mRNA_H-paniculata_contig45553.11428.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT) HSP 1 Score: 273 bits (698), Expect = 1.620e-81 Identity = 151/367 (41.14%), Postives = 224/367 (61.04%), Query Frame = 1
Query: 151 LSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIPFVRRLRKSLYGLKQSGRNWNNTLD------DFLRSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSGE-KIDEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS*GSYIREVLKRYGFDGCRGVPTPVEG--KVKISAPEGRSGNSTEYRGMVGSLTYASTETRPDTAYVVHQIARRMEDPCREDFSTCKHIFRYLSSVPDLGITFGGKSNSHVPEGFVDVGWAEDIEDRKSITGYVFKLNGGAISWCSRKQQLV 1224
L RKA+ +KW+F+ K DG+V +KARLVAQGFSQ G+D+ ET +PVAR ++ TV LAA+H +L MD+ A+LN ++EE+++K F G V RLR+S+YGLKQS R WN+ LD F+++T D C+Y +++ GE ++AVYVDD+++AG + KI+E K +++ F+MKD+ L LG++V + I I +Y + VL+R+G + + TPV K+K +A + + + Y+ VG L Y ST+TRPD AY V +AR DP E + K I RYL+ D+G+ + G + G+ D WA D++DRKS +GYVF+++ AISW S+KQ V
Sbjct: 19 LPENRKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQTEGFIE-KGKEHLVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCV 382
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA) HSP 1 Score: 265 bits (676), Expect = 4.720e-81 Identity = 154/406 (37.93%), Postives = 228/406 (56.16%), Query Frame = 1
Query: 52 LKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIP-FVRRLRKSLYGLKQSGRNWNNTLDDFLRST------TDSCLYFSRDDRGEADLLVAVYVDDLVIA-GSGEKIDEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS*GSYIREVLKRYGFDGCRGVPTPVEGKVKISAPEGRSG-------NSTEYRGMVGSLTYASTETRPDTAYVVHQIARRMEDPCREDFSTCKHIFRYLSSVPDLGITFGGKSNSHVPEGFVDVGWAEDIEDRKSITGYVFKLNGGAISWCSRKQQLV 1224
++ +A KW+ + E+ +L +N T E L GRKAI +KW+FK K +G + RYKARLVA+GF Q G DF ET APVA+ +++ + +AA++ L MD+ A+LN +EEE+++K P F P V +L+++LYGLKQS R WN T+D+F+R TD C+Y RDD+ A + V +YVDDL++A + + K +S+ F M DL L LG+EV D +G +++ ++ VL ++G C+ V TP + +K++ G YR VG++ Y TRPD A V +++ DPC + K + RYL + P GI F G + + G+ D WA DIE R+S +GYVF LNGG I+W S+KQ+ V
Sbjct: 1 MESSDASKWKEACESEFESLCKNKTWELVP---LPRGRKAISSKWVFKVKETVEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFASIRIILSIAAQYKLVLHQMDVKTAFLNGLLEEEIYMKQPNGF--VDAKYPDHVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDDK--AMIFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDDTMQGVPYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVLRYLQATPTHGIRFAGSGDGELI-GYSDADWAGDIETRRSTSGYVFVLNGGCITWRSKKQRTV 398
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: W8BWJ0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BWJ0_CERCA) HSP 1 Score: 277 bits (708), Expect = 1.190e-79 Identity = 159/408 (38.97%), Postives = 237/408 (58.09%), Query Frame = 1
Query: 31 PKSTAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIPF-VRRLRKSLYGLKQSGRNWNNTLDD------FLRSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSGE-KIDEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS*GSYIREVLKRYGFDGCRGVPTPVEGKVKISAPEGR--SGNSTEYRGMVGSLTYASTETRPDTAYVVHQIARRMEDPCREDFSTCKHIFRYLSSVPDLGITFGGKSNSHVPEGFVDVGWAEDIEDRKSITGYVFKLNGGAISWCSRKQQLV 1224
P++ EAL+G A+ W+ M+ E+ AL+ N T D L AG K I +KW+F+ K ++G + R+K+RLVA+G Q G +++ET +PV R T+ +F +AAE + +DI AYLN+ ++EE++++ P +F S + P V +L+K++YGLKQSGR WNNTLD+ F RS ++CLY + +G + +AVYVDDL+I E +I K IS F M D LS LG+E++ D G +++ +YIR +LK YG CR V TP++ + + N T+Y+ ++GSL Y + +RPD + V ++++R +P E + KHI RYLS +L I + + GF D WA D DRKS +GY F L G A SW S KQ +V
Sbjct: 818 PQTVTEALQGEYAQNWQESMRSEYNALLSNDTWSLVD---LPAGAKTIGSKWVFRIKRDKNGEIERFKSRLVAKGCGQQFGVNYWETFSPVIRYETIRMLFAIAAEKQLFMHQIDISNAYLNSSLDEEVYMRQPQNF--ISTEHPNKVLKLKKAIYGLKQSGRAWNNTLDEVLQNMGFKRSKNEACLYVKQQQQGSS--YIAVYVDDLIIISPSENEICAIKRQISSKFEMHDSGSLSYFLGLEIQRDGKQGYVSLCQKTYIRNLLKTYGMQNCRAVATPLDPGFLVCCKDDSCVKVNVTQYQSLIGSLMYLAILSRPDILHAVSKLSQRNTNPHTEHENAAKHILRYLSGTINLSIVY--RKTGEPVVGFADADWANDQLDRKSYSGYTFFLAGSAFSWSSAKQSIV 1216
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A445HPU2_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445HPU2_GLYSO) HSP 1 Score: 276 bits (706), Expect = 1.370e-79 Identity = 155/406 (38.18%), Postives = 241/406 (59.36%), Query Frame = 1
Query: 31 PKSTAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIPFVRRLRKSLYGLKQSGRNWNNTLDD------FLRSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSGE-KIDEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS*GSYIREVLKRYGFDGCRGVPTPVEGKVKISAPEGRSGNSTEYRGMVGSLTYASTETRPDTAYVVHQIARRMEDPCREDFSTCKHIFRYLSSVPDLGITFGGKSNSHVPEGFVDVGWAEDIEDRKSITGYVFKLNGGAISWCSRKQQLVT 1227
PK+ +EA+ + W+ ++ E ++++N T + D L G K + K IF+RK+K DG+V +YKARLV QGF Q EG DFF+T APVAR+ST+ + LAA H+ + MD+ A+LN ++EE+++K P F G+ V +L KSLYGLKQ+ + W+ D+ F+ + D CLY D G+ +++ +YVDD++I G+ + ++DE K +S F MKD+ +LGI+++ R N I+IS YI ++L+++ F C V TP++ +K+ +G + + EY +GSL YA TRPD AY V +++R +P + +F+YL D G+T+ G + V EG+ D W ++ED S +G+VF L GGAISW S+KQ +T
Sbjct: 538 PKTFSEAMASRDVVFWKEAIQSEMDSIMQNNTWKLVD---LPPGCKPLGCKMIFRRKMKVDGTVDKYKARLVIQGFRQKEGIDFFDTYAPVARISTIRLLLALAAIHNLMIHQMDVKTAFLNGELDEEIYMKQPEGFV-MPGNENKVCKLMKSLYGLKQAPKQWHQKFDEVVLSSGFVINQADKCLYSKFDTHGKG-VIICLYVDDMLIFGTDQDQVDETKAFLSSKFDMKDMGEADVILGIKIK--RGNNGISISQSHYIEKILEKFNFKDCSPVSTPIDPNLKLLPNKGVAVSQLEYSRAIGSLMYAMISTRPDIAYAVAKLSRFTSNPSSHHWQAMNRVFKYLKGTIDYGLTYTGFPS--VIEGYSDASWITNMEDYSSTSGWVFLLGGGAISWASKKQTCIT 934
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL) HSP 1 Score: 262 bits (669), Expect = 4.310e-79 Identity = 156/400 (39.00%), Postives = 229/400 (57.25%), Query Frame = 1
Query: 52 LKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLR------STTDSCLYFSRDDRGEADLLVAVYVDDLVIA-GSGEKIDEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS*GSYIREVLKRYGFDGCRGVPTPVE-GKVKISAPEGRSGNSTEYRGMVGSLTYASTETRPDTAYVVHQIARRMEDPCREDFSTCKHIFRYLSSVPDLGITFG-GKSNSHVPEGFVDVGWAEDIEDRKSITGYVFKLNGGAISWCSRKQQLV 1224
+KGPEAE W+A M E +L ENGT + D L GRKA+ KWIFKRKL EDG+V RYKARLVAQGF+Q G D+ E APV R T + +A++ ++ D+ AYLN +EE +F++ P + + D V L+KSLYGLKQ+G WN D L+ S D CLY R+ +G L++ YVDD+VIA E+ +E +++HF++ L +S LGI++ +R ++S +YI+++L+++G + + P++ G ++ + N+ +Y ++GSL Y + TRPD A V + R + P + D++ K I RYL D + G G+ N V +VD WA D++ RKS +GY+F GG I W SRKQ V
Sbjct: 1 MKGPEAELWKAAMDDEMTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTFRVLLTVASQRGMVVKHADVKTAYLNGELEESIFMRQPPGYEDENRDA--VCSLQKSLYGLKQAGYVWNKKFDQVLKRMKFQQSKNDPCLYVRRNGKGYTYLVI--YVDDMVIACNDDEEYEEIIKTLNRHFKVTSLGDISHFLGIKI--NRNEKGFSLSQQTYIKQILEQFGMNQAKPSKYPLDPGHIQQKEEQVMLPNNHQYASLIGSLLYVAVNTRPDIAVSVSILGRSVSAPTQADWNEAKRILRYLKLTMDHELVLGQGERNLEV---YVDADWANDVKSRKSNSGYLFLFGGGPICWGSRKQTCV 388
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A7D9JFU5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JFU5_PARCT) HSP 1 Score: 262 bits (670), Expect = 5.230e-79 Identity = 154/426 (36.15%), Postives = 237/426 (55.63%), Query Frame = 1
Query: 1 NFTEAVS--KGKPKSTAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIP-FVRRLRKSLYGLKQSGRNWNNTLDDFL------RSTTDSCLYFS--RDDRGEADLLV-AVYVDDLV-IAGSGEKIDEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS*GSYIREVLKRYGFDGCRGVPTPVEGKVKISAPEGRSGNSTEYRGMVGSLTYASTETRPDTAYVVHQIARRMEDPCREDFSTCKHIFRYLSSVPDLGITF----GGKSNSHVPEGFVDVGWAEDIEDRKSITGYVFKLNGGAISWCSRKQQLVT 1227
N TE+++ +P+S +EAL G A KW+ +K E+ +L+ N T E G I +KW+ K K DG+V R+KARLVAQG+SQ G ++ E +PVAR S++ T+ LA +H+ E+ MD+ A+LN +E ++++ P F + P +V +L+KSLYGLKQS R WN TLD FL +S D+C+Y ++D G ++ AVYVDD++ I+ ++ K + +HF M D + +LG+ ++ DR T+ IS Y+ VL R+G C+ + TP+E E + Y+ +G LTY ST TRPD + V ++ M +P +E ++ K + RY+ + G+ F N G+ D WA D++ R+S +GYVFK+ +SWCS+KQ VT
Sbjct: 2 NITESLTAENEEPQSISEALNGANASKWKQALKEEYNSLISNETWELVPP---PEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGINYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGF--VDQEHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSIKNDNGFISFVILAVYVDDIIPISNDINMLNTEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQQRYLESVLDRFGMANCKPISTPLETTYHKRTEEEEGFDKNLYQQAIGRLTYISTATRPDISAAVSILSSYMSNPSKEHWNGVKRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVT 422
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A6S7HLY2_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HLY2_PARCT) HSP 1 Score: 264 bits (675), Expect = 6.820e-79 Identity = 154/411 (37.47%), Postives = 236/411 (57.42%), Query Frame = 1
Query: 25 GKPKSTAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGS-VARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGD-IPFVRRLRKSLYGLKQSGRNWNNTLDD------FLRSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSG-EKIDEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS*GSYIREVLKRYGFDGCRGVPTPVEGKVKISAPEGRSGNSTEYRGMVGSLTYASTETRPDTAYVVHQIARRMEDPCREDFSTCKHIFRYLSSVPDLGITFGGKSNSHVPEGFVDVGWAEDIEDRKSITGYVFKL--NGGAISWCSRKQQLV 1224
G P++ EA++ PEA W MKGE AL EN T E L G+ + W++ +KED + + KAR VA+G++QV G D+ ET +P A ++++ + +LAA+++ + MD+ A+L+ P++ E+F++ P+ F S + + V RL+KSLYGLKQSGRNWN LD+ F+R+ D C+Y + GE ++V ++VDDL+IA S +KI +FK N+ FRMKDL +S LGI + + NG I ++ YI+++L R+G C+ TP E + + + + YR +VGSL Y T TRPD ++VV ++++++ P ED T KH+ RYL + + F + D WA ++DR S TGY F L NG I W S+KQ +
Sbjct: 168 GVPQTYTEAMESPEASGWEKAMKGEMEALKENDTFELTS---LPEGKNLVGGSWVYT--IKEDANGLETLKARYVAKGYNQVHGIDYEETFSPTANITSIRILMQLAAQYNLTVHQMDVKTAFLHVPIDHEIFMEQPMGFEELSENGVKLVYRLKKSLYGLKQSGRNWNRVLDEYLISDGFIRNPVDHCVYQKQ--TGEDIIIVVIWVDDLIIASSNTDKISQFKENMKSKFRMKDLGEISYFLGISFK--QGNGVIKMNQKRYIQKILDRFGMSDCKPRTTPCEQRFE-GMSDSEQVDPRRYREIVGSLIYLMTCTRPDISWVVSKLSQKLSCPRLEDLVTAKHVLRYLKGSMEHELCFRKCDGELNLIAYTDADWASSLDDRHSTTGYCFSLTENGPPILWKSKKQPTI 568
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: Q45W64_PHACR (Polyprotein n=1 Tax=Phanerochaete chrysosporium (strain RP-78 / ATCC MYA-4764 / FGSC 9002) TaxID=273507 RepID=Q45W64_PHACR) HSP 1 Score: 275 bits (702), Expect = 8.130e-79 Identity = 156/412 (37.86%), Postives = 239/412 (58.01%), Query Frame = 1
Query: 13 AVSKGKPKSTAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIPFVRRLRKSLYGLKQSGRNWNNTLDDFL-------RSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSGEKIDEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS*GSYIREVLKRYGFDGCRGVPTPVEGKVKIS-APEGRSGNSTEYRGMVGSLTYASTETRPDTAYVVHQIARRMEDPCREDFSTCKHIFRYLSSVPDLGITFGGKSNSHVPEGFVDVGWAEDIEDRKSITGYVFKLNGGAISWCSRKQQLV 1224
A+ P+S E + +W+A M E L NGT + G L GRKAI +KW+F K +DGS+ +YKARLVAQGFSQ+ G+D+F+T +PV R T LAA + + + +DI AYL+ P+EEE++++ + SG + +V L K+LYGLKQ+GR WN+ L+ L RS D CLYF + G+ ++ + V+VDD + G +D FK ++++HF + LS +G++V R NG I+I Y+ +L+R+G C+ V TP++ VK+ PE ++ Y +GSL YA+T TRPD A+ V +++ P ++ KH+FRYL D+G+TF +++ + G+ D WA+ DR+S++GY + L GG +SW S+KQ V
Sbjct: 826 AMDSDHPRSVDECKTRDDWPQWKAAMDAEMAQLEANGTWKK---GELPPGRKAIGSKWVFAIKRHQDGSIDKYKARLVAQGFSQIAGQDYFDTFSPVVRQETFRVATALAATENLDSDALDIVGAYLHGPLEEEIYMRQAPGYDDGSGQV-YV--LIKALYGLKQAGRVWNHLLNHVLTSLMGWTRSEADPCLYFKHE--GKLNMAL-VHVDDTALYGERSILDRFKADVAKHFAITTNGTLSSFVGLQVT--RKNGAISILQTRYLETILERFGMQDCKPVSTPLDPGVKLEPTPEDQTPADVPYAAAIGSLMYAATGTRPDIAFAVQTLSQFTSRPSATHWTAVKHVFRYLKGTTDVGLTFARRADDDIT-GYSDADWAQ-AHDRRSVSGYAYLLAGGIVSWNSKKQPTV 1224
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A0C9RAA9_9HYME (POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9RAA9_9HYME) HSP 1 Score: 265 bits (678), Expect = 3.620e-78 Identity = 154/412 (37.38%), Postives = 232/412 (56.31%), Query Frame = 1
Query: 31 PKSTAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIPFVRRLRKSLYGLKQSGRNWNNTLDDFL------RSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSGEKIDE-FKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS*GSYIREVLKRYGFDGCRGVPTPVEGKVKI-------SAPEGRSGNSTEYRGMVGSLTYASTETRPDTAYVVHQIARRMEDPCREDFSTCKHIFRYLSSVPDLGITFGGKSNSHVPEGFVDVGWAEDIEDRKSITGYVFKLNGGAISWCSRKQQLV 1224
P + EAL PEA+ W+ MK E + + T + +L G++AI TKW+FK K +G++ RYKARLV +G SQ +G D+ ET +PV R ++L +F +AA+HD + +D A+LN ++EE+F+K P +S SG V RL KSLYGLKQ+ + WN+ L++ L RS D C+YF + + VA+YVDD+++ + +K + K+ +S +MKD+ S VLG+ V+ D I + YI VLKR+G D C V TP++ K+ S E + Y VGSL YA+ TRPD ++ V+ ++R ++P + + K + RYL + GI F + S G+ D WA D++ R+S +GYVF + G AISW S +Q+ V
Sbjct: 233 PVNLEEALNSPEADDWKRAMKEE---IESHKTNRTWVLTKLPEGKRAINTKWVFKTKRNAEGALVRYKARLVVKGCSQKQGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQPEGYSDNSGR---VCRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSEYSM--VYVAIYVDDVLVFSNDKKATQRIKNELSSKIKMKDMGSASSVLGMRVQRDEVKKLIKLDQSEYISSVLKRFGMDDCNAVATPLDLSQKLTLDMCPKSEEEKKEMEKVPYMEAVGSLLYAAQNTRPDISFAVNLLSRFSQNPGKGHWLALKRVMRYLKGTVNKGIVFRKSAQSLT--GYCDADWAGDLDQRRSTSGYVFIMQGAAISWSSHRQRTV 634
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A182GCJ5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GCJ5_AEDAL) HSP 1 Score: 265 bits (676), Expect = 5.430e-78 Identity = 152/416 (36.54%), Postives = 233/416 (56.01%), Query Frame = 1
Query: 1 NFTEAVSKGKPKSTAEALKGPEAEKWRAEMKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIPFVRRLRKSLYGLKQSGRNWNNTLDDFL------RSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSGEKIDE-FKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS*GSYIREVLKRYGFDGCRGVPTPVEGKVKISAPEGRSGNSTEYRGMVGSLTYASTETRPDTAYVVHQIARRMEDPCREDFSTCKHIFRYLSSVPDLGITFGGKSNSHVPEGFVDVGWAEDIEDRKSITGYVFKLNGGAISWCSRKQQLVT 1227
NF E + P S AE K + +KW+A M E ++ N T +L GRKAI +KW+FK K R+KARLVA+GF+Q +G D+ +T +PVA++ TL TV LA E+ + MD+ A+LN + EE+++ P +F +G V RL +S+YGLKQ+ R WN+ F+ RS+ D CLY G+ +++ +YVDD+++A S +I E K ++ F M D + + LG+ + DR G + IS Y +L+R+G C+ + TP+E ++K+ + + S YR +VG LTYAS TRPD A V+ ++ P E ++ K I RY+ D+G+ + + N + + F D WA D+ DR+S++GYV KL G + W +RKQQ V+
Sbjct: 214 NFVEDI----PNSIAELKKRDDWQKWKAAMDEEMSSMARNNT---WTLVKLPPGRKAITSKWVFKVKRGGAEKEDRFKARLVARGFTQKQGFDYTDTYSPVAKLDTLRTVLALANENRMFVHTMDVKTAFLNGELAEEIYMTQPEEFQQGNG---LVCRLHRSIYGLKQASRAWNDRFHSFISKLGFVRSSNDFCLYTRG--AGKEMMILVIYVDDILLASSSLQILEAVKRKLAAEFEMTDEGEIKQFLGMRIDRDRNTGVLKISQRDYFDGLLRRFGMMDCKPISTPMENRLKLQKGDEKQRTSKPYRELVGCLTYASITTRPDLAAAVNFFSQFQSCPNEEHWNHLKRILRYIKGTLDVGLVYKVEENEPLLQVFCDADWANDLTDRRSVSGYVVKLYGSTVGWITRKQQTVS 617 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig45553.11428.1 >prot_H-paniculata_contig45553.11428.1 ID=prot_H-paniculata_contig45553.11428.1|Name=mRNA_H-paniculata_contig45553.11428.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=231bp MKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKAback to top mRNA from alignment at H-paniculata_contig45553:232..1557- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig45553.11428.1 ID=mRNA_H-paniculata_contig45553.11428.1|Name=mRNA_H-paniculata_contig45553.11428.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1326bp|location=Sequence derived from alignment at H-paniculata_contig45553:232..1557- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig45553:232..1557- >mRNA_H-paniculata_contig45553.11428.1 ID=mRNA_H-paniculata_contig45553.11428.1|Name=mRNA_H-paniculata_contig45553.11428.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1386bp|location=Sequence derived from alignment at H-paniculata_contig45553:232..1557- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |