCTACAGGTA
CGCGGTATTTATGCCACGGCTCACAAGGCGAGGCTTTTTCGGCGGGAGAT
GCACTGGTGCGGGAAAATGTACTCGGGCGCGACGGCCTCCCATGATCCGG
AGCGAGTACAGGATTTGGCCTCCAGGCGTCAAACTGGATGAATGGCGGGA
GCCAGCGTGTTCTGTACGCTGGATCTGCTGCAGGACTACTGGCAGATGCT
CCTCGACCCTCAAGCGCAAGAGATCTTCACGATGGTCACGGCCAAGGGGG
TATACACGCCTACCAGAGTTCCTCAGGGAGTGCTAAATTCGACTAGTTAT
TTCCAGGGGACGATGGGAGACGTACTGGCAGGGTTGCTCGGAAAAGTCTG
TGAAGTATGGGTTGATGATATAGGAATATGGGCCGGTACGTGGCAGGAAC
TGATGCGGAGACTGCGGGTGGTGCTGGAGCGGCTACAGGTACGCGGTATT
TATGCCACGGCTCACAAGGCGAGGCTTTTTCGGCGGGAGATGCACTGGTG
CGGGAAAATGTACTCGGGCGCGACGGCCTCCCATGATCCGGAGCGAGTAC
AGGATTTGGCCTCCAGGCGTCAAACTGGATGA
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