mRNA_H-paniculata_contig11808.1156.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE) HSP 1 Score: 265 bits (678), Expect = 9.470e-75 Identity = 186/521 (35.70%), Postives = 249/521 (47.79%), Query Frame = 1 Query: 1 LESAIEEARTEGLPPNGVAELRKIVMNSHFHAFRWALSGDPPADMKPLRVHVPADARAARARPRPMSRDKAEWLNDHFTKLAQAGMVFANPQARFGSVAMAMPK----KVTYRMVADYRAVNNLIAPSAMPMPNLEEIG*GMAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRR--QTG*ER---------------RCQS*L*CWRHF*TTRAGRGVRRTK*P*QEKTGQRNARRXXXXXXSASPRPCRYTIRGQTVVC*SFLTQEIGFGEAA*RRYHRRN*AQAATRRK*VMSR*NF*V-----KHS---------RGPQRRWSGVDKEAYAIVLTF-------WDGAHTFCDHRNLAYIFHPEA----------------------YAYTIVHISGELNSWGDLFSRW 1371 L+ A++ A GL P G+ LR++V + F+ FR + GDPPA++ P+ V + A+ +AR R + DK +WL L G+V+ N QA + S M PK KVTYR V D+RAVN I S PMP+LE ++ A+ + +LD+LQ YW M L P+AQEIFTM+ G+Y+P RVPQGVLN+TSY+QGTM +L L C VWVDDI W T ++L+ L ++L R + G++ AHK + + WCGK+YS HD +R+ LA+ R +T E R + R F RTK R A + +P R Q +V + G+A + + + S + V H RG Q RW+ VDKE +AI+ TF W G H DHRNLAYIF PEA Y YTI HISGE N WGDL SRW Sbjct: 602 LDRAVDSAADAGLSPWGLDRLRQVV-DRRFNVFRRGVRGDPPANVPPMTVKLKTGAKPVKARLRTYNPDKTKWLTTCLAALVALGLVYVNLQAIWASAIMLTPKRSGDKVTYRFVGDFRAVNRQIEKSPGPMPDLEADMQRLSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDLN---CIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSVKWCGKVYSKGVIEHDRDRLSGLANLRRPETAGELMQFLQAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTK---------RVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKAVLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRW 1109
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE) HSP 1 Score: 259 bits (663), Expect = 9.520e-73 Identity = 190/524 (36.26%), Postives = 244/524 (46.56%), Query Frame = 1 Query: 1 LESAIEEARTEGLPPNGVAELRKIVMNSHFHAFRWALS-GDPPADMKPLRVHVPADARAARARPRPMSRDKAEWLNDHFTKLAQAGMVFANPQARFGSVAMAMPKKVTYRMVADYRAVNNLIAPSAMPMPNLEEIG*GMAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRRQTG*ERRCQS*L*C--WRHF*TTRAGRGVRRTK*P*QE------KTGQRNARRXXXXXXSASPRPCRYTIRGQTVVC*-------------------------SFLTQ----EIGFGEAA*RRYHRRN*AQAATRRK*VMSR*NF*VKHSRGPQRRWSGVDKEAYAIVLTF-------WDGAHTFCDHRNLAYIFHPEA----------------------YAYTIVHISGELNSWGDLFSRW 1371 L+SA+ A GL V LR I+ + ++AFR L GDPPA+++PLRV + AR +ARPR + K WL A G+VF N QA + S AMA PKK YR+V+D+RA N + MPN E ++ A + +LDLLQ YWQ L P+AQEIFT+ T G+YTP RVPQG+LN+TSYFQ T+ +L GL C VWVDD+ W +L+ L ++L+RL+ G+Y AHK F + WCGK+YS HDPER+ LA+ R+ L W R V + ++ +R A + +P Q +V SFLTQ ++ G H + T Q+RW+ VDKE YAIV TF WD H F DHRNLAYIF PEA Y YTI HISGE N WGDL SRW Sbjct: 710 LDSAVSSAAAAGLEEPHVGRLRGII-SERWNAFRRGLRHGDPPANVEPLRVTLKPGARPVKARPRVYNPIKTAWL-------AGLGLVFLNMQAVWASAAMATPKKGGYRLVSDFRAANKQVEKVPGVMPNPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILDGLN---CFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALSHPSPGCAVLMFPDASDEHWGSFLTQVPQDQLDRGVPVEDMAHEPMGFLSGT--------------FKGAQQQRWATVDKEGYAIVSTFKRLEYLLWDSVHIFTDHRNLAYIFDPEACVSAVAKTTAQRLDQWKAVLGQYDYTIRHISGERNCWGDLLSRW 1208
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A6A4C7W4_9STRA (RNA-directed DNA polymerase (Fragment) n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4C7W4_9STRA) HSP 1 Score: 197 bits (501), Expect = 2.520e-51 Identity = 154/523 (29.45%), Postives = 234/523 (44.74%), Query Frame = 1 Query: 1 LESAIEEARTEGLPPNGVAELRKIVMNSHFHAFRWALSGDPPADMKPLRVHVPADARAARARPRPMSRDKAEWLNDHFTKLAQAGMVFANPQARFGSVAMAMPK---KVTYRMVADYRAVNNLIAPSAMPMPNLEEIG*GMAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRRQTG*ERRCQS*L*C--WRHF*TTRAGRGVRRTK*P*QEKTG---QRNARRXXXXXXSA---------------------------SPRPCRYTIRGQTVVC*SFLTQEIGFGEAA*---RRYHRRN*AQAATRRK*VMSR*NF*VKHSRGPQRRWSGVDKEAYAIVLTFWD---------GAHTFCDHRNLAYIFHPEA-------------------YAYTIVHISGELNSWGDLFSRW 1371 L+ ++EA G+P V LR +V + H FR L DPPA ++PL+V + DA R +PR + ++ +L ++ +L + G + N A++ A+ + K + +R+ DYR VN + P A MPNL + + GA F D+++ +WQ+ LD +QE+ + +T VYTPTRVPQG ++S +FQ M D +A +L + VWVDD+ I+A T +E ++ L+ L+ R + +A K+ LF+ E WCGK+ SG+ HDPERV L++ Q + W H R V P QE+ G +R RR A SP I ++ S + E+ + + ++ HR + T + Q W+ V+KEA+ IV D G FCDH NL YIF P +TI H++GE N W D+ SRW Sbjct: 466 LDQLVDEALANGMPGEHVDRLRSLV-HEHGDVFRERLGDDPPALVEPLKVTLADDAVPFRCKPRKYAPLQSAFLREYTAELEKRGFIRKNNAAKWACAAVPVRKPGSQTEFRITIDYRPVNKVTVPIAGAMPNLAVVSSSVRGAKCFAKFDMIKGFWQLPLDVDSQELMSFMTEDTVYTPTRVPQGAVDSAIHFQMQMQDAMAPMLQRNALVWVDDVIIFAPTVEEFLQALKEFFIILRDRRLKLSAAKSSLFQLEALWCGKLISGSGVRHDPERVDALSALPVPSTVAELQYFVCASNWLHDSLPDYARVVA----PLQERLGLERKRIGRRNKNALNVAVTLTKAEVTSYNEVKTLIKASVPLVFPSPTSELVVITDASLTGWSIVVTEVQAWDDSLPVDKQQHRMVLCKGGT---------------FKDSQLNWAIVEKEAFPIVKACTDLEYLLQRERGFKLFCDHANLIYIFAPHVELKKHVRDRLQRWAMRLCGLRFTIEHVAGETNVWADIVSRW 968
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A2P4Y094_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y094_9STRA) HSP 1 Score: 196 bits (499), Expect = 4.750e-51 Identity = 156/507 (30.77%), Postives = 215/507 (42.41%), Query Frame = 1 Query: 1 LESAIEEARTEGLPPNGVAELRKIVMNSHFHAFRWALSGDPPADMKPLRVHVPADARAARARPRPMSRDKAEWLNDHFTKLAQAGMVFANPQARFGSVAMAMPKK-------VTYRMVADYRAVNNLIAPSAMPMPNLEEIG*GMAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRRQTG*ERRCQS*L*C--WRHF*TTRAGR---GVRRTK*P*QEKTGQRNARRXXXXXXS-------------------------ASPRP----CRYTIRGQTVVC*SFLTQEIGFGEAA*RRYHRRN*AQAATRRK*VMSR*NF*VKHSRGPQRRWSGVDKEAYAIV---------LTFWDGAHTFCDHRNLAYIFHPEAYAYTIVHISGELNSWGDLFSRW 1371 L+S + AR +GL GV LR+I++ +FR DPP + L+V V +A+ +A+PR S + +L+ H KL + G+VF + ++R+ S + KK RM D R VN MP LE + + G VF LD + YW + L +QE+FT +T +G+YTPTRVP G ++ +Y QG + ++ LLG W+DDI +A + EL++ L VL R + G+ A K F E+ WCGKM S A H P+RVQ L + Q L W R G+ + G R + A P P C YT Q E G + + H R A + R G RW ++KEAYAIV L G + DHRNL YIF P + Y I H+ GE N WGDL SRW Sbjct: 568 LDSKLAAARAKGLSAKGVKRLREILLRRQ-DSFRLEFGSDPPVKVAALQVRVKVNAQPTKAQPRRYSPNDRAFLDRHTAKLQEFGLVFLSHRSRWASAPRIVRKKEQDSDPTADPRMTIDTRGVNERTEAMPWSMPVLEVVLGALEGVRVFFALDWFRGYWHLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDLLGNGILAWLDDILGYAESEDELLQLLDQVLARCEAYGLKLHAKKCDFFEIEVKWCGKMVSAAGVCHCPDRVQGLVEMQPPQTAGDLQQFLCAVNWMRQSIPEYNRLTAGLHAVLEEAMKAAGSRKKVKLAKFPLDQIGWGDPQLADLAAVKAALLKMVPLAHPSPTAEVCLYTDASQDSWGAVATQLEPGEVQLPLEQQHHRPLAFLSGR--------------FVGASSRWPTIEKEAYAIVEATRRLEYLLLRPGGFRLYMDHRNLVYIFAP--FTYVIEHVPGEANVWGDLLSRW 1057
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A6G0MLJ8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0MLJ8_9STRA) HSP 1 Score: 194 bits (492), Expect = 2.860e-50 Identity = 162/530 (30.57%), Postives = 226/530 (42.64%), Query Frame = 1 Query: 1 LESAIEEARTEGLPPNGVAELRKIVMNSHFHAFRWALSGDPPADMKPLRVHVPADARAARARPRPMSRDKAEWLNDHFTKLAQAGMVFANPQARFGSVAMAMPKK-------VTYRMVADYRAVNNLIAPSAMPMPNLEEIG*GMAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRR--QTG*E------------------RRCQS*L*CWRHF*TTRAG--RGVRRTK*P*QEKTGQRNARRXXXXXXSAS---------PRP----CRYTIRGQTVVC*SFLTQEIGFGEAA*RRYHRRN*AQAATRRK*VMSR*NF*VKHSRGPQRRWSGVDKEAYAIV---------LTFWDGAHTFCDHRNLAYIFHPE----------------------AYAYTIVHISGELNSWGDLFSRW 1371 L+S + AR +GL GV LR+I++ +FR DPP + PL+V V +A+ +A+PR S D +L+ H KL + G+VF N ++R+ S + KK RM D R VN PMP LE + + GA VF LD + YWQ+ L +QE+FT +T +G+YTPTRVP G ++ +Y QG + ++ LG W+DDI +A + EL++ L VL R + G+ A K F E+ WCGKM S A H P+R Q L + QT + R + L AG + V+ K P ++ G + + A+ P P C YT Q E G + + H A + R G RW ++KEAYAIV L G + DHRNL YIF P ++ Y I H+ GE N WGDL SRW Sbjct: 304 LDSKLAAARAKGLSAMGVKRLREILLRRQ-DSFRLEFGCDPPVKVAPLQVRVKVNAQPTKAQPRRYSPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPSADPRMTIDTRGVNERTEAMPWPMPVLEVVLGALEGAKVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDRLGNGILAWLDDILGYAESEDELLQLLDQVLARCEAYGLKLHAKKCEFFEIEVKWCGKMVSAAGVRHCPDRGQGLVEMQPPQTAGDLQQFLCAMNWMRQSIPEYNRLTAGLYAVLEEAMKAAGSRKKVKLAKFP-LDQIGWGDPQLADLAAVKAALLKMVPLAHPSPTAAVCLYTDASQDSWGAVATQLEPGEVQLPLEQQHHHPLAFLSGR--------------FVGTSSRWPTIEKEAYAIVEATRRLEYLLLRPGGFRLYTDHRNLVYIFAPYGPDTAMARYQADKLQRWALSLLSFTYVIEHVPGEANVWGDLLSRW 817
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A6A3Q7S3_9STRA (Uncharacterized protein n=6 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3Q7S3_9STRA) HSP 1 Score: 194 bits (492), Expect = 3.840e-50 Identity = 162/530 (30.57%), Postives = 226/530 (42.64%), Query Frame = 1 Query: 1 LESAIEEARTEGLPPNGVAELRKIVMNSHFHAFRWALSGDPPADMKPLRVHVPADARAARARPRPMSRDKAEWLNDHFTKLAQAGMVFANPQARFGSVAMAMPKK-------VTYRMVADYRAVNNLIAPSAMPMPNLEEIG*GMAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRR--QTG*E------------------RRCQS*L*CWRHF*TTRAG--RGVRRTK*P*QEKTGQRNARRXXXXXXSAS---------PRP----CRYTIRGQTVVC*SFLTQEIGFGEAA*RRYHRRN*AQAATRRK*VMSR*NF*VKHSRGPQRRWSGVDKEAYAIV---------LTFWDGAHTFCDHRNLAYIFHPE----------------------AYAYTIVHISGELNSWGDLFSRW 1371 L+S + AR +GL GV LR+I++ +FR DPP + PL+V V +A+ +A+PR S D +L+ H KL + G+VF N ++R+ S + KK RM D R VN PMP LE + + GA VF LD + YWQ+ L +QE+FT +T +G+YTPTRVP G ++ +Y QG + ++ LG W+DDI +A + EL++ L VL R + G+ A K F ++ WCGKM S A H P+R Q L + QT + R S L AG + V+ K P ++ G + + A+ P P C YT Q E G + + H A + R G RW ++KEAYAIV L G + DHRNL YIF P ++ Y I H+ GE N WGDL SRW Sbjct: 439 LDSKLAAARAKGLSAMGVKRLREILLRRQ-DSFRLEFGCDPPVKVAPLQVRVKVNAQPTKAQPRRYSPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPSADPRMTIDTRGVNERTEAMPWPMPVLEVVLGALEGAKVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDRLGNGILAWLDDILGYAESEDELLQLLDQVLARCEAYGLKLHAKKCEFFEIDVKWCGKMVSAAGVRHCPDRGQGLVEMQPPQTAGDLQQFLCAMNWMRQSIPEYNRLTSGLYAVLEEAMKAAGSRKKVKLAKFP-LDQIGWGDPQLADLAAVKAALLKMVPLAHPSPTAEVCLYTDASQDSWGAVATQLEPGEVQLPLEQQHHHPLAFLSGR--------------FVGTSSRWPTIEKEAYAIVEATRRLEYLLLRPGGFRLYTDHRNLVYIFAPYGPDTAIARYQADKLQRWALSLLSFTYVIEHVPGEANVWGDLLSRW 952
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: H3H4S7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4S7_PHYRM) HSP 1 Score: 191 bits (484), Expect = 4.550e-49 Identity = 164/532 (30.83%), Postives = 225/532 (42.29%), Query Frame = 1 Query: 1 LESAIEEARTEGLPPNGVAELRKIVMNSHFHAFRWALSGDPPADMKPLRVHVPADARAARARPRPMSRDKAEWLNDHFTKLAQAGMVFANPQARFGSVAMAMPKK-------VTYRMVADYRAVNNLIAPSAMPMPNLEEIG*GMAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRRQTG*ERRCQS*L*C--WR--------------HF*TTRAGR--GVRR-----------TK*P*QEKTGQRNARRXXXXXXS-ASPRP----CRYTIRGQT---VVC*SFLTQEIGFGEAA*RRYHRRN*AQAATRRK*VMSR*NF*VKHSRGPQRRWSGVDKEAYAIV---------LTFWDGAHTFCDHRNLAYIFHPEA----------------------YAYTIVHISGELNSWGDLFSRW 1371 LES +E A GL +G A+LR I + +FR DPP + P++V + A RA+PR S + +L+ H T L + G++F N ++R+ S + KK RM D R+VN P PMP LE + + GA VF LD + YWQ+ L P +QEI++ VT +G+YTPTRVP G ++ +Y QG + ++ LLG W+DDI +A L+ L VLER + G+ A K + F E+ WCG+M S H PER+Q L + Q L W + RA + G R+ E G R A P P C Y+ V +E+ A H R A + R G +RW ++KEA+AIV L G H F DHRNL YIF+P A + Y I H+ GE N+WGDL SRW Sbjct: 614 LESKVEIATRMGLTLDGSAKLRGI-LQMRADSFRLEFGHDPPVRVAPMQVRLKPGATPIRAQPRRYSPNDRAFLDRHTTTLMKHGLIFKNHRSRWASAPRIVKKKEQADDPLADPRMTIDTRSVNERTEPMPWPMPVLEVVIGELEGAKVFFVLDWFRGYWQLPLHPDSQEIYSFVTHRGIYTPTRVPMGATDAVAYCQGVVEEIFGDLLGTCILAWLDDILGYAEDEASLLEVLDKVLERCEKFGLKLHAKKCQFFATEVKWCGRMISAQGVRHCPERIQGLVEMQAPQTAGDLQQFLCAVNWMRQSIPEFTRITAVLYDALDRAAQIAGSRKKVKLARVRLEDVSWGADEMAGVEAVRDALLNMVPLAHPSPTADLCLYSDASNDYWGAVVTMLDPEELKLPRA---EQHHRPLAFLSGR--------------FVGAAQRWPTIEKEAFAIVEAVRRLEYLLLRPRGFHLFTDHRNLVYIFNPYATDGMMARYQADKLQRWALALMSFRYVIEHVPGEENAWGDLLSRW 1127
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A6A3FJ70_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3FJ70_9STRA) HSP 1 Score: 190 bits (483), Expect = 4.730e-49 Identity = 147/509 (28.88%), Postives = 223/509 (43.81%), Query Frame = 1 Query: 13 IEEARTEGLPPNGVAELRKIVMNSHFHAFRWALSGDPPADMKPLRVHVPADARAARARPRPMSRDKAEWLNDHFTKLAQAGMVFANPQARFGSVAMAMPK---KVTYRMVADYRAVNNLIAPSAMPMPNLEEIG*GMAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRRQTG*ERRCQS*L*C--WRHF*TTRAGRGVRRTK*P*QEKTGQ---------RNARRXXXXXXSASPRPCRYTIR------------GQTVVC*SFLTQEIGFGEAA*--RRYHRRN*AQAATRRK*VMSR*NF*VKHSRGPQRRWSGVDKEAYAIVLTFWD---------GAHTFCDHRNLAYIFHPE-------------------AYAYTIVHISGELNSWGDLFSRW 1371 I++A G PP ++ LR V++ + +R L D PA ++P V + DA R +PR S ++++L H +L Q G+V N +R+ A+ + K K +R+ DYR VN + P A +PNL + + GA D+ + +WQ+ LD +QEIF++ T +GVYTPTRVPQG ++S +FQ TM +V ++ V+VDD+ ++A T E + L RL+ + K+ L+ + + WCGK+ G+ HDP RV L + Q L W GR V P QEK + R+A SA + + + VC S + G+ R ++ + +F +GPQ WS ++KE+Y IVL + G FCDH NL +F P Y+Y I HI+G N W D+ SRW Sbjct: 40 IQDAEANGFPPRMMSSLRTTVLD-YGDVWRARLGADGPARVRPYSVKLKPDAIPFRCKPRRYSPLQSDFLRSHVAELQQFGLVRLNNASRWACAAVPVRKAGLKDAFRLTTDYRPVNRMTVPIAAAVPNLVVVTSRVRGAQAMAKFDMFKGFWQLPLDEDSQEIFSIKTDEGVYTPTRVPQGAVDSAMHFQSTMQEVFGDMMNHNLLVYVDDVVLYAPTHDEFLVVLEKFFRRLRESNLKLNVSKSELYAQAVTWCGKIVDGSGVIHDPSRVNALQTLPLPTNAGELQYFLCAANWLRDSIVDYGRAVA----PLQEKFDEVMAGHNRKKRHAVSVAVTWTSAEEQAYKAFLDRIASSVTLSFPDDDATVCLSTDASDRGWAVIVTQVRDWNSEVPMHEQCHELLICKGGSF-----KGPQLNWSVIEKESYPIVLACTELEYLLQRAQGFRIFCDHSNLIQVFCPSKEVKQHVRGKLQRWTMKLIGYSYDIEHINGTDNHWADMVSRW 538
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A2P4WWJ1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WWJ1_9STRA) HSP 1 Score: 189 bits (481), Expect = 7.430e-49 Identity = 158/521 (30.33%), Postives = 221/521 (42.42%), Query Frame = 1 Query: 1 LESAIEEARTEGLPPNGVAELRKIVMNSHFHAFRWALSGDPPADMKPLRVHVPADARAARARPRPMSRDKAEWLNDHFTKLAQAGMVFANPQARFGSVAMAMPKK-------VTYRMVADYRAVNNLIAPSAMPMPNLEEIG*GMAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRRQTG*ERRCQS*L*C--WRH-----F*TTRAG---------------RGVRRTK*P*QEKTGQRNARRXXXXXXSA---------SPRP----CRYTIRGQTVVC*SFLTQEIGFGEAA*RRYHRRN*AQAATRRK*VMSR*NF*VKHSRGPQRRWSGVDKEAYAIVLTFWDGAHTFCDHRNLAYIFHPE----------------------AYAYTIVHISGELNSWGDLFSRW 1371 L+S + AR +GL GV LR+I++ +FR DPP + PL+V V +A+ +A+PR S + +L+ H KL + G+V N ++R+ S + KK RM D R VN PMP LE + + GA VF LD + YWQ+ L +QE+FT +T +G+YTPTRVP G ++ +Y QG + ++ LLG VW+DDI +A + +EL++ L VL R + G+ A K F E+ WCGKM S A H P+RVQ L + + Q L W + AG + V+ K P +K G + + A P P C YT Q E G + + H R A + R G RW ++KEAYA RNL YIF P ++ Y I H+ GE N WGDL SRW Sbjct: 396 LDSKLAAARAKGLSAKGVKRLREILLRRQ-DSFRLEFGSDPPVKVAPLQVRVKVNAQPTKAQPRRYSSNDKAFLDRHTAKLQEFGLVSLNHRSRWASAPRIVRKKEQGSDPTADPRMTIDTRGVNERTEAMPWPMPVLEVVLSALEGAQVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDLLGNGILVWLDDILGYAESEEELLQLLDQVLARCEAYGLKLHAKKCDFFEIEVKWCGKMVSAAGVRHYPDRVQGLVEMQPSQTAGDLQQFLCAVNWMRQSIPEYNRLTAGLHAVLEEAMKAAGSRKKVKLAKFP-LDKIGWGDPQLADLAAVKAVLLEMVPLAHPSPTAEVCLYTDASQDSWGAVATQLEPGEVQLPLEQQHHRPLAFLSGR--------------FVGASSRWPTIEKEAYA---------------RNLVYIFAPYGSDTAMARCQADKLRRWALSLLSFTYVIEHVPGETNVWGDLLSRW 885
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Match: A0A6G0Q6C3_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0Q6C3_9STRA) HSP 1 Score: 182 bits (463), Expect = 6.220e-48 Identity = 150/523 (28.68%), Postives = 230/523 (43.98%), Query Frame = 1 Query: 1 LESAIEEARTEGLPPNGVAELRKIVMNSHFHAFRWALSGDPPADMKPLRVHVPADARAARARPRPMSRDKAEWLNDHFTKLAQAGMVFANPQARFGSVAMAMPK---KVTYRMVADYRAVNNLIAPSAMPMPNLEEIG*GMAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSTSYFQGTMGDVLAGLLGKVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYATAHKARLFRREMHWCGKMYSGATASHDPERVQDLASRRQTG*ERRCQS*L*C--WRHF*TTRAGRGVRRTK*P*QEKTG---QRNARRXXXXXXSA---------------------------SPRPCRYTIRGQTVVC*SFLTQEIGFGEAA*---RRYHRRN*AQAATRRK*VMSR*NF*VKHSRGPQRRWSGVDKEAYAIVLTFWD---------GAHTFCDHRNLAYIFHPEA-------------------YAYTIVHISGELNSWGDLFSRW 1371 L+ ++EA G+P V LR +V H H DPPA ++PL+V + DA R +PR + ++ +L ++ +L + G + N A++ A+ + K + +R+ DYR VN + P A MPNL + + GA F D+++ +WQ+ LD QE+ + +T VYTPTRVPQG ++S +FQ M D +A +L + VWVDD+ I+A T +E ++ L+ L+ R + +A K+ LF+ E WCGK+ SG+ HDPERV L++ Q + W H R V P QE+ G +R RR A SP + ++ S + E+ + + ++ HR + T + Q W+ V+KEA+ IV D G FCDH NL Y+F P +TI H++GE N W D+ SRW Sbjct: 67 LDQLVDEALANGMPGEHVDRLRSLV---HEHG------DDPPALVEPLKVTLADDAVPFRCKPRKYAPLQSAFLREYTAELEKRGFIRKNNAAKWACAAVPVRKPGSQTEFRITIDYRPVNKVTVPIAGAMPNLAVVSSSVRGAKCFAKFDMIKGFWQLPLDVDRQELMSFMTEDTVYTPTRVPQGAVDSAIHFQ--MQDAMAPMLQRNALVWVDDVIIFAPTVEEFLQALKEFFIILRDRRLKLSAAKSSLFQLEALWCGKLISGSGVRHDPERVDALSALPVPSTVAELQYFVCASNWLHDSLPDYARVVA----PLQERLGLERKRIGRRNKNALNVAVTLTKAEVTSYNEVKTLIKASVPLVFPSPTSELVVMTDASLTGWSIVVTEVQAWDDSLPVDKQQHRMVLCKGGT---------------FKDSQLNWAIVEKEAFPIVKACTDLEYLLQRERGFKLFCDHANLIYVFAPHVELKKHVRDRLQRWAMRLCGLRFTIEHVAGETNVWADIVSRW 559 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11808.1156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11808.1156.1 >prot_H-paniculata_contig11808.1156.1 ID=prot_H-paniculata_contig11808.1156.1|Name=mRNA_H-paniculata_contig11808.1156.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp MAGASVFCTLDLLQDYWQMLLDPQAQEIFTMVTAKGVYTPTRVPQGVLNSback to top mRNA from alignment at H-paniculata_contig11808:1290..2750- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11808.1156.1 ID=mRNA_H-paniculata_contig11808.1156.1|Name=mRNA_H-paniculata_contig11808.1156.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1461bp|location=Sequence derived from alignment at H-paniculata_contig11808:1290..2750- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11808:1290..2750- >mRNA_H-paniculata_contig11808.1156.1 ID=mRNA_H-paniculata_contig11808.1156.1|Name=mRNA_H-paniculata_contig11808.1156.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=882bp|location=Sequence derived from alignment at H-paniculata_contig11808:1290..2750- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |