prot_H-paniculata_contig11800.1153.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11800.1153.1
Unique Nameprot_H-paniculata_contig11800.1153.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length212
Homology
BLAST of mRNA_H-paniculata_contig11800.1153.1 vs. uniprot
Match: D7FSJ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ1_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 3.140e-49
Identity = 104/158 (65.82%), Postives = 121/158 (76.58%), Query Frame = 0
Query:   54 QLRRSVATRKRHEERGYSARSRAKLLGTDDGAGGGVIRRRGRPAGRGGENNAHSGGAAGEAREMKLSLQRTRKMMAEQLERVAQVSEVMGEQDALLRDTFQQHQARGIGGTVRRARTTLHRLKAADMMDTVFMVGSTCVFFASVCFVLYQRLPTFGLL 211
            +LRR+V  RKRHEER Y A SRA LLG + G G    RRRG  +    ++    G AAG+AREMK SLQRTRKMMAEQL RVAQVSEVMGEQDALL +TF +HQ  GIGG+++RA TTL RLKAA++MDT+ MV ST VFFA+VCFV+YQRLP  GLL
Sbjct:    2 ELRRAVTLRKRHEERRYDATSRAALLGAEGGDG---PRRRGYNSXXXXDDTP--GSAAGDAREMKQSLQRTRKMMAEQLARVAQVSEVMGEQDALLMNTFAEHQ--GIGGSLKRAGTTLTRLKAAEVMDTIIMVASTFVFFATVCFVIYQRLPLLGLL 152          
BLAST of mRNA_H-paniculata_contig11800.1153.1 vs. uniprot
Match: A0A6H5JZD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZD2_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 7.740e-45
Identity = 108/167 (64.67%), Postives = 125/167 (74.85%), Query Frame = 0
Query:    1 KAFNNSSIRTVAAARDALVDARYEAEQRDG-------ETDGDA-LVTKVVQAERDLEHLRSQLRRSVATRKRHEERGYSARSRAKLLGTDDGAGGGVIRRRGRPAGRGGENNAHSGGAAGEAREMKLSLQRTRKMMAEQLERVAQVSEVMGEQDALLRDTFQQHQAR 159
            +AFNN+SIRTVAA RDAL +ARYE EQ +         TDG +  + KVVQAERDLEH+R +LRR+V  RKRHEER Y A +RA LLG + G G    RRRG  +G GG ++A  G AAG+AREMK SLQRTRKMMAEQL RVAQVSEVMGEQDALL +TF +HQAR
Sbjct:   45 EAFNNASIRTVAACRDALTEARYEGEQHEAGXXXXXXXTDGGSDSLAKVVQAERDLEHVRMELRRAVTLRKRHEERRYDATNRAALLGAECGDG---PRRRGYNSG-GGSDDA-PGSAAGDAREMKQSLQRTRKMMAEQLARVAQVSEVMGEQDALLMNTFAEHQAR 206          
BLAST of mRNA_H-paniculata_contig11800.1153.1 vs. uniprot
Match: A0A835ZB28_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB28_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 8.460e-18
Identity = 49/106 (46.23%), Postives = 74/106 (69.81%), Query Frame = 0
Query:  105 AHSGGAAGEAREMKLSLQRTRKMMAEQLERVAQVSEVMGEQDALLRDTFQQHQARGIGGTVRRARTTLHRLKAADMMDTVFMVGSTCVFFASVCFVLYQRLPTFGL 210
            A   G+  ++  +  SL R+R++MAEQ+ R++ V++++GEQD LLRDT ++H  +G+GGTV RA   L RL A  +MD V M  ST +FFA+V +V++ R+P FGL
Sbjct:  113 AEDDGSGDQSAAVASSLARSRRVMAEQVARMSSVAQLVGEQDQLLRDTAEEH--KGVGGTVGRASMLLTRLNAQAIMDAVAMAASTAMFFAAVLYVIWARVPGFGL 216          
BLAST of mRNA_H-paniculata_contig11800.1153.1 vs. uniprot
Match: K0S878_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S878_THAOC)

HSP 1 Score: 56.2 bits (134), Expect = 8.270e-7
Identity = 31/96 (32.29%), Postives = 63/96 (65.62%), Query Frame = 0
Query:  110 AAGEAREMKLSLQRTRKMMAEQLERVAQVSEVMGEQDALLRDTFQQHQARGIGGTVRRARTTLHRLKAADMMDTVFMVGSTCVFFASVCFVLYQRL 205
            A  +A+ +  SL+RT+ M++++L+RVA ++  + +  ALL +T  +H+  G+GGT++ A++T+H+L   D+ D   +  +   ++A V +VL+ R+
Sbjct:   23 ATHQAQSVTTSLRRTKDMLSQELDRVANLNTTIVDDGALLSETKDEHE--GMGGTMKGAKSTMHKLGRQDIRDAFVLRMAIVFYWACVAYVLWTRI 116          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11800.1153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FSJ1_ECTSI3.140e-4965.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZD2_9PHAE7.740e-4564.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZB28_9STRA8.460e-1846.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K0S878_THAOC8.270e-732.29Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 41..68
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 183..202
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..182
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 203..211
NoneNo IPR availableTMHMMTMhelixcoord: 184..206
IPR005606Sec20PANTHERPTHR12825BNIP1-RELATEDcoord: 15..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11800contigH-paniculata_contig11800:1768..4880 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11800.1153.1mRNA_H-paniculata_contig11800.1153.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11800 1768..4880 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11800.1153.1 ID=prot_H-paniculata_contig11800.1153.1|Name=mRNA_H-paniculata_contig11800.1153.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=212bp
KAFNNSSIRTVAAARDALVDARYEAEQRDGETDGDALVTKVVQAERDLEH
LRSQLRRSVATRKRHEERGYSARSRAKLLGTDDGAGGGVIRRRGRPAGRG
GENNAHSGGAAGEAREMKLSLQRTRKMMAEQLERVAQVSEVMGEQDALLR
DTFQQHQARGIGGTVRRARTTLHRLKAADMMDTVFMVGSTCVFFASVCFV
LYQRLPTFGLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005606Sec20