mRNA_H-paniculata_contig45553.11428.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig45553.11428.1
Unique NamemRNA_H-paniculata_contig45553.11428.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT)

HSP 1 Score: 273 bits (698), Expect = 1.620e-81
Identity = 151/367 (41.14%), Postives = 224/367 (61.04%), Query Frame = 1
Query:  151 LSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIPFVRRLRKSLYGLKQSGRNWNNTLD------DFLRSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSGE-KIDEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS*GSYIREVLKRYGFDGCRGVPTPVEG--KVKISAPEGRSGNSTEYRGMVGSLTYASTETRPDTAYVVHQIARRMEDPCREDFSTCKHIFRYLSSVPDLGITFGGKSNSHVPEGFVDVGWAEDIEDRKSITGYVFKLNGGAISWCSRKQQLV 1224
            L   RKA+ +KW+F+ K   DG+V  +KARLVAQGFSQ  G+D+ ET +PVAR  ++ TV  LAA+H  +L  MD+  A+LN  ++EE+++K    F    G    V RLR+S+YGLKQS R WN+ LD       F+++T D C+Y  +++ GE   ++AVYVDD+++AG  + KI+E K  +++ F+MKD+  L   LG++V     +  I I   +Y + VL+R+G +  +   TPV    K+K +A + +  +   Y+  VG L Y ST+TRPD AY V  +AR   DP  E +   K I RYL+   D+G+ + G   +    G+ D  WA D++DRKS +GYVF+++  AISW S+KQ  V
Sbjct:   19 LPENRKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQTEGFIE-KGKEHLVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCV 382          
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA)

HSP 1 Score: 265 bits (676), Expect = 4.720e-81
Identity = 154/406 (37.93%), Postives = 228/406 (56.16%), Query Frame = 1
Query:   52 LKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIP-FVRRLRKSLYGLKQSGRNWNNTLDDFLRST------TDSCLYFSRDDRGEADLLVAVYVDDLVIA-GSGEKIDEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS*GSYIREVLKRYGFDGCRGVPTPVEGKVKISAPEGRSG-------NSTEYRGMVGSLTYASTETRPDTAYVVHQIARRMEDPCREDFSTCKHIFRYLSSVPDLGITFGGKSNSHVPEGFVDVGWAEDIEDRKSITGYVFKLNGGAISWCSRKQQLV 1224
            ++  +A KW+   + E+ +L +N T E      L  GRKAI +KW+FK K   +G + RYKARLVA+GF Q  G DF ET APVA+ +++  +  +AA++   L  MD+  A+LN  +EEE+++K P  F       P  V +L+++LYGLKQS R WN T+D+F+R        TD C+Y  RDD+  A + V +YVDDL++A    + +   K  +S+ F M DL  L   LG+EV  D  +G +++    ++  VL ++G   C+ V TP +  +K++      G           YR  VG++ Y    TRPD A  V  +++   DPC   +   K + RYL + P  GI F G  +  +  G+ D  WA DIE R+S +GYVF LNGG I+W S+KQ+ V
Sbjct:    1 MESSDASKWKEACESEFESLCKNKTWELVP---LPRGRKAISSKWVFKVKETVEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFASIRIILSIAAQYKLVLHQMDVKTAFLNGLLEEEIYMKQPNGF--VDAKYPDHVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDDK--AMIFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDDTMQGVPYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVLRYLQATPTHGIRFAGSGDGELI-GYSDADWAGDIETRRSTSGYVFVLNGGCITWRSKKQRTV 398          
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: W8BWJ0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BWJ0_CERCA)

HSP 1 Score: 277 bits (708), Expect = 1.190e-79
Identity = 159/408 (38.97%), Postives = 237/408 (58.09%), Query Frame = 1
Query:   31 PKSTAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIPF-VRRLRKSLYGLKQSGRNWNNTLDD------FLRSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSGE-KIDEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS*GSYIREVLKRYGFDGCRGVPTPVEGKVKISAPEGR--SGNSTEYRGMVGSLTYASTETRPDTAYVVHQIARRMEDPCREDFSTCKHIFRYLSSVPDLGITFGGKSNSHVPEGFVDVGWAEDIEDRKSITGYVFKLNGGAISWCSRKQQLV 1224
            P++  EAL+G  A+ W+  M+ E+ AL+ N T    D   L AG K I +KW+F+ K  ++G + R+K+RLVA+G  Q  G +++ET +PV R  T+  +F +AAE    +  +DI  AYLN+ ++EE++++ P +F   S + P  V +L+K++YGLKQSGR WNNTLD+      F RS  ++CLY  +  +G +   +AVYVDDL+I    E +I   K  IS  F M D   LS  LG+E++ D   G +++   +YIR +LK YG   CR V TP++    +   +      N T+Y+ ++GSL Y +  +RPD  + V ++++R  +P  E  +  KHI RYLS   +L I +  +       GF D  WA D  DRKS +GY F L G A SW S KQ +V
Sbjct:  818 PQTVTEALQGEYAQNWQESMRSEYNALLSNDTWSLVD---LPAGAKTIGSKWVFRIKRDKNGEIERFKSRLVAKGCGQQFGVNYWETFSPVIRYETIRMLFAIAAEKQLFMHQIDISNAYLNSSLDEEVYMRQPQNF--ISTEHPNKVLKLKKAIYGLKQSGRAWNNTLDEVLQNMGFKRSKNEACLYVKQQQQGSS--YIAVYVDDLIIISPSENEICAIKRQISSKFEMHDSGSLSYFLGLEIQRDGKQGYVSLCQKTYIRNLLKTYGMQNCRAVATPLDPGFLVCCKDDSCVKVNVTQYQSLIGSLMYLAILSRPDILHAVSKLSQRNTNPHTEHENAAKHILRYLSGTINLSIVY--RKTGEPVVGFADADWANDQLDRKSYSGYTFFLAGSAFSWSSAKQSIV 1216          
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A445HPU2_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445HPU2_GLYSO)

HSP 1 Score: 276 bits (706), Expect = 1.370e-79
Identity = 155/406 (38.18%), Postives = 241/406 (59.36%), Query Frame = 1
Query:   31 PKSTAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIPFVRRLRKSLYGLKQSGRNWNNTLDD------FLRSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSGE-KIDEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS*GSYIREVLKRYGFDGCRGVPTPVEGKVKISAPEGRSGNSTEYRGMVGSLTYASTETRPDTAYVVHQIARRMEDPCREDFSTCKHIFRYLSSVPDLGITFGGKSNSHVPEGFVDVGWAEDIEDRKSITGYVFKLNGGAISWCSRKQQLVT 1227
            PK+ +EA+   +   W+  ++ E  ++++N T +  D   L  G K +  K IF+RK+K DG+V +YKARLV QGF Q EG DFF+T APVAR+ST+  +  LAA H+  +  MD+  A+LN  ++EE+++K P  F    G+   V +L KSLYGLKQ+ + W+   D+      F+ +  D CLY   D  G+  +++ +YVDD++I G+ + ++DE K  +S  F MKD+     +LGI+++  R N  I+IS   YI ++L+++ F  C  V TP++  +K+   +G + +  EY   +GSL YA   TRPD AY V +++R   +P    +     +F+YL    D G+T+ G  +  V EG+ D  W  ++ED  S +G+VF L GGAISW S+KQ  +T
Sbjct:  538 PKTFSEAMASRDVVFWKEAIQSEMDSIMQNNTWKLVD---LPPGCKPLGCKMIFRRKMKVDGTVDKYKARLVIQGFRQKEGIDFFDTYAPVARISTIRLLLALAAIHNLMIHQMDVKTAFLNGELDEEIYMKQPEGFV-MPGNENKVCKLMKSLYGLKQAPKQWHQKFDEVVLSSGFVINQADKCLYSKFDTHGKG-VIICLYVDDMLIFGTDQDQVDETKAFLSSKFDMKDMGEADVILGIKIK--RGNNGISISQSHYIEKILEKFNFKDCSPVSTPIDPNLKLLPNKGVAVSQLEYSRAIGSLMYAMISTRPDIAYAVAKLSRFTSNPSSHHWQAMNRVFKYLKGTIDYGLTYTGFPS--VIEGYSDASWITNMEDYSSTSGWVFLLGGGAISWASKKQTCIT 934          
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL)

HSP 1 Score: 262 bits (669), Expect = 4.310e-79
Identity = 156/400 (39.00%), Postives = 229/400 (57.25%), Query Frame = 1
Query:   52 LKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLR------STTDSCLYFSRDDRGEADLLVAVYVDDLVIA-GSGEKIDEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS*GSYIREVLKRYGFDGCRGVPTPVE-GKVKISAPEGRSGNSTEYRGMVGSLTYASTETRPDTAYVVHQIARRMEDPCREDFSTCKHIFRYLSSVPDLGITFG-GKSNSHVPEGFVDVGWAEDIEDRKSITGYVFKLNGGAISWCSRKQQLV 1224
            +KGPEAE W+A M  E  +L ENGT +  D   L  GRKA+  KWIFKRKL EDG+V RYKARLVAQGF+Q  G D+ E  APV R  T   +  +A++    ++  D+  AYLN  +EE +F++ P  +   + D   V  L+KSLYGLKQ+G  WN   D  L+      S  D CLY  R+ +G   L++  YVDD+VIA    E+ +E    +++HF++  L  +S  LGI++  +R     ++S  +YI+++L+++G +  +    P++ G ++    +    N+ +Y  ++GSL Y +  TRPD A  V  + R +  P + D++  K I RYL    D  +  G G+ N  V   +VD  WA D++ RKS +GY+F   GG I W SRKQ  V
Sbjct:    1 MKGPEAELWKAAMDDEMTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTFRVLLTVASQRGMVVKHADVKTAYLNGELEESIFMRQPPGYEDENRDA--VCSLQKSLYGLKQAGYVWNKKFDQVLKRMKFQQSKNDPCLYVRRNGKGYTYLVI--YVDDMVIACNDDEEYEEIIKTLNRHFKVTSLGDISHFLGIKI--NRNEKGFSLSQQTYIKQILEQFGMNQAKPSKYPLDPGHIQQKEEQVMLPNNHQYASLIGSLLYVAVNTRPDIAVSVSILGRSVSAPTQADWNEAKRILRYLKLTMDHELVLGQGERNLEV---YVDADWANDVKSRKSNSGYLFLFGGGPICWGSRKQTCV 388          
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A7D9JFU5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JFU5_PARCT)

HSP 1 Score: 262 bits (670), Expect = 5.230e-79
Identity = 154/426 (36.15%), Postives = 237/426 (55.63%), Query Frame = 1
Query:    1 NFTEAVS--KGKPKSTAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIP-FVRRLRKSLYGLKQSGRNWNNTLDDFL------RSTTDSCLYFS--RDDRGEADLLV-AVYVDDLV-IAGSGEKIDEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS*GSYIREVLKRYGFDGCRGVPTPVEGKVKISAPEGRSGNSTEYRGMVGSLTYASTETRPDTAYVVHQIARRMEDPCREDFSTCKHIFRYLSSVPDLGITF----GGKSNSHVPEGFVDVGWAEDIEDRKSITGYVFKLNGGAISWCSRKQQLVT 1227
            N TE+++    +P+S +EAL G  A KW+  +K E+ +L+ N T E         G   I +KW+ K K   DG+V R+KARLVAQG+SQ  G ++ E  +PVAR S++ T+  LA +H+ E+  MD+  A+LN  +E ++++  P  F     + P +V +L+KSLYGLKQS R WN TLD FL      +S  D+C+Y    ++D G    ++ AVYVDD++ I+     ++  K  + +HF M D   +  +LG+ ++ DR   T+ IS   Y+  VL R+G   C+ + TP+E        E    +   Y+  +G LTY ST TRPD +  V  ++  M +P +E ++  K + RY+    + G+ F        N     G+ D  WA D++ R+S +GYVFK+    +SWCS+KQ  VT
Sbjct:    2 NITESLTAENEEPQSISEALNGANASKWKQALKEEYNSLISNETWELVPP---PEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGINYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGF--VDQEHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSIKNDNGFISFVILAVYVDDIIPISNDINMLNTEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQQRYLESVLDRFGMANCKPISTPLETTYHKRTEEEEGFDKNLYQQAIGRLTYISTATRPDISAAVSILSSYMSNPSKEHWNGVKRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVT 422          
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A6S7HLY2_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HLY2_PARCT)

HSP 1 Score: 264 bits (675), Expect = 6.820e-79
Identity = 154/411 (37.47%), Postives = 236/411 (57.42%), Query Frame = 1
Query:   25 GKPKSTAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGS-VARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGD-IPFVRRLRKSLYGLKQSGRNWNNTLDD------FLRSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSG-EKIDEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS*GSYIREVLKRYGFDGCRGVPTPVEGKVKISAPEGRSGNSTEYRGMVGSLTYASTETRPDTAYVVHQIARRMEDPCREDFSTCKHIFRYLSSVPDLGITFGGKSNSHVPEGFVDVGWAEDIEDRKSITGYVFKL--NGGAISWCSRKQQLV 1224
            G P++  EA++ PEA  W   MKGE  AL EN T E      L  G+  +   W++   +KED + +   KAR VA+G++QV G D+ ET +P A ++++  + +LAA+++  +  MD+  A+L+ P++ E+F++ P+ F   S + +  V RL+KSLYGLKQSGRNWN  LD+      F+R+  D C+Y  +   GE  ++V ++VDDL+IA S  +KI +FK N+   FRMKDL  +S  LGI  +  + NG I ++   YI+++L R+G   C+   TP E + +    +    +   YR +VGSL Y  T TRPD ++VV ++++++  P  ED  T KH+ RYL    +  + F           + D  WA  ++DR S TGY F L  NG  I W S+KQ  +
Sbjct:  168 GVPQTYTEAMESPEASGWEKAMKGEMEALKENDTFELTS---LPEGKNLVGGSWVYT--IKEDANGLETLKARYVAKGYNQVHGIDYEETFSPTANITSIRILMQLAAQYNLTVHQMDVKTAFLHVPIDHEIFMEQPMGFEELSENGVKLVYRLKKSLYGLKQSGRNWNRVLDEYLISDGFIRNPVDHCVYQKQ--TGEDIIIVVIWVDDLIIASSNTDKISQFKENMKSKFRMKDLGEISYFLGISFK--QGNGVIKMNQKRYIQKILDRFGMSDCKPRTTPCEQRFE-GMSDSEQVDPRRYREIVGSLIYLMTCTRPDISWVVSKLSQKLSCPRLEDLVTAKHVLRYLKGSMEHELCFRKCDGELNLIAYTDADWASSLDDRHSTTGYCFSLTENGPPILWKSKKQPTI 568          
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: Q45W64_PHACR (Polyprotein n=1 Tax=Phanerochaete chrysosporium (strain RP-78 / ATCC MYA-4764 / FGSC 9002) TaxID=273507 RepID=Q45W64_PHACR)

HSP 1 Score: 275 bits (702), Expect = 8.130e-79
Identity = 156/412 (37.86%), Postives = 239/412 (58.01%), Query Frame = 1
Query:   13 AVSKGKPKSTAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIPFVRRLRKSLYGLKQSGRNWNNTLDDFL-------RSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSGEKIDEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS*GSYIREVLKRYGFDGCRGVPTPVEGKVKIS-APEGRSGNSTEYRGMVGSLTYASTETRPDTAYVVHQIARRMEDPCREDFSTCKHIFRYLSSVPDLGITFGGKSNSHVPEGFVDVGWAEDIEDRKSITGYVFKLNGGAISWCSRKQQLV 1224
            A+    P+S  E     +  +W+A M  E   L  NGT +    G L  GRKAI +KW+F  K  +DGS+ +YKARLVAQGFSQ+ G+D+F+T +PV R  T      LAA  + + + +DI  AYL+ P+EEE++++    +   SG + +V  L K+LYGLKQ+GR WN+ L+  L       RS  D CLYF  +  G+ ++ + V+VDD  + G    +D FK ++++HF +     LS  +G++V   R NG I+I    Y+  +L+R+G   C+ V TP++  VK+   PE ++     Y   +GSL YA+T TRPD A+ V  +++    P    ++  KH+FRYL    D+G+TF  +++  +  G+ D  WA+   DR+S++GY + L GG +SW S+KQ  V
Sbjct:  826 AMDSDHPRSVDECKTRDDWPQWKAAMDAEMAQLEANGTWKK---GELPPGRKAIGSKWVFAIKRHQDGSIDKYKARLVAQGFSQIAGQDYFDTFSPVVRQETFRVATALAATENLDSDALDIVGAYLHGPLEEEIYMRQAPGYDDGSGQV-YV--LIKALYGLKQAGRVWNHLLNHVLTSLMGWTRSEADPCLYFKHE--GKLNMAL-VHVDDTALYGERSILDRFKADVAKHFAITTNGTLSSFVGLQVT--RKNGAISILQTRYLETILERFGMQDCKPVSTPLDPGVKLEPTPEDQTPADVPYAAAIGSLMYAATGTRPDIAFAVQTLSQFTSRPSATHWTAVKHVFRYLKGTTDVGLTFARRADDDIT-GYSDADWAQ-AHDRRSVSGYAYLLAGGIVSWNSKKQPTV 1224          
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A0C9RAA9_9HYME (POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9RAA9_9HYME)

HSP 1 Score: 265 bits (678), Expect = 3.620e-78
Identity = 154/412 (37.38%), Postives = 232/412 (56.31%), Query Frame = 1
Query:   31 PKSTAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIPFVRRLRKSLYGLKQSGRNWNNTLDDFL------RSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSGEKIDE-FKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS*GSYIREVLKRYGFDGCRGVPTPVEGKVKI-------SAPEGRSGNSTEYRGMVGSLTYASTETRPDTAYVVHQIARRMEDPCREDFSTCKHIFRYLSSVPDLGITFGGKSNSHVPEGFVDVGWAEDIEDRKSITGYVFKLNGGAISWCSRKQQLV 1224
            P +  EAL  PEA+ W+  MK E   +  + T  +    +L  G++AI TKW+FK K   +G++ RYKARLV +G SQ +G D+ ET +PV R ++L  +F +AA+HD  +  +D   A+LN  ++EE+F+K P  +S  SG    V RL KSLYGLKQ+ + WN+ L++ L      RS  D C+YF   +     + VA+YVDD+++  + +K  +  K+ +S   +MKD+   S VLG+ V+ D     I +    YI  VLKR+G D C  V TP++   K+       S  E +      Y   VGSL YA+  TRPD ++ V+ ++R  ++P +  +   K + RYL    + GI F   + S    G+ D  WA D++ R+S +GYVF + G AISW S +Q+ V
Sbjct:  233 PVNLEEALNSPEADDWKRAMKEE---IESHKTNRTWVLTKLPEGKRAINTKWVFKTKRNAEGALVRYKARLVVKGCSQKQGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQPEGYSDNSGR---VCRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSEYSM--VYVAIYVDDVLVFSNDKKATQRIKNELSSKIKMKDMGSASSVLGMRVQRDEVKKLIKLDQSEYISSVLKRFGMDDCNAVATPLDLSQKLTLDMCPKSEEEKKEMEKVPYMEAVGSLLYAAQNTRPDISFAVNLLSRFSQNPGKGHWLALKRVMRYLKGTVNKGIVFRKSAQSLT--GYCDADWAGDLDQRRSTSGYVFIMQGAAISWSSHRQRTV 634          
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A182GCJ5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GCJ5_AEDAL)

HSP 1 Score: 265 bits (676), Expect = 5.430e-78
Identity = 152/416 (36.54%), Postives = 233/416 (56.01%), Query Frame = 1
Query:    1 NFTEAVSKGKPKSTAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIPFVRRLRKSLYGLKQSGRNWNNTLDDFL------RSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSGEKIDE-FKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS*GSYIREVLKRYGFDGCRGVPTPVEGKVKISAPEGRSGNSTEYRGMVGSLTYASTETRPDTAYVVHQIARRMEDPCREDFSTCKHIFRYLSSVPDLGITFGGKSNSHVPEGFVDVGWAEDIEDRKSITGYVFKLNGGAISWCSRKQQLVT 1227
            NF E +    P S AE  K  + +KW+A M  E  ++  N T       +L  GRKAI +KW+FK K        R+KARLVA+GF+Q +G D+ +T +PVA++ TL TV  LA E+   +  MD+  A+LN  + EE+++  P +F   +G    V RL +S+YGLKQ+ R WN+    F+      RS+ D CLY      G+  +++ +YVDD+++A S  +I E  K  ++  F M D   + + LG+ +  DR  G + IS   Y   +L+R+G   C+ + TP+E ++K+   + +   S  YR +VG LTYAS  TRPD A  V+  ++    P  E ++  K I RY+    D+G+ +  + N  + + F D  WA D+ DR+S++GYV KL G  + W +RKQQ V+
Sbjct:  214 NFVEDI----PNSIAELKKRDDWQKWKAAMDEEMSSMARNNT---WTLVKLPPGRKAITSKWVFKVKRGGAEKEDRFKARLVARGFTQKQGFDYTDTYSPVAKLDTLRTVLALANENRMFVHTMDVKTAFLNGELAEEIYMTQPEEFQQGNG---LVCRLHRSIYGLKQASRAWNDRFHSFISKLGFVRSSNDFCLYTRG--AGKEMMILVIYVDDILLASSSLQILEAVKRKLAAEFEMTDEGEIKQFLGMRIDRDRNTGVLKISQRDYFDGLLRRFGMMDCKPISTPMENRLKLQKGDEKQRTSKPYRELVGCLTYASITTRPDLAAAVNFFSQFQSCPNEEHWNHLKRILRYIKGTLDVGLVYKVEENEPLLQVFCDADWANDLTDRRSVSGYVVKLYGSTVGWITRKQQTVS 617          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9KES8_PARCT1.620e-8141.14Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A5D6YB57_9STRA4.720e-8137.93Reverse transcriptase Ty1/copia-type domain-contai... [more]
W8BWJ0_CERCA1.190e-7938.97Retrovirus-related Pol polyprotein from transposon... [more]
A0A445HPU2_GLYSO1.370e-7938.18Retrovirus-related Pol polyprotein from transposon... [more]
A0A182GIT5_AEDAL4.310e-7939.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9JFU5_PARCT5.230e-7936.15Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6S7HLY2_PARCT6.820e-7937.47Reverse transcriptase Ty1/copia-type domain-contai... [more]
Q45W64_PHACR8.130e-7937.86Polyprotein n=1 Tax=Phanerochaete chrysosporium (s... [more]
A0A0C9RAA9_9HYME3.620e-7837.38POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus ... [more]
A0A182GCJ5_AEDAL5.430e-7836.54Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig45553contigH-paniculata_contig45553:232..1557 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score166.0
Seed ortholog evalue2.1e-38
Seed eggNOG ortholog15368.BRADI3G49960.1
KEGG koko:K20093
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Mitochondrial protein
EggNOG OGs37THH@33090,3GG2K@35493,COG2801@1,KOG0017@2759
EC3.6.4.12
COG Functional cat.O
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Exons3
Model size1227
Cds size693
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig45553.11428.1prot_H-paniculata_contig45553.11428.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig45553 760..1470 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930364.704979-UTR-H-paniculata_contig45553:231..5801622930364.704979-UTR-H-paniculata_contig45553:231..580Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig45553 232..580 -
1691481259.0152154-UTR-H-paniculata_contig45553:231..5801691481259.0152154-UTR-H-paniculata_contig45553:231..580Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig45553 232..580 -
1622930364.7213147-UTR-H-paniculata_contig45553:661..7591622930364.7213147-UTR-H-paniculata_contig45553:661..759Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig45553 662..759 -
1691481259.0248985-UTR-H-paniculata_contig45553:661..7591691481259.0248985-UTR-H-paniculata_contig45553:661..759Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig45553 662..759 -
1622930364.7672083-UTR-H-paniculata_contig45553:1470..15571622930364.7672083-UTR-H-paniculata_contig45553:1470..1557Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig45553 1471..1557 -
1691481259.0479896-UTR-H-paniculata_contig45553:1470..15571691481259.0479896-UTR-H-paniculata_contig45553:1470..1557Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig45553 1471..1557 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930364.7330384-CDS-H-paniculata_contig45553:759..9931622930364.7330384-CDS-H-paniculata_contig45553:759..993Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig45553 760..993 -
1691481259.032525-CDS-H-paniculata_contig45553:759..9931691481259.032525-CDS-H-paniculata_contig45553:759..993Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig45553 760..993 -
1622930364.7451808-CDS-H-paniculata_contig45553:1011..14701622930364.7451808-CDS-H-paniculata_contig45553:1011..1470Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig45553 1012..1470 -
1691481259.0404398-CDS-H-paniculata_contig45553:1011..14701691481259.0404398-CDS-H-paniculata_contig45553:1011..1470Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig45553 1012..1470 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig45553.11428.1

>prot_H-paniculata_contig45553.11428.1 ID=prot_H-paniculata_contig45553.11428.1|Name=mRNA_H-paniculata_contig45553.11428.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=231bp
MKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKA
RLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAA
YLNAPVEEELFVKLPLDFSPFSGDIPFVRRLRKSLYGLKQSGRNWNNTLD
DFLRSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSGEKIDEFKHNISQ
HFRMKDLDFLSRVLGIEVRCDRPNGTIAIS*
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mRNA from alignment at H-paniculata_contig45553:232..1557-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig45553.11428.1 ID=mRNA_H-paniculata_contig45553.11428.1|Name=mRNA_H-paniculata_contig45553.11428.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1326bp|location=Sequence derived from alignment at H-paniculata_contig45553:232..1557- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AACTTTACAGAGGCGGTATCTAAGGGGAAGCCGAAATCCACGGCAGAAGC ATTAAAGGGTCCAGAGGCGGAAAAATGGCGCGCGGAAATGAAGGGAGAAT GGGGGGCGTTGGTGGAAAATGGAACACGGGAAAGCGAAGACACAGGGAGG TTATCGGCAGGGCGGAAGGCGATTCGTACGAAATGGATTTTCAAACGGAA ACTGAAGGAGGACGGCAGCGTGGCACGCTACAAAGCGCGACTGGTGGCTC AAGGCTTTTCCCAAGTGGAGGGTGAAGATTTCTTTGAAACCAGCGCTCCC GTAGCTCGTATGTCGACGTTACATACTGTTTTTAGGCTGGCCGCCGAACA TGATTTCGAATTAGAAGGTATGGACATAGATGCGGCGTATTTGAACGCCC CGGTAGAAGAAGAGCTGTTTGTTAAGCTACCCCTCGATTTTTCCCCTTTC TCCGGAGACATACCGTTTGTGCGTCGCCTGCGCAAAAGCCTGTATGGCCT CAAGCAGAGCGGCCGTAACTGGAATAACACTCTCGATGATTTTCTTGTTG GGATATGACTCGAGCGTTCCACTACCGACTCATGCTTGTACTTTTCTCGC GACGATAGGGGAGAGGCAGACCTTCTGGTGGCCGTGTATGTTGACGACCT GGTCATTGCTGGCAGTGGTGAGAAAATAGACGAGTTCAAGCATAACATAA GTCAGCATTTTAGAATGAAAGACTTGGACTTTCTCTCACGCGTGTTGGGA ATAGAAGTACGATGTGACCGCCCTAATGGTACCATAGCTATCTCGTAGGG TAGCTACATTCGCGAGGTACTAAAAAGATACGGTTTTGACGGATGTCGAG GGGTACCCACCCCTGTAGAGGGAAAAGTGAAGATTTCGGCACCCGAGTCG GCCGACAAGCCCTCTGAACCGAAGTCACTTGGGGCTGTACCGTCGGACAT AGGCGCAGGAGTACAAGAAAGCAGCAGAGGGAGAAGTGGCAATTCAACTG AATACAGAGGCATGGTAGGATCCCTCACGTATGCCTCGACAGAAACTAGA CCTGATACAGCATACGTGGTACACCAAATAGCACGTCGTATGGAGGACCC ATGTCGGGAAGACTTCAGTACATGCAAGCACATTTTTCGTTATCTCAGTA GTGTGCCTGACCTCGGCATTACGTTCGGGGGTAAAAGTAATAGTCATGTT CCGGAAGGATTCGTTGATGTCGGTTGGGCGGAAGATATCGAGGACCGAAA GTCCATAACAGGATACGTTTTCAAACTGAACGGTGGTGCGATAAGTTGGT GCTCTAGGAAGCAACAGTTAGTCACG
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Coding sequence (CDS) from alignment at H-paniculata_contig45553:232..1557-

>mRNA_H-paniculata_contig45553.11428.1 ID=mRNA_H-paniculata_contig45553.11428.1|Name=mRNA_H-paniculata_contig45553.11428.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1386bp|location=Sequence derived from alignment at H-paniculata_contig45553:232..1557- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGGGAGAATGGGGGGCGTTGGTGGAAAATGGAACACGGGAAAGCGA
AGACACAGGGAGGTTATCGGCAGGGCGGAAGGCGATTCGTACGAAATGGA
TTTTCAAACGGAAACTGAAGGAGGACGGCAGCGTGGCACGCTACAAAGCG
CGACTGGTGGCTCAAGGCTTTTCCCAAGTGGAGGGTGAAGATTTCTTTGA
AACCAGCGCTCCCGTAGCTCGTATGTCGACGTTACATACTGTTTTTAGGC
TGGCCGCCGAACATGATTTCGAATTAGAAGGTATGGACATAGATGCGGCG
TATTTGAACGCCCCGGTAGAAGAAGAGCTGTTTGTTAAGCTACCCCTCGA
TTTTTCCCCTTTCTCCGGAGACATACCGTTTGTGCGTCGCCTGCGCAAAA
GCCTGTATGGCCTCAAGCAGAGCGGCCGTAACTGGAATAACACTCTCGAT
GATTTTCTTATGAAGGGAGAATGGGGGGCGTTGGTGGAAAATGGAACACG
GGAAAGCGAAGACACAGGGAGGTTATCGGCAGGGCGGAAGGCGATTCGTA
CGAAATGGATTTTCAAACGGAAACTGAAGGAGGACGGCAGCGTGGCACGC
TACAAAGCGCGACTGGTGGCTCAAGGCTTTTCCCAAGTGGAGGGTGAAGA
TTTCTTTGAAACCAGCGCTCCCGTAGCTCGTATGTCGACGTTACATACTG
TTTTTAGGCTGGCCGCCGAACATGATTTCGAATTAGAAGGTATGGACATA
GATGCGGCGTATTTGAACGCCCCGGTAGAAGAAGAGCTGTTTGTTAAGCT
ACCCCTCGATTTTTCCCCTTTCTCCGGAGACATACCGTTTGTGCGTCGCC
TGCGCAAAAGCCTGTATGGCCTCAAGCAGAGCGGCCGTAACTGGAATAAC
ACTCTCGATGATTTTCTTCGTTCCACTACCGACTCATGCTTGTACTTTTC
TCGCGACGATAGGGGAGAGGCAGACCTTCTGGTGGCCGTGTATGTTGACG
ACCTGGTCATTGCTGGCAGTGGTGAGAAAATAGACGAGTTCAAGCATAAC
ATAAGTCAGCATTTTAGAATGAAAGACTTGGACTTTCTCTCACGCGTGTT
GGGAATAGAAGTACGATGTGACCGCCCTAATGGTACCATAGCTATCTCGT
AGCGTTCCACTACCGACTCATGCTTGTACTTTTCTCGCGACGATAGGGGA
GAGGCAGACCTTCTGGTGGCCGTGTATGTTGACGACCTGGTCATTGCTGG
CAGTGGTGAGAAAATAGACGAGTTCAAGCATAACATAAGTCAGCATTTTA
GAATGAAAGACTTGGACTTTCTCTCACGCGTGTTGGGAATAGAAGTACGA
TGTGACCGCCCTAATGGTACCATAGCTATCTCGTAG
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