mRNA_H-paniculata_contig45055.11337.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig45055.11337.1 vs. uniprot
Match: D8LC12_ECTSI (GBP5, guanylate-binding protein (Divergent) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC12_ECTSI) HSP 1 Score: 128 bits (322), Expect = 5.590e-33 Identity = 63/67 (94.03%), Postives = 64/67 (95.52%), Query Frame = 1
Query: 4 SKTVRVLFADVEGQGDRDVAYDARLASAILPLTKCVIFNWRDSLQVDRMLNLLGVMQRAAHNVDLGE 204
S VRVLFADVEGQGDRD AYDARLASAILPLTKCVIFNWRDSLQVDRMLNLLGVMQRAAHNVDLG+
Sbjct: 88 SNQVRVLFADVEGQGDRDAAYDARLASAILPLTKCVIFNWRDSLQVDRMLNLLGVMQRAAHNVDLGD 154
BLAST of mRNA_H-paniculata_contig45055.11337.1 vs. uniprot
Match: A0A7S3URQ4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URQ4_HETAK) HSP 1 Score: 89.0 bits (219), Expect = 1.140e-20 Identity = 43/66 (65.15%), Postives = 51/66 (77.27%), Query Frame = 1
Query: 4 SKTVRVLFADVEGQGDRDVAYDARLASAILPLTKCVIFNWRDSLQVDRMLNLLGVMQRAAHNVDLG 201
SK ++V F D EGQGDRD YDARL S L ++CV+FNW+DSLQ DR+LNLLGVM RAA NV+ G
Sbjct: 96 SKGMQVGFVDAEGQGDRDAEYDARLVSPALLASRCVLFNWKDSLQRDRILNLLGVMSRAAMNVEKG 161
BLAST of mRNA_H-paniculata_contig45055.11337.1 vs. uniprot
Match: M4B1N2_HYAAE (GBP domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B1N2_HYAAE) HSP 1 Score: 90.5 bits (223), Expect = 1.330e-19 Identity = 41/68 (60.29%), Postives = 52/68 (76.47%), Query Frame = 1
Query: 1 ASKTVRVLFADVEGQGDRDVAYDARLASAILPLTKCVIFNWRDSLQVDRMLNLLGVMQRAAHNVDLGE 204
ASK +R+ F D EGQGDRD+ YD+RL S +L +K VIFNW+DSLQ DRMLNLL V+ RAA ++L +
Sbjct: 129 ASKDIRIGFVDAEGQGDRDITYDSRLVSPVLLASKVVIFNWKDSLQADRMLNLLAVLARAAQGIELAD 196
BLAST of mRNA_H-paniculata_contig45055.11337.1 vs. uniprot
Match: A0A3R6YGE9_9STRA (GBP domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6YGE9_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 2.980e-19 Identity = 40/68 (58.82%), Postives = 51/68 (75.00%), Query Frame = 1
Query: 1 ASKTVRVLFADVEGQGDRDVAYDARLASAILPLTKCVIFNWRDSLQVDRMLNLLGVMQRAAHNVDLGE 204
+S + + F D EGQGDRD+ YD+RL S +L +K VIFNW+DSLQ DRMLNLL V+ +AA NV+L E
Sbjct: 97 SSPNMSIGFVDAEGQGDRDITYDSRLVSPVLLASKVVIFNWKDSLQADRMLNLLAVLAKAAQNVELAE 164
BLAST of mRNA_H-paniculata_contig45055.11337.1 vs. uniprot
Match: A0A835YY61_9STRA (SAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY61_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 4.640e-19 Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 1
Query: 19 VLFADVEGQGDRDVAYDARLASAILPLTKCVIFNWRDSLQVDR------MLNLLGVMQRAAHNV 192
VL ADVEGQGDRDV++DARLAS++LPL KCV+FNW+DSLQVDR MLN L VM+ AA NV
Sbjct: 108 VLLADVEGQGDRDVSHDARLASSVLPLAKCVLFNWKDSLQVDRVLAVDRMLNQLAVMRHAALNV 171
BLAST of mRNA_H-paniculata_contig45055.11337.1 vs. uniprot
Match: D0MZ80_PHYIT (GBP domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=D0MZ80_PHYIT) HSP 1 Score: 88.6 bits (218), Expect = 6.340e-19 Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 1 ASKTVRVLFADVEGQGDRDVAYDARLASAILPLTKCVIFNWRDSLQVDRMLNLLGVMQRAAHNVDL 198
ASK + V F D EGQGDRD+ YD+RL S +L +K VIFNW+DSLQ DRMLNLL V+ RAA ++L
Sbjct: 120 ASKNIHVGFVDAEGQGDRDITYDSRLVSPVLLASKVVIFNWKDSLQADRMLNLLAVLARAAQGIEL 185
BLAST of mRNA_H-paniculata_contig45055.11337.1 vs. uniprot
Match: H3GMX8_PHYRM (GBP domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GMX8_PHYRM) HSP 1 Score: 88.2 bits (217), Expect = 8.650e-19 Identity = 41/68 (60.29%), Postives = 51/68 (75.00%), Query Frame = 1
Query: 1 ASKTVRVLFADVEGQGDRDVAYDARLASAILPLTKCVIFNWRDSLQVDRMLNLLGVMQRAAHNVDLGE 204
AS+ V V F D EGQGDRD+ YD+RL S +L +K VIFNW+DSLQ DRMLNLL V+ RAA ++L +
Sbjct: 120 ASRNVHVGFVDAEGQGDRDITYDSRLVSPVLLSSKVVIFNWKDSLQADRMLNLLAVLARAAQGIELAD 187
BLAST of mRNA_H-paniculata_contig45055.11337.1 vs. uniprot
Match: A0A2P4XDC1_9STRA (Guanylate-binding protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XDC1_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.600e-18 Identity = 40/68 (58.82%), Postives = 51/68 (75.00%), Query Frame = 1
Query: 1 ASKTVRVLFADVEGQGDRDVAYDARLASAILPLTKCVIFNWRDSLQVDRMLNLLGVMQRAAHNVDLGE 204
ASK + V F D EGQGDRD+ YD+RL S +L +K V+FNW+DSLQ DRMLNLL V+ RAA ++L +
Sbjct: 117 ASKGIHVGFVDAEGQGDRDITYDSRLVSPVLLSSKVVLFNWKDSLQADRMLNLLAVLARAAQGIELAD 184
BLAST of mRNA_H-paniculata_contig45055.11337.1 vs. uniprot
Match: A0A418FZ26_9STRA (GBP domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418FZ26_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 2.080e-18 Identity = 40/68 (58.82%), Postives = 51/68 (75.00%), Query Frame = 1
Query: 1 ASKTVRVLFADVEGQGDRDVAYDARLASAILPLTKCVIFNWRDSLQVDRMLNLLGVMQRAAHNVDLGE 204
+S + + F D EGQGDRD+ YD+RL S +L +K VIFNW+DSLQ DRMLNLL V+ +AA NV+L E
Sbjct: 97 SSPNMSIGFVDAEGQGDRDITYDSRLVSPVLLASKVVIFNWKDSLQADRMLNLLAVLAKAAQNVELAE 164
BLAST of mRNA_H-paniculata_contig45055.11337.1 vs. uniprot
Match: A0A3R7Y6U9_9STRA (GBP domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7Y6U9_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 2.180e-18 Identity = 40/68 (58.82%), Postives = 51/68 (75.00%), Query Frame = 1
Query: 1 ASKTVRVLFADVEGQGDRDVAYDARLASAILPLTKCVIFNWRDSLQVDRMLNLLGVMQRAAHNVDLGE 204
+S + + F D EGQGDRD+ YD+RL S +L +K VIFNW+DSLQ DRMLNLL V+ +AA NV+L E
Sbjct: 97 SSPNMSIGFVDAEGQGDRDITYDSRLVSPVLLASKVVIFNWKDSLQADRMLNLLAVLAKAAQNVELAE 164 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45055.11337.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig45055.11337.1 >prot_H-paniculata_contig45055.11337.1 ID=prot_H-paniculata_contig45055.11337.1|Name=mRNA_H-paniculata_contig45055.11337.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=69bp ASKTVRVLFADVEGQGDRDVAYDARLASAILPLTKCVIFNWRDSLQVDRMback to top mRNA from alignment at H-paniculata_contig45055:465..671+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig45055.11337.1 ID=mRNA_H-paniculata_contig45055.11337.1|Name=mRNA_H-paniculata_contig45055.11337.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=207bp|location=Sequence derived from alignment at H-paniculata_contig45055:465..671+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig45055:465..671+ >mRNA_H-paniculata_contig45055.11337.1 ID=mRNA_H-paniculata_contig45055.11337.1|Name=mRNA_H-paniculata_contig45055.11337.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=414bp|location=Sequence derived from alignment at H-paniculata_contig45055:465..671+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |