prot_H-paniculata_contig11808.1156.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11808.1156.1
Unique Nameprot_H-paniculata_contig11808.1156.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length147
Homology
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 3.950e-37
Identity = 70/144 (48.61%), Postives = 94/144 (65.28%), Query Frame = 0
Query:    1 MAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRRQ 144
            ++ A  + +LDLLQ YWQ  L P+AQEIFT+ T  G+YTP RVPQG+LN+TSYFQ T+  +L GL    C VWVDD+  W     +L+  L ++L+RL+  G+Y  AHK   F   + WCGK+YS     HDPER+  LA+ R+
Sbjct:  840 LSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILDGLN---CFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYSEGQVEHDPERLSGLATMRR 980          
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 4.120e-35
Identity = 66/144 (45.83%), Postives = 94/144 (65.28%), Query Frame = 0
Query:    1 MAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRRQ 144
            ++ A+ + +LD+LQ YW M L P+AQEIFTM+   G+Y+P RVPQGVLN+TSY+QGTM  +L  L    C VWVDDI  W  T ++L+  L ++L R +  G++  AHK   +   + WCGK+YS     HD +R+  LA+ R+
Sbjct:  742 LSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDLN---CIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSVKWCGKVYSKGVIEHDRDRLSGLANLRR 882          
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A6A4AR77_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4AR77_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.210e-29
Identity = 53/137 (38.69%), Postives = 81/137 (59.12%), Query Frame = 0
Query:    3 GASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDL 139
            G   +   D L+ +WQ+ LD  +QE  + +T KG++TPTRVPQG  ++  +FQ T+   L  L+ K   VW+DD+ ++A T +EL+  +   L +L   G+     K+ LF  E+ WCG++ S A   HDPER+Q L
Sbjct:   13 GKMFYAVFDFLKGFWQLPLDKSSQEYMSYMTDKGIFTPTRVPQGSTDAALHFQSTVEMALGDLVNKSVIVWIDDLLVFADTAEELLEAIEATLTKLDEYGLILNPKKSALFLTEVRWCGRIISKAGVGHDPERIQAL 149          
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A6G0SJ18_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0SJ18_9STRA)

HSP 1 Score: 113 bits (282), Expect = 7.900e-29
Identity = 58/137 (42.34%), Postives = 79/137 (57.66%), Query Frame = 0
Query:    3 GASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDL 139
            GA V   LD  + YWQ+ L   +QE+FT +T +G+YTPTRVP G  ++ +Y QG + ++  GLLG     W+DDI  +A +  EL+  L  VL R +  G+   A K   F  E+ WCGKM S A   H  +RVQ L
Sbjct:   31 GAKVVFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGGLLGNGILAWLDDILGYAESDDELLPLLDQVLARCEAYGLKLHAKKCEFFEIEVMWCGKMVSAAGVRHCSDRVQGL 167          
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A2P4WWJ1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WWJ1_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.570e-28
Identity = 60/137 (43.80%), Postives = 83/137 (60.58%), Query Frame = 0
Query:    3 GASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDL 139
            GA VF  LD  + YWQ+ L   +QE+FT +T +G+YTPTRVP G  ++ +Y QG + ++   LLG    VW+DDI  +A + +EL++ L  VL R +  G+   A K   F  E+ WCGKM S A   H P+RVQ L
Sbjct:  541 GAQVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDLLGNGILVWLDDILGYAESEEELLQLLDQVLARCEAYGLKLHAKKCDFFEIEVKWCGKMVSAAGVRHYPDRVQGL 677          
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A6G0NWQ3_9STRA (Reverse transcriptase domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0NWQ3_9STRA)

HSP 1 Score: 114 bits (285), Expect = 4.210e-28
Identity = 57/137 (41.61%), Postives = 79/137 (57.66%), Query Frame = 0
Query:    3 GASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDL 139
            GA V   +D  + YWQ+ L   +QE+FT +T +G+YTPTRVP G  ++ +Y QG + ++  GLLG     W+DDI  +A +  EL+  L  VL R +  G+   A K   F  E+ WCGKM S A   H  +RVQ L
Sbjct:  147 GAKVVFAMDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGGLLGNGILAWLDDIVGYAESEDELLTMLDQVLARCEAYGLKLHAKKCEFFEIEVKWCGKMVSAAGVRHCSDRVQGL 283          
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A6A3GQ28_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GQ28_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.250e-27
Identity = 54/137 (39.42%), Postives = 82/137 (59.85%), Query Frame = 0
Query:    3 GASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDL 139
            G   +   D L+ +WQ+ LD  +QE  + +T KG++TPTRVPQG  ++  +FQ T+  VL  L+ K   VW+DD+ ++A T +EL+  +   L +L   G+     K+ LF  E+ WCG++ S A   HDPER+Q L
Sbjct:  357 GKMFYAVFDFLKGFWQLPLDKSSQEYMSYMTDKGIFTPTRVPQGSTDAALHFQSTVEMVLGDLVNKSVIVWIDDLLVFADTAEELLEAIEATLTKLDEYGLILNPKKSALFLTEVRWCGRIISKAGVGHDPERIQAL 493          
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A6A4C7W4_9STRA (RNA-directed DNA polymerase (Fragment) n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4C7W4_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.410e-27
Identity = 58/139 (41.73%), Postives = 88/139 (63.31%), Query Frame = 0
Query:    3 GASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLAS 141
            GA  F   D+++ +WQ+ LD  +QE+ + +T   VYTPTRVPQG ++S  +FQ  M D +A +L +   VWVDD+ I+A T +E ++ L+     L+ R +  +A K+ LF+ E  WCGK+ SG+   HDPERV  L++
Sbjct:  607 GAKCFAKFDMIKGFWQLPLDVDSQELMSFMTEDTVYTPTRVPQGAVDSAIHFQMQMQDAMAPMLQRNALVWVDDVIIFAPTVEEFLQALKEFFIILRDRRLKLSAAKSSLFQLEALWCGKLISGSGVRHDPERVDALSA 745          
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: H3H555_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H555_PHYRM)

HSP 1 Score: 116 bits (291), Expect = 1.860e-27
Identity = 58/137 (42.34%), Postives = 80/137 (58.39%), Query Frame = 0
Query:    3 GASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDL 139
            GA VF  LD  + YWQ+ L P +QEI++ VT +G+YTPTRVP G  ++ +Y QG + ++   LLG     W+DDI  +A     L+  L  VLER +  G+   A K + F  E+ WCG+M S     H PER+Q L
Sbjct:   31 GAKVFFVLDWFRGYWQLPLHPDSQEIYSFVTHRGIYTPTRVPMGATDAVAYCQGVVEEIFGDLLGTCILAWLDDILGYAEDEASLLEVLDKVLERCEKFGLKLHAKKCQFFATEVKWCGRMISAQGVRHCPERIQGL 167          
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: H3H4S7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4S7_PHYRM)

HSP 1 Score: 116 bits (291), Expect = 1.940e-27
Identity = 58/137 (42.34%), Postives = 80/137 (58.39%), Query Frame = 0
Query:    3 GASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDL 139
            GA VF  LD  + YWQ+ L P +QEI++ VT +G+YTPTRVP G  ++ +Y QG + ++   LLG     W+DDI  +A     L+  L  VLER +  G+   A K + F  E+ WCG+M S     H PER+Q L
Sbjct:  759 GAKVFFVLDWFRGYWQLPLHPDSQEIYSFVTHRGIYTPTRVPMGATDAVAYCQGVVEEIFGDLLGTCILAWLDDILGYAEDEASLLEVLDKVLERCEKFGLKLHAKKCQFFATEVKWCGRMISAQGVRHCPERIQGL 895          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5A5_9PHAE3.950e-3748.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7F6_9PHAE4.120e-3545.83Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6A4AR77_9STRA1.210e-2938.69Reverse transcriptase domain-containing protein (F... [more]
A0A6G0SJ18_9STRA7.900e-2942.34Reverse transcriptase domain-containing protein n=... [more]
A0A2P4WWJ1_9STRA1.570e-2843.80Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A6G0NWQ3_9STRA4.210e-2841.61Reverse transcriptase domain-containing protein n=... [more]
A0A6A3GQ28_9STRA1.250e-2739.42Reverse transcriptase domain-containing protein (F... [more]
A0A6A4C7W4_9STRA1.410e-2741.73RNA-directed DNA polymerase (Fragment) n=3 Tax=Phy... [more]
H3H555_PHYRM1.860e-2742.34Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
H3H4S7_PHYRM1.940e-2742.34Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10coord: 17..49
e-value: 1.0E-26
score: 95.6
NoneNo IPR availableGENE3D3.30.70.270coord: 1..122
e-value: 1.0E-26
score: 95.6
NoneNo IPR availablePANTHERPTHR33064FAMILY NOT NAMEDcoord: 3..140
NoneNo IPR availablePANTHERPTHR33064:SF25coord: 3..140
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 2..140
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 9..121
e-value: 7.6E-9
score: 35.4
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..124
score: 11.766

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11808contigH-paniculata_contig11808:1899..2339 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11808.1156.1mRNA_H-paniculata_contig11808.1156.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11808 1290..2750 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11808.1156.1 ID=prot_H-paniculata_contig11808.1156.1|Name=mRNA_H-paniculata_contig11808.1156.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp
MAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNS
TSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQV
RGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRRQTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom