mRNA_H-paniculata_contig454.11403.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig454.11403.1
Unique NamemRNA_H-paniculata_contig454.11403.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot
Match: A0A6H5KXY4_9PHAE (YjgF_endoribonc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXY4_9PHAE)

HSP 1 Score: 234 bits (598), Expect = 2.950e-75
Identity = 114/158 (72.15%), Postives = 134/158 (84.81%), Query Frame = 2 
Query:   74 VGARGVHTEERLQKMGIELPTPRTPQASFVLTVRTGNLLYTAGHIPIKPDGTITVGKVGQELTEEEAIEAARNVAIQLMGTIKRDLGDLDRVKRVVKLLGFVNCVDGFTAQPKVVNGASDLFAEVFQEKGVHARSAVGTNALPRNVPVEIEAIIEIEE 547
            V  R VHTE +L+++GIELPTP+ P  +FV+TVRTGNLLYT+GH+P   +G  T GKVGQEL EEEA EAAR VAIQL+ +IK+DLGDLDRV R+VKL+GFVNC DGF  QPKVVNGASDLFAEVF E+GVH+RSAVGTNALP NVPVEIEAI+E ++
Sbjct:   14 VRPRRVHTEAKLKELGIELPTPKAPLGNFVMTVRTGNLLYTSGHLPTSLEGETTTGKVGQELNEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDD 171
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BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot
Match: A0A5A8CF06_CAFRO (YjgF_endoribonc domain-containing protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8CF06_CAFRO)

HSP 1 Score: 216 bits (551), Expect = 3.190e-68
Identity = 104/176 (59.09%), Postives = 137/176 (77.84%), Query Frame = 2 
Query:   20 TIMFRRSSSNGLRVMQRWVGARGVHTEERLQKMGIELPTPRTPQASFVLTVRTGNLLYTAGHIPIKPDGTITVGKVGQELTEEEAIEAARNVAIQLMGTIKRDLGDLDRVKRVVKLLGFVNCVDGFTAQPKVVNGASDLFAEVFQEKGVHARSAVGTNALPRNVPVEIEAIIEIEE 547
            T   R +S+  +R +     ARGVHTE ++++MG++LPTP TP A++++  R GNLL+TAGH+P++ DG +  GKVG++ T EEA  AAR  A+ ++GT+K ++GDLD+VKRVVKL GFVNCVD F+AQPKV+NGASD   EV  E+GVH RSAVGTNALP NVPVE+EAIIEI+E
Sbjct:    8 TAAMRATSAPAVRAL----AARGVHTEAKIEEMGLKLPTPPTPAANYIMCHRVGNLLFTAGHLPMQEDGQLFNGKVGKDFTTEEAYTAARQCALAILGTVKAEIGDLDKVKRVVKLTGFVNCVDAFSAQPKVLNGASDFMGEVLGERGVHVRSAVGTNALPMNVPVEVEAIIEIDE 179
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BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot
Match: A0A812PJA3_9DINO (TCP17 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PJA3_9DINO)

HSP 1 Score: 205 bits (522), Expect = 1.180e-63
Identity = 101/165 (61.21%), Postives = 131/165 (79.39%), Query Frame = 2 
Query:   56 RVMQRWV---GARGVHTEERLQKMGIELPTPRTPQASFVLTVRTGNLLYTAGHIPIKPDGTITVGKVGQELTEEEAIEAARNVAIQLMGTIKRDLGDLDRVKRVVKLLGFVNCVDGFTAQPKVVNGASDLFAEVFQEKGVHARSAVGTNALPRNVPVEIEAIIEI 541
            RVM R V   GA GVHTE +L+++G+ELP P   QA+++L+VR+G+ ++TAGH+P+  DGT+  GKVG +L  EEA  AA  V + ++ T+K +LGDLDRVKR+VKL GFVNCVD F+AQPKV+NG SDLF +VF  +GVHARSA+GTNALP NVPVEIEAI+E+
Sbjct:   15 RVMPRAVARLGACGVHTEAKLEELGLELPPPGKAQANYILSVRSGDTIFTAGHLPMMHDGTLMSGKVGVDLNTEEAYAAAELVGLNILSTLKAELGDLDRVKRIVKLNGFVNCVDSFSAQPKVINGISDLFGKVFGARGVHARSALGTNALPLNVPVEIEAIVEL 179
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BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot
Match: A0A8K1FK53_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FK53_PYTOL)

HSP 1 Score: 201 bits (511), Expect = 2.690e-62
Identity = 96/158 (60.76%), Postives = 122/158 (77.22%), Query Frame = 2 
Query:   74 VGARGVHTEERLQKMGIELPTPRTPQASFVLTVRTGNLLYTAGHIPIKPDGTITVGKVGQELTEEEAIEAARNVAIQLMGTIKRDLGDLDRVKRVVKLLGFVNCVDGFTAQPKVVNGASDLFAEVFQEKGVHARSAVGTNALPRNVPVEIEAIIEIEE 547
            VG R VH E RLQ++G  LP    P+ ++   VRTGN ++TAGH+P    G + VGK+G++LT E+  +AA +VA+ L+ T+K +LGDLD+VKR+VKL+GFVNCVDGFT QP V+NGASD   +VF EKGVHARSAVGTNALP NV VE+EAI+EIEE
Sbjct:   12 VGVRHVHIERRLQELGYALPAVAEPKGNYRTCVRTGNYVFTAGHLPQPTGGDLIVGKIGKDLTPEQGYDAAHHVALSLIATLKHELGDLDKVKRIVKLVGFVNCVDGFTGQPGVINGASDTIGKVFGEKGVHARSAVGTNALPLNVAVEVEAIVEIEE 169
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BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot
Match: A0A4D9CNR9_9STRA (YjgF_endoribonc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNR9_9STRA)

HSP 1 Score: 201 bits (511), Expect = 4.370e-62
Identity = 89/157 (56.69%), Postives = 128/157 (81.53%), Query Frame = 2 
Query:   77 GARGVHTEERLQKMGIELPTPRTPQASFVLTVRTGNLLYTAGHIPIKPDGTITVGKVGQELTEEEAIEAARNVAIQLMGTIKRDLGDLDRVKRVVKLLGFVNCVDGFTAQPKVVNGASDLFAEVFQEKGVHARSAVGTNALPRNVPVEIEAIIEIEE 547
            G++ +HTE +L +MG++LP+P  P+ +F + V++G ++Y +GH+P   +G +  GKVG E++ EEA  AA+ +A+ L+ ++K+++GDLDRVKR+VKL+GFVNCVDGF+ QP VVNGASD F +VF +KGVHARSAVGTNALP N+PVEIEAI+E+E+
Sbjct:   28 GSQKIHTEAKLTEMGLKLPSPGVPKGNFAMAVKSGKMIYLSGHLPTDANGQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 184
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BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot
Match: A0A662WS90_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WS90_9STRA)

HSP 1 Score: 200 bits (508), Expect = 2.440e-61
Identity = 94/156 (60.26%), Postives = 122/156 (78.21%), Query Frame = 2 
Query:   80 ARGVHTEERLQKMGIELPTPRTPQASFVLTVRTGNLLYTAGHIPIKPDGTITVGKVGQELTEEEAIEAARNVAIQLMGTIKRDLGDLDRVKRVVKLLGFVNCVDGFTAQPKVVNGASDLFAEVFQEKGVHARSAVGTNALPRNVPVEIEAIIEIEE 547
            AR VH E +L+++G  LP   TP+ ++   VR+GN +Y AGH+P    G I  GKVG++LT+EE  +AA  VA+ LM T+K+++GDLD++KRVVKL+GFVNCVDGFTAQP V+NGASD   +VF +KG+HARSAVGTNALP NV VEIEAI+E+EE
Sbjct:   50 ARSVHIERKLEELGYTLPAVATPKGNYRTAVRSGNTIYLAGHLPQPAGGDIITGKVGKDLTQEEGYDAAHYVALSLMATLKQEVGDLDKIKRVVKLVGFVNCVDGFTAQPAVINGASDTIGKVFGDKGIHARSAVGTNALPLNVAVEIEAIVEVEE 205
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BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot
Match: W7TB75_9STRA (Endoribonuclease l-psp n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TB75_9STRA)

HSP 1 Score: 200 bits (509), Expect = 4.420e-61
Identity = 89/157 (56.69%), Postives = 127/157 (80.89%), Query Frame = 2 
Query:   77 GARGVHTEERLQKMGIELPTPRTPQASFVLTVRTGNLLYTAGHIPIKPDGTITVGKVGQELTEEEAIEAARNVAIQLMGTIKRDLGDLDRVKRVVKLLGFVNCVDGFTAQPKVVNGASDLFAEVFQEKGVHARSAVGTNALPRNVPVEIEAIIEIEE 547
            G++ +HTE +L +MG++LP P  P+ +F + V++G ++Y +GH+P   +G +  GKVG E++ EEA  AA+ +A+ L+ ++K+++GDLDRVKR+VKL+GFVNCVDGF+ QP VVNGASD F +VF +KGVHARSAVGTNALP N+PVEIEAI+E+E+
Sbjct:   79 GSQKIHTEAKLTEMGLKLPPPGVPKGNFAMAVKSGKMIYLSGHLPTDANGQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 235
[Close]
BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot
Match: A0A4D9CNR0_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNR0_9STRA)

HSP 1 Score: 197 bits (500), Expect = 7.690e-61
Identity = 94/153 (61.44%), Postives = 120/153 (78.43%), Query Frame = 2 
Query:   89 VHTEERLQKMGIELPTPRTPQASFVLTVRTGNLLYTAGHIPIKPDGTITVGKVGQELTEEEAIEAARNVAIQLMGTIKRDLGDLDRVKRVVKLLGFVNCVDGFTAQPKVVNGASDLFAEVFQEKGVHARSAVGTNALPRNVPVEIEAIIEIEE 547
            V  E RL ++GI+LP    P+ ++ L VRTGNLL+ AGHIP+   G +  GKVG + + EE  EAA+ +AI L+ T+K +LGDLD+VKR+VKL+GFVNCVDGF+ QP VVNGASD F +VF +KGVHARSAVGTNALP N+PVEIEAI+E+E+
Sbjct:    2 VQIEARLAQLGIDLPDVIAPKGNYALAVRTGNLLFLAGHIPLLKSGVLMTGKVGADKSLEEGQEAAQVIAINLLATLKSELGDLDKVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 154
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BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot
Match: A0A485KSR4_9STRA (Aste57867_10922 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KSR4_9STRA)

HSP 1 Score: 197 bits (501), Expect = 9.720e-61
Identity = 91/155 (58.71%), Postives = 122/155 (78.71%), Query Frame = 2 
Query:   83 RGVHTEERLQKMGIELPTPRTPQASFVLTVRTGNLLYTAGHIPIKPDGTITVGKVGQELTEEEAIEAARNVAIQLMGTIKRDLGDLDRVKRVVKLLGFVNCVDGFTAQPKVVNGASDLFAEVFQEKGVHARSAVGTNALPRNVPVEIEAIIEIEE 547
            R VHTE R++++G  LP   TP+ ++   VR+GNLL+TAGH+P    G +  GKVG++LT E+  EAAR+VA+ +  T+K++LGDLDRVKR+VK++GFVNCVDGFTAQP V+NG SD   E+F E+GVHARSAVGTNALP  +PVE+E I+E+E+
Sbjct:   17 RRVHTENRIKELGYTLPAVATPKGNYRNVVRSGNLLFTAGHLPQPAGGELIKGKVGEDLTAEQGYEAARHVALAVCATLKQELGDLDRVKRIVKVVGFVNCVDGFTAQPSVINGFSDTVGEIFGERGVHARSAVGTNALPLGIPVEVECIVEVED 171
[Close]
BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot
Match: A0A2R5GI79_9STRA (Protein TCP17 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI79_9STRA)

HSP 1 Score: 197 bits (502), Expect = 9.780e-61
Identity = 93/155 (60.00%), Postives = 124/155 (80.00%), Query Frame = 2 
Query:   83 RGVHTEERLQKMGIELPTPRTPQASFVLTVRTGNLLYTAGHIPIKPDGTITVGKVGQELTEEEAIEAARNVAIQLMGTIKRDLGDLDRVKRVVKLLGFVNCVDGFTAQPKVVNGASDLFAEVFQEKGVHARSAVGTNALPRNVPVEIEAIIEIEE 547
            RGVHTE +L+K+G  LP   +P+ S+ L VR+GN ++TAGH+P   +G + VGKVG +L+ EEA +AA+  A+ ++ T+K +LGDLDRV RVVK++GFVNC DGF  QP+V+NGASDLFAEV  E+G+HARSAVGTN+LP N+PVE+EAI+EI E
Sbjct:   29 RGVHTEAKLEKLGYTLPQVASPKGSYQLCVRSGNQMFTAGHLPQPANGDLLVGKVGVDLSVEEANKAAQYCALSILATLKAELGDLDRVARVVKVVGFVNCADGFAQQPQVINGASDLFAEVLGERGLHARSAVGTNSLPLNIPVEVEAIVEISE 183
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXY4_9PHAE2.950e-7572.15YjgF_endoribonc domain-containing protein n=2 Tax=... [more]
A0A5A8CF06_CAFRO3.190e-6859.09YjgF_endoribonc domain-containing protein n=2 Tax=... [more]
A0A812PJA3_9DINO1.180e-6361.21TCP17 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A8K1FK53_PYTOL2.690e-6260.76Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A4D9CNR9_9STRA4.370e-6256.69YjgF_endoribonc domain-containing protein n=1 Tax=... [more]
A0A662WS90_9STRA2.440e-6160.26YjgF_endoribonc domain-containing protein n=2 Tax=... [more]
W7TB75_9STRA4.420e-6156.69Endoribonuclease l-psp n=2 Tax=Nannochloropsis gad... [more]
A0A4D9CNR0_9STRA7.690e-6161.44YjgF_endoribonc domain-containing protein n=2 Tax=... [more]
A0A485KSR4_9STRA9.720e-6158.71Aste57867_10922 protein n=1 Tax=Aphanomyces stella... [more]
A0A2R5GI79_9STRA9.780e-6160.00Protein TCP17 n=1 Tax=Hondaea fermentalgiana TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig454contigH-paniculata_contig454:16040..23092 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score235.3
Seed ortholog evalue2.1e-59
Seed eggNOG ortholog2880.D8LRH0
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.YjgF/chorismate_mutase-like, putative endoribonuclease
EggNOG OGs2QS7E@2759,COG0251@1
Ec32 ortholog descriptionputative Translation Initiation Inhibitor
Ec32 orthologEc-18_004500.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size705
Cds size528
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930361.3364058-UTR-H-paniculata_contig454:16039..161911622930361.3364058-UTR-H-paniculata_contig454:16039..16191Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig454 16040..16191 -
1691481257.539657-UTR-H-paniculata_contig454:16039..161911691481257.539657-UTR-H-paniculata_contig454:16039..16191Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig454 16040..16191 -
1622930361.4598396-UTR-H-paniculata_contig454:23067..230921622930361.4598396-UTR-H-paniculata_contig454:23067..23092Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig454 23068..23092 -
1691481257.60709-UTR-H-paniculata_contig454:23067..230921691481257.60709-UTR-H-paniculata_contig454:23067..23092Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig454 23068..23092 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930361.3537364-CDS-H-paniculata_contig454:16191..162991622930361.3537364-CDS-H-paniculata_contig454:16191..16299Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig454 16192..16299 -
1691481257.5524273-CDS-H-paniculata_contig454:16191..162991691481257.5524273-CDS-H-paniculata_contig454:16191..16299Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig454 16192..16299 -
1622930361.3713505-CDS-H-paniculata_contig454:16931..170531622930361.3713505-CDS-H-paniculata_contig454:16931..17053Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig454 16932..17053 -
1691481257.5636735-CDS-H-paniculata_contig454:16931..170531691481257.5636735-CDS-H-paniculata_contig454:16931..17053Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig454 16932..17053 -
1622930361.3859038-CDS-H-paniculata_contig454:20231..203101622930361.3859038-CDS-H-paniculata_contig454:20231..20310Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig454 20232..20310 -
1691481257.5732307-CDS-H-paniculata_contig454:20231..203101691481257.5732307-CDS-H-paniculata_contig454:20231..20310Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig454 20232..20310 -
1622930361.4047284-CDS-H-paniculata_contig454:22336..224281622930361.4047284-CDS-H-paniculata_contig454:22336..22428Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig454 22337..22428 -
1691481257.5873287-CDS-H-paniculata_contig454:22336..224281691481257.5873287-CDS-H-paniculata_contig454:22336..22428Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig454 22337..22428 -
1622930361.4186797-CDS-H-paniculata_contig454:22940..230671622930361.4186797-CDS-H-paniculata_contig454:22940..23067Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig454 22941..23067 -
1691481257.5991526-CDS-H-paniculata_contig454:22940..230671691481257.5991526-CDS-H-paniculata_contig454:22940..23067Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig454 22941..23067 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig454.11403.1prot_H-paniculata_contig454.11403.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig454 16192..23067 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig454.11403.1

>prot_H-paniculata_contig454.11403.1 ID=prot_H-paniculata_contig454.11403.1|Name=mRNA_H-paniculata_contig454.11403.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=176bp
MFRRSSSNGLRVMQRWVGARGVHTEERLQKMGIELPTPRTPQASFVLTVR
TGNLLYTAGHIPIKPDGTITVGKVGQELTEEEAIEAARNVAIQLMGTIKR
DLGDLDRVKRVVKLLGFVNCVDGFTAQPKVVNGASDLFAEVFQEKGVHAR
SAVGTNALPRNVPVEIEAIIEIEED*
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mRNA from alignment at H-paniculata_contig454:16040..23092-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig454.11403.1 ID=mRNA_H-paniculata_contig454.11403.1|Name=mRNA_H-paniculata_contig454.11403.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7053bp|location=Sequence derived from alignment at H-paniculata_contig454:16040..23092- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAACAGACACGTGCAACCTACGATCATGTTTAGGAGGTCGTCAAGCAATG
GGTTGAGGGTGATGCAGCGGTGGGTAGGAGCACGAGGTGTCCATACGGAG
GAGAGACTGCAGAAAATGGGCATCGAACTGCCCACACCGCGAACTCCACA
AGGTACTACTGCCCGTGCTAGATTAATAGTTTGAAGTGGAAGTTAAGAGA
TGGTGTCATGTGGATGTTTCTGGAACAACGTGGTCACATCGCGCCCAGTG
ACAACCACAGCATGCAACATTTGTTTCCTGAAATCATTGGATGTGGATTG
CAATCCTTATGTAGGATATGTGTCATGGGTGTCTGGTGCGGTTTATCTGC
TACACAGGAGGTCTCATCTATGAAAGCAGTTTCTCCCCTTCACATGCAGT
CCTGCATGTTCAACACCGTCATGTGTCCTTACAATCTCAAAAAGGTCCAT
TCTTTTAAAGGGCGGTTTCGCCCGCAGCTATTTCTCTGCGCCCAGTACCG
CACGGGGGTGTTGCAATTCATTACCGTACTACTGATAGGTGTGGTTTATC
GCAATTCAAAATTGGAGGCCCTTGGCTTATATTGATCCATCTCTCGTGTA
CTCATGGTTGCACGTGCATGTTTTCATGCTACCCTCCTCTTCTTTCGTTG
CCAACGAACTACAGCGAGCTTTGTGTTGACTGTGCGCACCGGCAATCTTC
TCTACACAGCAGGGCACATACCCATCAAGCCAGACGGCACTATTACTGTG
GGAAAGGTGAGGGGTACATACGAATCGACCCACGAACAAGGGTTTTCGAA
ACTGTAACCGTGGGCGCTGAAAGTGATGATCATATGACCTGTTGATGGCG
GTGGATAACACTCCGCGCGCATGTCCGCCCGCCGAACTTGAAGATTTACT
CACAATAACTGATGAACGGAGGAATCTGACGCCGAAGAGCACTTTTATCA
AGCGCTGTTAACTGCCAACTTTGCGGGCAGGGCTATTATAATAGTGTTGG
CACGGGCCCTAATATTAATGTCGCATACTAAAGTTGCGAAATGACGTTTC
TTCTTTCCCTCCGTTTCTTGTCCAAAGACGCGGATAGTAGAGTCGCCTGC
CGGTGCCTAGCCTCCCCCTCTGTCTGACTCCCTTCCTTCTGCCTTAGTTG
ACGGTCCACTCGACGGCATCCAACAGCACCCTCGCACAGTACAGTAGGTA
CAGGGGACCCCATGCCCTTGGTGGTACTCCATCACGCCCCTGTCCTTCCC
GAGGATGAGGATGCCGACACGTTGAAGGGCAAAGCTAGAGAACCTTGCCG
TCCCAGTCAAAAGCTCTTTGCTAAAACAGCAGCGGTTAGCGAGACAATGG
ACCGCAGTCACGAAAATCCCCCTAGAAATTTGAGAAAGACGAAGCAATAC
CCTTGGTGCTCCTGACTCATTTCTTAGCATCCACGGAAGTCCCTTTCCCT
CTCCTAGTCTCTCTCTTGCTGGTAAGAAGCTCGTCAGTGATGTAGGCCCG
GTATTGCAGTAGAAAGTCGGTCATTAGTACGATCTGTAGTAGGTTTGACC
AAGGCGAGAGCAAGCAGAGATGGCCCGGTCTAACGCTGCACAAAATGGCC
GTCCTCAAACGCATAGTTGGATCCGGGACAGACTGTAATCACTACGTGAT
ATTCCACGAGTATCCCTTCTTCTTGCCAACAGCACAGGTCAAGTCCACAG
GTGCACAGACATATACTTCGTTCGGGTCGCGCGTGTGTTCTCTTTTCTGG
TCTCAACGTACTGTCTACTTCCGAGCGCCCTTCAACGCTTGGCTCTGCCT
CTGCTCGTCCCTCTGGACCAACTCGATAGCTACGTGTGAGCGAGGACGGC
AATTCTCGCAAGGGTGCAGGCCGCAAAAATCCTCCCGTAGAGGGAACGTG
ACAGTCTCTGTCTAGACCAACCGCTGTGAGGCAAAAAAACGCCGGGACCT
TGCTTATGCCGATACCACGGCATTGAAAAGAAACAGAAAACGTTCGTCGA
CGTGTCGTAGATGCGTAGCTAGCGTAGCGGACTACGCATATGAATAGGCT
AAGAAAAAAAAACGCCGCCAAAGCGGGGTAGCACGCTGACCAGCGGCAGT
GGAACTTGACCTTTAAAACGATTTCAGGTATAGTGTCGCTTTTTGTGATC
ACATATGCCATCAAGACCTGCCGTTTCTCGAGGGATGTATTCTCGCGTAT
TAGTACCGTTCTCTTGTCTCTAACGAGCAGAGATGCTCCCACCTTCCGCC
ATCATCTGCTGCTAGCGTATCACCTTGGAAGATGGTGCGGTGTCTAAATG
ATTAGTCCTGATTGATGAATGCCCCCCCCCTGGATTTAGACACGCTGTTG
ATGGGAAAGGGGCCGTTCATGGGTATGATGTTACCCCTAATAATTGCATC
AAAATCGCAGGTTTTCCCTGCAAGTCCTCATCAATTTATATGATAGTGAC
GATAATGATGCTCCTCCCAAAGCAGTTTCCTTTCTTTATATCCGAGTGTT
TTCACCTAAGTGTCGCCTAAGCCGCAGAGGAATAAATAACTCTGATCCAT
TAAAGGAAATGCAGACACTCAGAAATCTTCCGAAGAGTGGAAGTAGCGGA
AAGGGTTTTTTGCCTGACCTTCCGGGGGTTAAAAAAAAAAATGCTAGTTT
TTACTGAACAGGCATTTGCAGGTTACAAAGTCCGCTTTTAGGTTCAACCT
ATTTCTGTTTTCCCCACCTTTTTTTTTTTTTTTTACATTCTTGTGTTAAC
TGTAACTTATTTTCAATGATTTTTGTCGTGAGGTTGGCCAAGAATTGACT
GAAGAGGAAGCGATCGAGGCAGCGCGAAACGTGGCCATCCAGCTCATGGG
AACTATCAAAAGTGAGTTAAACTGGTGGCGTGTATGTTTCGAAAAATGCC
CAGATGTGCCAACAAAAGGCTACAATCTGAAAAAATCCACATATCTGCTC
ATTGACGTGATGGCAATTTCCTGCGTTTGTACTAACCCGTGGCACCTTCA
GCTCGGCGTAGCTTGTCACCTTTTGCTCGAAGCTCAGGGATGAGCTTGTT
GTTGCCCACGTAGTGGTTGCTTGCAGGCCGCTGTACAATTGCCTTGGAGT
GGAAATCGAGCGTCATGCCTCGTACCTCGCATGCTGTGATTATTTTACCA
GCTGTAGGTTCAATTGCACGCATTTTTTTTCATAATGTTGCCCAATAGGG
CTTGAATGCGGACGCTATGGCACCTCAGAGCTCCTGTGATATTATTACTC
TTGCTGTTTGCCATAGCCTTGCTCGCGATACTCTCGGTCAGCCCCTATTG
ACTTCTGCCATGCTAGGCGTGTTTTGTCCGTCTTTGCCGCTGCCCTGTCC
GGCGATTGTTACGCAGTATTCTGTATCTGAGTGCATGACGGAGTGATGGC
ACCAACATCCTTGTCCCCGACTGGCAACTAGTGTTACAGTATTGACATTG
CCTCAAAAATTGCCCTGTCTGACTGTCCGCATAGGGCCGTTTCGTCCATC
TCGACTTACTGGATGAAACCGTCCTACGTAAAGAGTGCCTATTTCGCCAT
CAGTCTTTCTGACCTGTACGCTTAGAACAAATGTTACAAGCGTAGATATT
GCGTATAGTGTTTGAAAAGTAGTCATCTCTCGCAAACTTCATGTTTCTTG
AGTGCGCCTCTTTCTAGTCTGACTCTTCGCCTCTGCCAAGGCCTGTGCGT
AGGATGTCCTCAAACCTGTTCCTATTTAGAATCGTTTTCACCCAATATGG
TGAGCTCATCGAGGAGTGGGTGCACCTTGAGGATAACAATGTCGGGGTCG
TAGTCCTTTTTCACACGTAGAGAGGTGATGGTCTCGGTCAGAATGCGGCA
ACGTTGCTCCCTTGAAGTCTGGTAGCTGTTGGTAAGTACCGTCCAAGACC
GTGTCCATCTACTTGCTACACGTGCGTCCTGCTCTGAAATCCAGAGCTGG
TAGAAACACGTGTTGTGTCCTCGACCTGTGAAGTAGCGTACGCTCAATAG
TTCCCCGTTCGCTCTCTTTTCTCGTCCATCGCGTGCATTAGCTGGACGTG
TTTCTCTATCCGTGAAGTTGCAGGCATGCCTTCTCGAGGCTGTCAGCAAA
CCTCAAAATTTTCTTGACCCTTCTGGAAATCTGTGAGTAGTCTTATCAGA
CGTCATTATACCCTTGGTGGGCGTGGTGACGTTTCTGGCGGGATCTTCTG
TTCACTATCCCTGTCTCGCACGGACTGGGCCCAGTTTGACATGCCAAAAC
ACACTCCCTCGGCCATTTGCTTTCCAAATTAACGAGGTTTGACCTGGAAC
TTCAAGGCGATGAGTACTACATTGTTACGTGGTTAATGCCGAGGCTTTCA
CGAATGTATTTTTTGCTCCAATTTTCAGGACGTCATTGTAATTTTTCTTT
TCAAAAACACATACATATATATATATGCCCCGATCAACGGATGAAAGAAA
AAAAATGTACTCTTGAGAGCGTCGGATTTTTGACGATGCGCTCATATCCT
GAAAAAAGAGATCACGTCAAATTTCCCAAAACTGGAGTGCGAAACAGGCG
CCGAGTCAAATCAATTACGTACAAAAGCTGAAAAATCAGTACAACGTACC
ACAAAATTCGCAACAAAAGAATGAAAGGAAAGTTAAGTCCGTGAAAAACT
CGATAATTGTGATGCACTCATCTCGGAAACTCGGGTCGATATTCTGGGTT
CGGAGTCAGAAATAGCTGTCGGAGGTAACATTTACATCGACGAAAAAGTC
CAATTGAATTTACAGTGGTATAGATATTTTTTCCCCTTTCTGTTTGGGCA
TAAAATTTGAACGGCAATCAGTTGGGAGTCGGATGCCCAATAATGTTGAA
TCCATTCGAATTAACGTGTATGCGAAGCTTACTAAAAGTAGCAAGCCATG
GGGCACACTGAACTAACACCTAGGAGAAAAGTGCGGGCAGTGTGATACTC
AATCTGTTGCAGTTGAGGCCCATGACCTGTTGCAGTTTGGCGGTTAACTT
TGTGTGAGAGTTGCTAATGTATCGACCAATGTACCGCACCCGACATGCAA
TAAGGCGAGTTCGCTCAGAGCGACGTTGGAGCCTCGCGGTGAGCTCCTTC
GGTGTCAACCACAAACATTTCATAATCGACGCACTGAAAATTCCAACTGA
AGTTCGTAGATTGTCTTGTACACTGGAGGGGTGCTGGCTGCAGTAGGTGC
AATATTCCTGCATTGCCATCATGTGGGCGACACATGCAGCTGACGTGTAA
TTATGGCCGCGCGGAAACTGGCCGCTATAGATAAGAGCGGTCTTCAGGGG
GTTTCGATGCCGTCCTATTTTCAGCACAGGTCCCGTCTATCGTGCTTCGC
TCGTGTCCCATGCCTGCTCCTTCCTCTGTGTTGCGATAAGCCTGTGTTCT
CTCTGCCAGTCCTTGGTGACGATTCGTCTTGGCCTGTAGTTTGTCTGCGA
GCATCAACGTGTGCTCATGGAAAAAATAGGCAACAAGAAGGCGTGCTCAA
GAACTATTCGAGGGATGCAAAGTAATGTCGAACGGTCGAGAAGGAAAAGT
GACCATGGAAAACGAGCACAGCACGAAAGACGAGAGGCGGTACGGGTAGG
AGAACCACGGCGACGCCGATGAAAACAGTTCCACTATACGCCGCACGTAC
TAATTCCAGCGCAGCCATGAGATATAAAAACTTGTGTCGATTCGGTTGGT
GGGAACGCTAGCCTCCTCGACTTGCCGTTGGAATTATGCACTCATCACGA
GGAAATCTACCAAGACCATGTTTATCGATTGTGGCTCGAACTGGGAACCT
GTGGGGTGGCACTGAGGGACCTTTTTCGCGGAGCTCGAGCGTCGCTCGGC
GGGCATCTACTTGACTCTTTGTGGATTTAGTCACATTGCTTGCTATTTTG
CCAGTTTTGCAAACGCACATGGCGGTAAATTCTAACGGCTCGTTCTCGTG
GCGGTGTTTGCTTGCTTTTTTAGATAGGGTACAATTTCCGTCTGCACCAT
AACATACACACCGTTGTGCCGATAATTCTTCATGTTTAGGGGATTTGGGA
GATCTAGACAGAGTGAAGCGAGTCGTGAAGCTACTTGGGTTCGTGAACTG
CGTGGACGGTTTCACGGCACAGCCGAAGGTCGTTAATGGCGCTAGCGATC
TGTTCGCGGAGGTAAAGTACAGTGATCGGATAGATATGTAGACTAATGCA
TCATTATTGAGCATATGAAAAAATTATCTAGGTTTCACAGCAACACAAAG
CAATGTTGTCAATGCCCGGCACAGCCGTTAGACGAGGAGTTTTGGCGTGG
AGTTTTGAGTCGCCGTACTGCGTTATGACTCGACGACCGTGGTCGCCCCT
GTATTTTAAATGGGGTTGGAGTTGTTGGGAATGTGGATCCCAAGTATTGA
ATTGTAGTGAAGCAAGCCGCGAAAATACCTATTATCGTTTTTTTTTCACG
TGTGACATATTGAATGCAACGTTGCAAACTTACTTACCTTAGCAGCGTTA
GCTTTGGGTTTCAAAATCATTGCTGTGTACTTGTATAGATTACATGATTT
GATCTGTAACTTCGGTGATACAAGCGATTAAGACACAAGCATACATACGA
ACGAACGTAACGTTTCAAATGATGGCTAAAGCATTCTTGATAAAGGGCCG
GAAATCTACTTGCCTTCTAATAGGTGGTGATCGTGGTGGTTGTTGTCGTC
CACGTCGTCTTCATCGTTTTTGTCATGATCCATTGTTGCCTAAGGCCCGA
CGTGTCCCTGCCTTTCGCACGTATCCCCTGACGCCATCATCAGGTGTTCC
AAGAAAAGGGCGTGCATGCGCGATCTGCGGTGGGCACAAACGCTTTGCCC
CGAAACGTTCCGGTAGAAATAGAAGCTATCATCGAGATCGAGGAAGACTA
GAACGCCGCTGTTACCACAGTTACTCTTCAGCGTGTATAGGCCACCCTGG
ATGATAACGATACTTGCCCTCTTCATGGGTTATTTTCCCCGAGGAAGTAG
GACCCTGTCATATCGAGAGACAGCCCACGTCTACTCTGGAGCAAGACTAA
TAC
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Coding sequence (CDS) from alignment at H-paniculata_contig454:16040..23092-

>mRNA_H-paniculata_contig454.11403.1 ID=mRNA_H-paniculata_contig454.11403.1|Name=mRNA_H-paniculata_contig454.11403.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1056bp|location=Sequence derived from alignment at H-paniculata_contig454:16040..23092- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTTAGGAGGTCGTCAAGCAATGGGTTGAGGGTGATGCAGCGGTGGGT
AGGAGCACGAGGTGTCCATACGGAGGAGAGACTGCAGAAAATGGGCATCG
AACTGCCCACACCGCGAACTCCACAAGATGTTTAGGAGGTCGTCAAGCAA
TGGGTTGAGGGTGATGCAGCGGTGGGTAGGAGCACGAGGTGTCCATACGG
AGGAGAGACTGCAGAAAATGGGCATCGAACTGCCCACACCGCGAACTCCA
CAAGCGAGCTTTGTGTTGACTGTGCGCACCGGCAATCTTCTCTACACAGC
AGGGCACATACCCATCAAGCCAGACGGCACTATTACTGTGGGAAAGCGAG
CTTTGTGTTGACTGTGCGCACCGGCAATCTTCTCTACACAGCAGGGCACA
TACCCATCAAGCCAGACGGCACTATTACTGTGGGAAAGGTTGGCCAAGAA
TTGACTGAAGAGGAAGCGATCGAGGCAGCGCGAAACGTGGCCATCCAGCT
CATGGGAACTATCAAAAGTTGGCCAAGAATTGACTGAAGAGGAAGCGATC
GAGGCAGCGCGAAACGTGGCCATCCAGCTCATGGGAACTATCAAAAGGGA
TTTGGGAGATCTAGACAGAGTGAAGCGAGTCGTGAAGCTACTTGGGTTCG
TGAACTGCGTGGACGGTTTCACGGCACAGCCGAAGGTCGTTAATGGCGCT
AGCGATCTGTTCGCGGAGGGGATTTGGGAGATCTAGACAGAGTGAAGCGA
GTCGTGAAGCTACTTGGGTTCGTGAACTGCGTGGACGGTTTCACGGCACA
GCCGAAGGTCGTTAATGGCGCTAGCGATCTGTTCGCGGAGGTGTTCCAAG
AAAAGGGCGTGCATGCGCGATCTGCGGTGGGCACAAACGCTTTGCCCCGA
AACGTTCCGGTAGAAATAGAAGCTATCATCGAGATCGAGGAAGACTAGGT
GTTCCAAGAAAAGGGCGTGCATGCGCGATCTGCGGTGGGCACAAACGCTT
TGCCCCGAAACGTTCCGGTAGAAATAGAAGCTATCATCGAGATCGAGGAA
GACTAG
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