prot_H-paniculata_contig454.11403.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig454.11403.1
Unique Name	prot_H-paniculata_contig454.11403.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	176

Homology

[Close]

BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot
Match: A0A6H5KXY4_9PHAE (YjgF_endoribonc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXY4_9PHAE)

HSP 1 Score: 234 bits (598), Expect = 3.280e-76
Identity = 120/174 (68.97%), Postives = 141/174 (81.03%), Query Frame = 0

Query:    1 MFRRSSSNGLRVMQRWVGARGVHTEERLQKMGIELPTPRTPQASFVLTVRTGNLLYTAGHIPIKPDGTITVGKVGQELTEEEAIEAARNVAIQLMGTIKRDLGDLDRVKRVVKLLGFVNCVDGFTAQPKVVNGASDLFAEVFQEKGVHARSAVGTNALPRNVPVEIEAIIEIEE 174
            M RR SS    V +  V  R VHTE +L+++GIELPTP+ P  +FV+TVRTGNLLYT+GH+P   +G  T GKVGQEL EEEA EAAR VAIQL+ +IK+DLGDLDRV R+VKL+GFVNC DGF  QPKVVNGASDLFAEVF E+GVH+RSAVGTNALP NVPVEIEAI+E ++
Sbjct:    1 MLRRVSSL---VGRAAVRPRRVHTEAKLKELGIELPTPKAPLGNFVMTVRTGNLLYTSGHLPTSLEGETTTGKVGQELNEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDD 171

[Close]

BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot
Match: A0A5A8CF06_CAFRO (YjgF_endoribonc domain-containing protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8CF06_CAFRO)

HSP 1 Score: 216 bits (549), Expect = 7.390e-69
Identity = 101/160 (63.12%), Postives = 131/160 (81.88%), Query Frame = 0

Query:   15 RWVGARGVHTEERLQKMGIELPTPRTPQASFVLTVRTGNLLYTAGHIPIKPDGTITVGKVGQELTEEEAIEAARNVAIQLMGTIKRDLGDLDRVKRVVKLLGFVNCVDGFTAQPKVVNGASDLFAEVFQEKGVHARSAVGTNALPRNVPVEIEAIIEIEE 174
            R + ARGVHTE ++++MG++LPTP TP A++++  R GNLL+TAGH+P++ DG +  GKVG++ T EEA  AAR  A+ ++GT+K ++GDLD+VKRVVKL GFVNCVD F+AQPKV+NGASD   EV  E+GVH RSAVGTNALP NVPVE+EAIIEI+E
Sbjct:   20 RALAARGVHTEAKIEEMGLKLPTPPTPAANYIMCHRVGNLLFTAGHLPMQEDGQLFNGKVGKDFTTEEAYTAARQCALAILGTVKAEIGDLDKVKRVVKLTGFVNCVDAFSAQPKVLNGASDFMGEVLGERGVHVRSAVGTNALPMNVPVEVEAIIEIDE 179

[Close]

BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot
Match: A0A812PJA3_9DINO (TCP17 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PJA3_9DINO)

HSP 1 Score: 205 bits (522), Expect = 1.390e-64
Identity = 101/165 (61.21%), Postives = 131/165 (79.39%), Query Frame = 0

Query:   11 RVMQRWV---GARGVHTEERLQKMGIELPTPRTPQASFVLTVRTGNLLYTAGHIPIKPDGTITVGKVGQELTEEEAIEAARNVAIQLMGTIKRDLGDLDRVKRVVKLLGFVNCVDGFTAQPKVVNGASDLFAEVFQEKGVHARSAVGTNALPRNVPVEIEAIIEI 172
            RVM R V   GA GVHTE +L+++G+ELP P   QA+++L+VR+G+ ++TAGH+P+  DGT+  GKVG +L  EEA  AA  V + ++ T+K +LGDLDRVKR+VKL GFVNCVD F+AQPKV+NG SDLF +VF  +GVHARSA+GTNALP NVPVEIEAI+E+
Sbjct:   15 RVMPRAVARLGACGVHTEAKLEELGLELPPPGKAQANYILSVRSGDTIFTAGHLPMMHDGTLMSGKVGVDLNTEEAYAAAELVGLNILSTLKAELGDLDRVKRIVKLNGFVNCVDSFSAQPKVINGISDLFGKVFGARGVHARSALGTNALPLNVPVEIEAIVEL 179

[Close]

BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot
Match: A0A8K1FK53_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FK53_PYTOL)

HSP 1 Score: 201 bits (510), Expect = 4.530e-63
Identity = 96/158 (60.76%), Postives = 122/158 (77.22%), Query Frame = 0

Query:   17 VGARGVHTEERLQKMGIELPTPRTPQASFVLTVRTGNLLYTAGHIPIKPDGTITVGKVGQELTEEEAIEAARNVAIQLMGTIKRDLGDLDRVKRVVKLLGFVNCVDGFTAQPKVVNGASDLFAEVFQEKGVHARSAVGTNALPRNVPVEIEAIIEIEE 174
            VG R VH E RLQ++G  LP    P+ ++   VRTGN ++TAGH+P    G + VGK+G++LT E+  +AA +VA+ L+ T+K +LGDLD+VKR+VKL+GFVNCVDGFT QP V+NGASD   +VF EKGVHARSAVGTNALP NV VE+EAI+EIEE
Sbjct:   12 VGVRHVHIERRLQELGYALPAVAEPKGNYRTCVRTGNYVFTAGHLPQPTGGDLIVGKIGKDLTPEQGYDAAHHVALSLIATLKHELGDLDKVKRIVKLVGFVNCVDGFTGQPGVINGASDTIGKVFGEKGVHARSAVGTNALPLNVAVEVEAIVEIEE 169

[Close]

BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot
Match: A0A4D9CNR9_9STRA (YjgF_endoribonc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNR9_9STRA)

HSP 1 Score: 201 bits (510), Expect = 7.370e-63
Identity = 89/157 (56.69%), Postives = 128/157 (81.53%), Query Frame = 0

Query:   18 GARGVHTEERLQKMGIELPTPRTPQASFVLTVRTGNLLYTAGHIPIKPDGTITVGKVGQELTEEEAIEAARNVAIQLMGTIKRDLGDLDRVKRVVKLLGFVNCVDGFTAQPKVVNGASDLFAEVFQEKGVHARSAVGTNALPRNVPVEIEAIIEIEE 174
            G++ +HTE +L +MG++LP+P  P+ +F + V++G ++Y +GH+P   +G +  GKVG E++ EEA  AA+ +A+ L+ ++K+++GDLDRVKR+VKL+GFVNCVDGF+ QP VVNGASD F +VF +KGVHARSAVGTNALP N+PVEIEAI+E+E+
Sbjct:   28 GSQKIHTEAKLTEMGLKLPSPGVPKGNFAMAVKSGKMIYLSGHLPTDANGQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 184

[Close]

BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot
Match: A0A662WS90_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WS90_9STRA)

HSP 1 Score: 199 bits (507), Expect = 4.120e-62
Identity = 94/156 (60.26%), Postives = 122/156 (78.21%), Query Frame = 0

Query:   19 ARGVHTEERLQKMGIELPTPRTPQASFVLTVRTGNLLYTAGHIPIKPDGTITVGKVGQELTEEEAIEAARNVAIQLMGTIKRDLGDLDRVKRVVKLLGFVNCVDGFTAQPKVVNGASDLFAEVFQEKGVHARSAVGTNALPRNVPVEIEAIIEIEE 174
            AR VH E +L+++G  LP   TP+ ++   VR+GN +Y AGH+P    G I  GKVG++LT+EE  +AA  VA+ LM T+K+++GDLD++KRVVKL+GFVNCVDGFTAQP V+NGASD   +VF +KG+HARSAVGTNALP NV VEIEAI+E+EE
Sbjct:   50 ARSVHIERKLEELGYTLPAVATPKGNYRTAVRSGNTIYLAGHLPQPAGGDIITGKVGKDLTQEEGYDAAHYVALSLMATLKQEVGDLDKIKRVVKLVGFVNCVDGFTAQPAVINGASDTIGKVFGDKGIHARSAVGTNALPLNVAVEIEAIVEVEE 205

[Close]

BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot
Match: W7TB75_9STRA (Endoribonuclease l-psp n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TB75_9STRA)

HSP 1 Score: 200 bits (508), Expect = 7.460e-62
Identity = 89/157 (56.69%), Postives = 127/157 (80.89%), Query Frame = 0

Query:   18 GARGVHTEERLQKMGIELPTPRTPQASFVLTVRTGNLLYTAGHIPIKPDGTITVGKVGQELTEEEAIEAARNVAIQLMGTIKRDLGDLDRVKRVVKLLGFVNCVDGFTAQPKVVNGASDLFAEVFQEKGVHARSAVGTNALPRNVPVEIEAIIEIEE 174
            G++ +HTE +L +MG++LP P  P+ +F + V++G ++Y +GH+P   +G +  GKVG E++ EEA  AA+ +A+ L+ ++K+++GDLDRVKR+VKL+GFVNCVDGF+ QP VVNGASD F +VF +KGVHARSAVGTNALP N+PVEIEAI+E+E+
Sbjct:   79 GSQKIHTEAKLTEMGLKLPPPGVPKGNFAMAVKSGKMIYLSGHLPTDANGQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 235

[Close]

BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot
Match: A0A4D9CNR0_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNR0_9STRA)

HSP 1 Score: 196 bits (499), Expect = 1.310e-61
Identity = 94/153 (61.44%), Postives = 120/153 (78.43%), Query Frame = 0

Query:   22 VHTEERLQKMGIELPTPRTPQASFVLTVRTGNLLYTAGHIPIKPDGTITVGKVGQELTEEEAIEAARNVAIQLMGTIKRDLGDLDRVKRVVKLLGFVNCVDGFTAQPKVVNGASDLFAEVFQEKGVHARSAVGTNALPRNVPVEIEAIIEIEE 174
            V  E RL ++GI+LP    P+ ++ L VRTGNLL+ AGHIP+   G +  GKVG + + EE  EAA+ +AI L+ T+K +LGDLD+VKR+VKL+GFVNCVDGF+ QP VVNGASD F +VF +KGVHARSAVGTNALP N+PVEIEAI+E+E+
Sbjct:    2 VQIEARLAQLGIDLPDVIAPKGNYALAVRTGNLLFLAGHIPLLKSGVLMTGKVGADKSLEEGQEAAQVIAINLLATLKSELGDLDKVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 154

[Close]

BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot
Match: A0A485KSR4_9STRA (Aste57867_10922 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KSR4_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.650e-61
Identity = 91/155 (58.71%), Postives = 122/155 (78.71%), Query Frame = 0

Query:   20 RGVHTEERLQKMGIELPTPRTPQASFVLTVRTGNLLYTAGHIPIKPDGTITVGKVGQELTEEEAIEAARNVAIQLMGTIKRDLGDLDRVKRVVKLLGFVNCVDGFTAQPKVVNGASDLFAEVFQEKGVHARSAVGTNALPRNVPVEIEAIIEIEE 174
            R VHTE R++++G  LP   TP+ ++   VR+GNLL+TAGH+P    G +  GKVG++LT E+  EAAR+VA+ +  T+K++LGDLDRVKR+VK++GFVNCVDGFTAQP V+NG SD   E+F E+GVHARSAVGTNALP  +PVE+E I+E+E+
Sbjct:   17 RRVHTENRIKELGYTLPAVATPKGNYRNVVRSGNLLFTAGHLPQPAGGELIKGKVGEDLTAEQGYEAARHVALAVCATLKQELGDLDRVKRIVKVVGFVNCVDGFTAQPSVINGFSDTVGEIFGERGVHARSAVGTNALPLGIPVEVECIVEVED 171

[Close]

BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot
Match: A0A2R5GI79_9STRA (Protein TCP17 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI79_9STRA)

HSP 1 Score: 197 bits (501), Expect = 1.660e-61
Identity = 93/155 (60.00%), Postives = 124/155 (80.00%), Query Frame = 0

Query:   20 RGVHTEERLQKMGIELPTPRTPQASFVLTVRTGNLLYTAGHIPIKPDGTITVGKVGQELTEEEAIEAARNVAIQLMGTIKRDLGDLDRVKRVVKLLGFVNCVDGFTAQPKVVNGASDLFAEVFQEKGVHARSAVGTNALPRNVPVEIEAIIEIEE 174
            RGVHTE +L+K+G  LP   +P+ S+ L VR+GN ++TAGH+P   +G + VGKVG +L+ EEA +AA+  A+ ++ T+K +LGDLDRV RVVK++GFVNC DGF  QP+V+NGASDLFAEV  E+G+HARSAVGTN+LP N+PVE+EAI+EI E
Sbjct:   29 RGVHTEAKLEKLGYTLPQVASPKGSYQLCVRSGNQMFTAGHLPQPANGDLLVGKVGVDLSVEEANKAAQYCALSILATLKAELGDLDRVARVVKVVGFVNCADGFAQQPQVINGASDLFAEVLGERGLHARSAVGTNSLPLNIPVEVEAIVEISE 183

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig454.11403.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KXY4_9PHAE	3.280e-76	68.97	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A5A8CF06_CAFRO	7.390e-69	63.13	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A812PJA3_9DINO	1.390e-64	61.21	TCP17 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2...	[more]
A0A8K1FK53_PYTOL	4.530e-63	60.76	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A4D9CNR9_9STRA	7.370e-63	56.69	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]
A0A662WS90_9STRA	4.120e-62	60.26	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
W7TB75_9STRA	7.460e-62	56.69	Endoribonuclease l-psp n=2 Tax=Nannochloropsis gad...	[more]
A0A4D9CNR0_9STRA	1.310e-61	61.44	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A485KSR4_9STRA	1.650e-61	58.71	Aste57867_10922 protein n=1 Tax=Aphanomyces stella...	[more]
A0A2R5GI79_9STRA	1.660e-61	60.00	Protein TCP17 n=1 Tax=Hondaea fermentalgiana TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	PFAM	PF14588	YjgF_endoribonc	coord: 25..171 e-value: 2.3E-24 score: 86.2
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 15..173 e-value: 2.6E-61 score: 207.8
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 23..172
None	No IPR available	PANTHER	PTHR43760	FAMILY NOT NAMED	coord: 23..174

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig454	contig	H-paniculata_contig454:16192..23067 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig454.11403.1	mRNA_H-paniculata_contig454.11403.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig454 16040..23092 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig454.11403.1 ID=prot_H-paniculata_contig454.11403.1|Name=mRNA_H-paniculata_contig454.11403.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=176bp
MFRRSSSNGLRVMQRWVGARGVHTEERLQKMGIELPTPRTPQASFVLTVR
TGNLLYTAGHIPIKPDGTITVGKVGQELTEEEAIEAARNVAIQLMGTIKR
DLGDLDRVKRVVKLLGFVNCVDGFTAQPKVVNGASDLFAEVFQEKGVHAR
SAVGTNALPRNVPVEIEAIIEIEED*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013813	Endoribo_LPSP/chorism_mut-like
IPR035959	RutC-like_sf