mRNA_H-paniculata_contig46073.11519.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig46073.11519.1 vs. uniprot
Match: A0A0J7K416_LASNI (Lectin receptor kinase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K416_LASNI) HSP 1 Score: 68.6 bits (166), Expect = 8.770e-12 Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = 1
Query: 13 PVRFSDIKKLAHKNLWNEAVRVEFEGLENLKAWTYVDSMRKGSNVVSARGVFAWKFDEQGNVTKPKARLVARGFSQ 240
PV + + K W EA+ E + +E WT V ++ KG +SA+ +F K DE+GNV + KARLVARG+SQ
Sbjct: 174 PVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVKNLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQ 249
BLAST of mRNA_H-paniculata_contig46073.11519.1 vs. uniprot
Match: A0A0J7KM48_LASNI (Integrase catalytic domain-containing protein n=2 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KM48_LASNI) HSP 1 Score: 68.6 bits (166), Expect = 1.090e-11 Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = 1
Query: 13 PVRFSDIKKLAHKNLWNEAVRVEFEGLENLKAWTYVDSMRKGSNVVSARGVFAWKFDEQGNVTKPKARLVARGFSQ 240
PV + + K W EA+ E + +E WT V ++ KG +SA+ +F K DE+GNV + KARLVARG+SQ
Sbjct: 549 PVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVKNLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQ 624
BLAST of mRNA_H-paniculata_contig46073.11519.1 vs. uniprot
Match: A0A5C3EBA0_9BASI (Related to Retrotransposon protein n=1 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3EBA0_9BASI) HSP 1 Score: 62.0 bits (149), Expect = 2.230e-9 Identity = 32/80 (40.00%), Postives = 47/80 (58.75%), Query Frame = 1
Query: 1 TEEPPVRFSDIKKLAHKNLWNEAVRVEFEGLENLKAWTYVDSMRKGSNVVSARGVFAWKFDEQGNVTKPKARLVARGFSQ 240
++E P + + + W EA++VE + L+N WT VD + ++A+ VF K D GNV+K KARLVARGF+Q
Sbjct: 859 SQEDPQMLAQARASPNWPKWEEAIKVELDSLDNTGTWTIVD-LPAARKAITAKWVFKTKQDADGNVSKYKARLVARGFTQ 937
BLAST of mRNA_H-paniculata_contig46073.11519.1 vs. uniprot
Match: A0A2S2NPY8_SCHGA (Copia protein (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2NPY8_SCHGA) HSP 1 Score: 60.8 bits (146), Expect = 5.530e-9 Identity = 31/76 (40.79%), Postives = 44/76 (57.89%), Query Frame = 1
Query: 13 PVRFSDIKKLAHKNLWNEAVRVEFEGLENLKAWTYVDSMRKGSNVVSARGVFAWKFDEQGNVTKPKARLVARGFSQ 240
P + + + +K WN A++ E E L K WT V + N++S + +F K D +G +TK KARLVARGFSQ
Sbjct: 63 PTTYDEAQSHPNKKEWNLAMKSEIESLYKNKTWTLVKKPQN-RNIISTKWIFKIKKDGEGQITKYKARLVARGFSQ 137
BLAST of mRNA_H-paniculata_contig46073.11519.1 vs. uniprot
Match: A0A182GGE6_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GGE6_AEDAL) HSP 1 Score: 58.5 bits (140), Expect = 3.700e-8 Identity = 31/79 (39.24%), Postives = 46/79 (58.23%), Query Frame = 1
Query: 4 EEPPVRFSDIKKLAHKNLWNEAVRVEFEGLENLKAWTYVDSMRKGSNVVSARGVFAWKFDEQGNVTKPKARLVARGFSQ 240
E+ P SD++ +NLW +A++ E + LE WT + + G + +S + +F K E G T+ KARLVARGFSQ
Sbjct: 650 EDLPESLSDLQIRDDRNLWQQAMKEEMDSLERNGTWT-LTKLPAGRSAISCKWIFKIKPGEDGQPTRYKARLVARGFSQ 727
BLAST of mRNA_H-paniculata_contig46073.11519.1 vs. uniprot
Match: A0A2G8SLM4_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8SLM4_9APHY) HSP 1 Score: 57.0 bits (136), Expect = 1.290e-7 Identity = 31/76 (40.79%), Postives = 43/76 (56.58%), Query Frame = 1
Query: 13 PVRFSDIKKLAHKNLWNEAVRVEFEGLENLKAWTYVDSMRKGSNVVSARGVFAWKFDEQGNVTKPKARLVARGFSQ 240
P ++ K+ W EA++ E E L W V+ G+N+VS R VF K D GN+++ +ARLVARGFSQ
Sbjct: 998 PASLAEAKRRPEWPRWEEAMKEEMEALAKHGTWR-VERPPLGTNIVSCRWVFHAKKDASGNISRYRARLVARGFSQ 1072
BLAST of mRNA_H-paniculata_contig46073.11519.1 vs. uniprot
Match: A0A2G8S3F3_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8S3F3_9APHY) HSP 1 Score: 57.0 bits (136), Expect = 1.300e-7 Identity = 31/76 (40.79%), Postives = 43/76 (56.58%), Query Frame = 1
Query: 13 PVRFSDIKKLAHKNLWNEAVRVEFEGLENLKAWTYVDSMRKGSNVVSARGVFAWKFDEQGNVTKPKARLVARGFSQ 240
P ++ K+ W EA++ E E L W V+ G+N+VS R VF K D GN+++ +ARLVARGFSQ
Sbjct: 1014 PASLAEAKRRPEWPRWEEAMKEEMEALAKHGTWR-VERPPLGTNIVSCRWVFHAKKDASGNISRYRARLVARGFSQ 1088
BLAST of mRNA_H-paniculata_contig46073.11519.1 vs. uniprot
Match: A0A2G8SUK6_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8SUK6_9APHY) HSP 1 Score: 56.6 bits (135), Expect = 1.780e-7 Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 1
Query: 13 PVRFSDIKKLAHKNLWNEAVRVEFEGLENLKAWTYVDSMRKGSNVVSARGVFAWKFDEQGNVTKPKARLVARGFSQ 240
P ++ K+ W EA++ E E L W ++ G+N+VS R VF K D GN+++ +ARLVARGFSQ
Sbjct: 1001 PASLAEAKRRPEWPRWEEAMKEEMEALSKHGTWR-LEHPPPGTNIVSCRWVFHAKKDASGNISRYRARLVARGFSQ 1075
BLAST of mRNA_H-paniculata_contig46073.11519.1 vs. uniprot
Match: A0A2P6P7L4_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6P7L4_ROSCH) HSP 1 Score: 56.2 bits (134), Expect = 2.350e-7 Identity = 29/72 (40.28%), Postives = 43/72 (59.72%), Query Frame = 1
Query: 25 SDIKKLAHKNLWNEAVRVEFEGLENLKAWTYVDSMRKGSNVVSARGVFAWKFDEQGNVTKPKARLVARGFSQ 240
S KK +W +A++ EF+ L N W+ V + NVVS + +F K + G++++ KARLVARGFSQ
Sbjct: 29 SSYKKAMEIPVWKQAMQEEFDALTNQGTWSLVPP-QADKNVVSCKWIFKVKKNSDGSISRQKARLVARGFSQ 99
BLAST of mRNA_H-paniculata_contig46073.11519.1 vs. uniprot
Match: UPI001E2759C6 (uncharacterized protein LOC123684598 n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E2759C6) HSP 1 Score: 55.8 bits (133), Expect = 3.260e-7 Identity = 30/77 (38.96%), Postives = 42/77 (54.55%), Query Frame = 1
Query: 4 EEPPVRFSDIKKLAHKNLWNEAVRVEFEGLENLKAWTYVDSMRKGSNVVSARGVFAWKFDEQGNVTKPKARLVARGF 234
E+ PV + + +K W EAV + LE W V+ + V+ ++ VF K DE GN++K KARLVARGF
Sbjct: 12 EDDPVSYDEAMSSENKAKWTEAVESAIKALEENDTWI-VEKNPNNAEVIDSKWVFKGKKDEAGNISKFKARLVARGF 87 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig46073.11519.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig46073.11519.1 >prot_H-paniculata_contig46073.11519.1 ID=prot_H-paniculata_contig46073.11519.1|Name=mRNA_H-paniculata_contig46073.11519.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=80bp TEEPPVRFSDIKKLAHKNLWNEAVRVEFEGLENLKAWTYVDSMRKGSNVVback to top mRNA from alignment at H-paniculata_contig46073:1266..1505+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig46073.11519.1 ID=mRNA_H-paniculata_contig46073.11519.1|Name=mRNA_H-paniculata_contig46073.11519.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=240bp|location=Sequence derived from alignment at H-paniculata_contig46073:1266..1505+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig46073:1266..1505+ >mRNA_H-paniculata_contig46073.11519.1 ID=mRNA_H-paniculata_contig46073.11519.1|Name=mRNA_H-paniculata_contig46073.11519.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=480bp|location=Sequence derived from alignment at H-paniculata_contig46073:1266..1505+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |