mRNA_H-paniculata_contig451.11346.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig451.11346.1 vs. uniprot
Match: A0A7S2SU90_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SU90_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.020e-20 Identity = 38/58 (65.52%), Postives = 47/58 (81.03%), Query Frame = 1
Query: 1 MSKLRFSVCYCSGEEPEYPADELNAHSPHTRGWQSQQFCDYPQELGLAWDAPARVTQV 174
MSKL F+V Y SGE+ +YPA ELN HSPHT GWQS +FCD+PQE+GLA P+R++QV
Sbjct: 1 MSKLSFTVAYSSGEDIDYPARELNVHSPHTVGWQSPRFCDFPQEVGLALSRPSRLSQV 58
BLAST of mRNA_H-paniculata_contig451.11346.1 vs. uniprot
Match: A0A6U4PS30_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A6U4PS30_HEMAN) HSP 1 Score: 87.4 bits (215), Expect = 2.080e-19 Identity = 35/57 (61.40%), Postives = 46/57 (80.70%), Query Frame = 1
Query: 4 SKLRFSVCYCSGEEPEYPADELNAHSPHTRGWQSQQFCDYPQELGLAWDAPARVTQV 174
+KL+F + YCS E+PE+P+ ELNAHSPHT GWQS +FCDYPQELG + A R++Q+
Sbjct: 3 AKLKFKLIYCSSEDPEFPSSELNAHSPHTVGWQSARFCDYPQELGFQFGANVRLSQL 59
BLAST of mRNA_H-paniculata_contig451.11346.1 vs. uniprot
Match: A0A7S0MHU1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MHU1_9CRYP) HSP 1 Score: 84.0 bits (206), Expect = 4.940e-18 Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 1
Query: 4 SKLRFSVCYCSGEEPEYPADELNAHSPHTRGWQSQQFCDYPQELGLAWDAPARVTQV 174
+KLRF + +CS E+PE+PA ELNAHSPHT GWQS +FC+YPQELG + R+ Q+
Sbjct: 3 TKLRFKLVHCSSEDPEFPATELNAHSPHTVGWQSARFCEYPQELGFQFGTTVRLMQL 59
BLAST of mRNA_H-paniculata_contig451.11346.1 vs. uniprot
Match: L1IUT7_GUITC (UVR domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IUT7_GUITC) HSP 1 Score: 82.4 bits (202), Expect = 2.200e-17 Identity = 32/57 (56.14%), Postives = 44/57 (77.19%), Query Frame = 1
Query: 4 SKLRFSVCYCSGEEPEYPADELNAHSPHTRGWQSQQFCDYPQELGLAWDAPARVTQV 174
+KL+F + +CS E+PE+PA ELNAHSPHT GWQS +FCDYPQE+G + + + Q+
Sbjct: 3 AKLKFKLVHCSSEDPEFPATELNAHSPHTVGWQSARFCDYPQEIGFQFSSTVHLMQL 59
BLAST of mRNA_H-paniculata_contig451.11346.1 vs. uniprot
Match: A0A7S0EV58_9CRYP (Hypothetical protein (Fragment) n=3 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0EV58_9CRYP) HSP 1 Score: 83.2 bits (204), Expect = 3.090e-17 Identity = 33/57 (57.89%), Postives = 44/57 (77.19%), Query Frame = 1
Query: 4 SKLRFSVCYCSGEEPEYPADELNAHSPHTRGWQSQQFCDYPQELGLAWDAPARVTQV 174
+KL+F + +CS E+PE+PA ELNAHSPHT GWQS +FCDYPQELG + + + Q+
Sbjct: 9 AKLKFKLVHCSSEDPEFPATELNAHSPHTVGWQSARFCDYPQELGFQFSSTVHLMQL 65
BLAST of mRNA_H-paniculata_contig451.11346.1 vs. uniprot
Match: A0A7S4HB98_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4HB98_GUITH) HSP 1 Score: 82.4 bits (202), Expect = 5.770e-17 Identity = 32/57 (56.14%), Postives = 44/57 (77.19%), Query Frame = 1
Query: 4 SKLRFSVCYCSGEEPEYPADELNAHSPHTRGWQSQQFCDYPQELGLAWDAPARVTQV 174
+KL+F + +CS E+PE+PA ELNAHSPHT GWQS +FCDYPQE+G + + + Q+
Sbjct: 3 AKLKFKLVHCSSEDPEFPATELNAHSPHTVGWQSARFCDYPQEIGFQFSSTVHLMQL 59
BLAST of mRNA_H-paniculata_contig451.11346.1 vs. uniprot
Match: A0A1Y1IAN2_KLENI (Galactose-binding domain-like n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IAN2_KLENI) HSP 1 Score: 82.0 bits (201), Expect = 7.900e-17 Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 1
Query: 7 KLRFSVCYCSGEEPEYPADELNAHSPHTRGWQSQQFCDYPQELGLAWDAPARVTQV 174
KLRF+V SGE+P+YPA ELN HSPHT+GWQS +FC +PQEL L D PA+V Q+
Sbjct: 8 KLRFTVESASGEDPDYPAKELNFHSPHTKGWQSPRFCKFPQELILQLDKPAQVHQI 63
BLAST of mRNA_H-paniculata_contig451.11346.1 vs. uniprot
Match: A0A0L0DIE4_THETB (TOG domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DIE4_THETB) HSP 1 Score: 81.6 bits (200), Expect = 1.080e-16 Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = 1
Query: 4 SKLRFSVCYCSGEEPEYPADELNAHSPHTRGWQSQQFCDYPQELGLAWDAPARVTQV 174
SKL+F+V CSGE+ E+P EL H+PHT+GW+S +FCDYP E+ LA+DAPAR+ ++
Sbjct: 3 SKLKFTVVACSGEDDEHPVVELERHTPHTKGWRSPRFCDYPLEIVLAFDAPARIRKL 59
BLAST of mRNA_H-paniculata_contig451.11346.1 vs. uniprot
Match: A0A2R5GHB4_9STRA (Centrosomal protein of 104 kDa n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GHB4_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 2.440e-15 Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 1
Query: 7 KLRFSVCYCSGEEPEYPADELNAHSPHTRGWQSQQFCDYPQELGLAW 147
+++F V YCSGE+PE+PA ELN HSP T+GWQS FC YPQE+GL +
Sbjct: 47 QVKFEVVYCSGEDPEFPASELNVHSPQTQGWQSPPFCAYPQEIGLGF 93
BLAST of mRNA_H-paniculata_contig451.11346.1 vs. uniprot
Match: A0A5A8C7I5_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C7I5_CAFRO) HSP 1 Score: 75.5 bits (184), Expect = 5.550e-15 Identity = 34/57 (59.65%), Postives = 42/57 (73.68%), Query Frame = 1
Query: 7 KLRFSVCYCSGEEPEYPADELNAHSPHTRGWQSQQFCDYPQELGLAW-DAPARVTQV 174
KLRF V + SG++PEYPA ELN HSP TRGW S QF ++P ELGL + AP R+ Q+
Sbjct: 9 KLRFEVAFVSGQDPEYPASELNVHSPETRGWASPQFSEFPVELGLKFLRAPVRMQQL 65 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig451.11346.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig451.11346.1 >prot_H-paniculata_contig451.11346.1 ID=prot_H-paniculata_contig451.11346.1|Name=mRNA_H-paniculata_contig451.11346.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=58bp MSKLRFSVCYCSGEEPEYPADELNAHSPHTRGWQSQQFCDYPQELGLAWDback to top mRNA from alignment at H-paniculata_contig451:407..772- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig451.11346.1 ID=mRNA_H-paniculata_contig451.11346.1|Name=mRNA_H-paniculata_contig451.11346.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=366bp|location=Sequence derived from alignment at H-paniculata_contig451:407..772- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig451:407..772- >mRNA_H-paniculata_contig451.11346.1 ID=mRNA_H-paniculata_contig451.11346.1|Name=mRNA_H-paniculata_contig451.11346.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=348bp|location=Sequence derived from alignment at H-paniculata_contig451:407..772- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |