mRNA_H-paniculata_contig4624.11556.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4624.11556.1 vs. uniprot
Match: D7FRY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRY1_ECTSI) HSP 1 Score: 120 bits (301), Expect = 1.340e-32 Identity = 56/58 (96.55%), Postives = 58/58 (100.00%), Query Frame = 1
Query: 1 RGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALVLDPVIAS 174
RGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVAL+LDP+IAS
Sbjct: 84 RGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIAS 141
BLAST of mRNA_H-paniculata_contig4624.11556.1 vs. uniprot
Match: A0A835YL27_9STRA (Uracil phosphoribosyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL27_9STRA) HSP 1 Score: 102 bits (253), Expect = 3.550e-25 Identity = 44/58 (75.86%), Postives = 55/58 (94.83%), Query Frame = 1
Query: 1 RGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALVLDPVIAS 174
RGGLGMT+A+LELLP++PVYH+GMYRNPGS++P+QYYNRLPKG DVA++LDP+IAS
Sbjct: 100 RGGLGMTDAMLELLPNAPVYHIGMYRNPGSSMPIQYYNRLPKGQSCDVAILLDPIIAS 157
BLAST of mRNA_H-paniculata_contig4624.11556.1 vs. uniprot
Match: A0A7S2S8E3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8E3_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 4.170e-17 Identity = 37/58 (63.79%), Postives = 48/58 (82.76%), Query Frame = 1
Query: 1 RGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALVLDPVIAS 174
R GLGM + +LELLP++ V+H+GMYR GS+IPVQYYNRLP+ +DV+ VLDP+IAS
Sbjct: 81 RAGLGMVDGMLELLPNAAVHHIGMYRMQGSDIPVQYYNRLPRDAVADVSFVLDPLIAS 138
BLAST of mRNA_H-paniculata_contig4624.11556.1 vs. uniprot
Match: A0A7R9WS49_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WS49_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 2.230e-16 Identity = 39/58 (67.24%), Postives = 48/58 (82.76%), Query Frame = 1
Query: 1 RGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALVLDPVIAS 174
R GLGM++++LELLP + VYH+GMYR PGS PVQY+NRLP+ SD A+VLDPVIAS
Sbjct: 130 RSGLGMSDSMLELLPKASVYHIGMYRIPGS-APVQYFNRLPRKCASDAAIVLDPVIAS 186
BLAST of mRNA_H-paniculata_contig4624.11556.1 vs. uniprot
Match: A0A3M6VGI5_9STRA (Uracil phosphoribosyltransferase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VGI5_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 6.950e-16 Identity = 35/58 (60.34%), Postives = 47/58 (81.03%), Query Frame = 1
Query: 1 RGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALVLDPVIAS 174
R GLGM E +L++LPD+ V+H+GMYRN S +PVQYYN+LPK DVA++L+PVIA+
Sbjct: 94 RAGLGMVEPMLDVLPDATVHHIGMYRNKQSLVPVQYYNKLPKECNVDVAIILEPVIAT 151
BLAST of mRNA_H-paniculata_contig4624.11556.1 vs. uniprot
Match: A0A8K1CH49_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CH49_PYTOL) HSP 1 Score: 77.0 bits (188), Expect = 9.300e-16 Identity = 36/58 (62.07%), Postives = 47/58 (81.03%), Query Frame = 1
Query: 1 RGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALVLDPVIAS 174
R GLGM E +L+LLP++ V+H+GMYRN S +PVQYYN+LPK DVA+VL+PVIA+
Sbjct: 94 RAGLGMVEPMLDLLPNAAVHHIGMYRNKHSLLPVQYYNKLPKQCDLDVAIVLEPVIAT 151
BLAST of mRNA_H-paniculata_contig4624.11556.1 vs. uniprot
Match: G4ZCN1_PHYSP (Uracil phosphoribosyltransferase (Fragment) n=12 Tax=Phytophthora TaxID=4783 RepID=G4ZCN1_PHYSP) HSP 1 Score: 76.6 bits (187), Expect = 1.060e-15 Identity = 35/58 (60.34%), Postives = 48/58 (82.76%), Query Frame = 1
Query: 1 RGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALVLDPVIAS 174
R GLGM E +L++LP++ V+H+GMYRN S +PVQYYN+LPK +DVA+VL+PVIA+
Sbjct: 94 RAGLGMVEPMLDVLPNATVHHIGMYRNKQSLLPVQYYNKLPKECNADVAIVLEPVIAT 151
BLAST of mRNA_H-paniculata_contig4624.11556.1 vs. uniprot
Match: A0A5D6XMY6_9STRA (Uracil phosphoribosyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMY6_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 1.320e-15 Identity = 36/58 (62.07%), Postives = 47/58 (81.03%), Query Frame = 1
Query: 1 RGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALVLDPVIAS 174
R GLGM E +L+LLP++ V+H+GMYRN S +PVQYYN+LPK DVA+VL+PVIA+
Sbjct: 94 RAGLGMVEPMLDLLPNATVHHIGMYRNKHSLLPVQYYNKLPKECNVDVAIVLEPVIAT 151
BLAST of mRNA_H-paniculata_contig4624.11556.1 vs. uniprot
Match: A0A7S0AQP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AQP2_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.370e-15 Identity = 38/58 (65.52%), Postives = 48/58 (82.76%), Query Frame = 1
Query: 1 RGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALVLDPVIAS 174
R GLGMTE++LELLP++ V+H+GMYR + +PVQYYNRLPK SDVA VLDPV+A+
Sbjct: 79 RSGLGMTESMLELLPNAGVHHIGMYRQ--NLMPVQYYNRLPKKCESDVAYVLDPVMAT 134
BLAST of mRNA_H-paniculata_contig4624.11556.1 vs. uniprot
Match: A0A7S3P6D6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P6D6_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 1.670e-15 Identity = 35/58 (60.34%), Postives = 46/58 (79.31%), Query Frame = 1
Query: 1 RGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALVLDPVIAS 174
R GLGM +A+LELLP++ ++H+GMY+ PG + PVQY+NRLPK DVA VLDP IA+
Sbjct: 103 RSGLGMVDAMLELLPNAEIHHIGMYKAPGQSHPVQYFNRLPKKCTVDVAYVLDPCIAT 160 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4624.11556.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4624.11556.1 >prot_H-paniculata_contig4624.11556.1 ID=prot_H-paniculata_contig4624.11556.1|Name=mRNA_H-paniculata_contig4624.11556.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=53bp MTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALVLDPVback to top mRNA from alignment at H-paniculata_contig4624:15026..15199+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4624.11556.1 ID=mRNA_H-paniculata_contig4624.11556.1|Name=mRNA_H-paniculata_contig4624.11556.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=174bp|location=Sequence derived from alignment at H-paniculata_contig4624:15026..15199+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4624:15026..15199+ >mRNA_H-paniculata_contig4624.11556.1 ID=mRNA_H-paniculata_contig4624.11556.1|Name=mRNA_H-paniculata_contig4624.11556.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=318bp|location=Sequence derived from alignment at H-paniculata_contig4624:15026..15199+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |