mRNA_H-paniculata_contig45.11320.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig45.11320.1 vs. uniprot
Match: D8LQ55_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ55_ECTSI) HSP 1 Score: 423 bits (1087), Expect = 1.450e-142 Identity = 226/265 (85.28%), Postives = 246/265 (92.83%), Query Frame = 2
Query: 272 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLASECENLTDAEMWRRDIIRETSKRVHEIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAASAPKSYDADGRELPGGGGYKYFGAAKDLPGVRELFHKSDVENPRRTRKAMYEYITPDYYGYRDEEDGILVAKEAVAEKRKVEEAVAKWKAEKRRREEDGEEQPG-EADDEDVQDVQGXXXXXXXXXXSAQVRAHVPVPSQEKIKEAILKRKKLSLLKRLEGDD 1063
MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFL+SEC+NL DAE+WRRDIIRETSK VH IQNAGAGEHKIRDLNDQINKLLRERTHWDKRI+ELGGPDYAA+APKSYDADGRELPGGGGY YFGAAK LPGVRELFHKSDVENPRRTRK MY++ITPDYYGYRDEEDG+LVAKEAV EKRKV+ AV++W+AEKRRR EDGEE+ G +ADDE XXXXXXXXXXSA+VRAHVPVPSQ+ IKEAILKRKKL+LLKRL+G++
Sbjct: 1 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLSSECDNLQDAELWRRDIIRETSKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRILELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKGLPGVRELFHKSDVENPRRTRKDMYQFITPDYYGYRDEEDGVLVAKEAVMEKRKVQSAVSEWQAEKRRRLEDGEEEAGGDADDEXXXXXXXXXXXXXXXXXSAEVRAHVPVPSQDAIKEAILKRKKLTLLKRLDGEE 265
BLAST of mRNA_H-paniculata_contig45.11320.1 vs. uniprot
Match: W7TA77_9STRA (Pre-mrna-splicing factor isy1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TA77_9STRA) HSP 1 Score: 280 bits (715), Expect = 1.090e-86 Identity = 163/272 (59.93%), Postives = 197/272 (72.43%), Query Frame = 2
Query: 272 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLASECENLTDAEMWRRDIIRETSKRVHEIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAASAPKSYDADGRELPGGGGYKYFGAAKDLPGVRELFHKSDVENPRRTRKAMYEYITPDYYGYRDEEDGILVAKEAVAEKRKVEEAVAKWKAEKRRREEDGEEQPGEADDEDVQDVQGXXXXXXXXXX-------------SAQVRAHVPVPSQEKIKEAILKRKKLSLLKR 1048
MARNEEKAQ M+NKW TMK+ +A ++ RRPFL+S+C L++AE WRR II+E +K+V E+QNAG GEH++RDLNDQINKLLRE+ HW KRI ELGGPDY P++YDADGRELPGGGGY+YFGAAKDLPGV+ELF KS + RRTR MY+ I PDYYGYRDEEDGIL+ KE AEK + AV ++K KR REE GE + E XXXXXXXXXX SA V+AHVPVP QE I A++++KK +LL +
Sbjct: 1 MARNEEKAQAMLNKWLTMKKDLATGDKERRPFLSSDCHVLSEAERWRRQIIKEVTKKVSEVQNAGLGEHRLRDLNDQINKLLREKYHWQKRIKELGGPDYNRIEPRAYDADGRELPGGGGYRYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEEDGILLEKEREAEKEAIAAAVRQFK--KRAREEKGEGEETEXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAAVKAHVPVPCQEDIMTALMEKKKRALLSK 270
BLAST of mRNA_H-paniculata_contig45.11320.1 vs. uniprot
Match: A0A7S2S7Y0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7Y0_9STRA) HSP 1 Score: 271 bits (693), Expect = 3.690e-83 Identity = 153/278 (55.04%), Postives = 188/278 (67.63%), Query Frame = 2
Query: 272 MARNEEKAQMMMNKWTTMKEQMAK---PERGRRPFLASECENLTDAEMWRRDIIRETSKRVHEIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAASAPKSYDADGRELPGGGGYKYFGAAKDLPGVRELFHKSDVENPRRTRKAMYEYITPDYYGYRDEEDGILVAKEAVAEKRKVEEAVAKWKAEKRRREE----DGEEQPGEADDEDVQDVQ-----------GXXXXXXXXXXSAQVRAHVPVPSQEKIKEAILKRKKLSLLKRL 1051
MARNEEKA ++NKW TMK + AK P+R RP+LA+EC++L AE WR D+I+E SK + EIQNAG GEH+IRDLNDQINKLLRE+ HW KRI ELGGPDY A P+S+DADGRELPGGGGYKYFGAAK+LPGVRELF + PRRTR +Y+ ITPDYYGYRDE+D L+ KEA+AEK +EEA A+ + KR+R +GE D G S +AHVPVPSQ+++K+AIL +K LL++L
Sbjct: 1 MARNEEKAMSLLNKWVTMKSEFAKGGGPQR--RPYLATECDDLRQAERWRLDVIKEVSKGIGEIQNAGLGEHRIRDLNDQINKLLREKFHWQKRIRELGGPDYNAIEPRSFDADGRELPGGGGYKYFGAAKELPGVRELFQAEAPQRPRRTRAQIYKTITPDYYGYRDEDDEDLLRKEALAEKEAIEEADAQHQRLKRQRXXXXXXNGEXXXXXXXXXXXXDDAAAMAAAAHSNFGEAMARASAASSTVAKAHVPVPSQDEVKQAILDHRKQQLLQQL 276
BLAST of mRNA_H-paniculata_contig45.11320.1 vs. uniprot
Match: A0A8K0KFN5_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0KFN5_LADFU) HSP 1 Score: 247 bits (631), Expect = 7.420e-74 Identity = 138/292 (47.26%), Postives = 187/292 (64.04%), Query Frame = 2
Query: 272 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLASECENLTDAEMWRRDIIRETSKRVHEIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAASAPKSYDADGRELPGGGGYKYFGAAKDLPGVRELFHKSDVENPRRTRKAMYEYITPDYYGYRDEEDGILVAKEAVAEKRKVEEAVAKWKAEKRRREEDGEEQPGEADDEDV------------QDVQGXXXXXXXXXXSAQVRA----HVPVPSQEKIKEAILKRKKLSLLKRLEGDDVSE*FGRFRSVI 1099
MARN EKA + +W + Q E+ RRP+LASEC +L AE WR IIRE +K+V +IQNAG GE +IRDLND+INKLLRE+ HW+ +I ELGGPDYA P+ D +G+E+PG GYKYFGAAKDLPGVRELF + PR+TR + + I DYYGYRD++DGIL+ E AE++ + EA+A WKA+K +DG E+ E ++E++ D + S Q RA HVPVPSQ++++ A+L+R+K LL+R DD+ G +S++
Sbjct: 1 MARNAEKAMTTLARWRAAQIQDQGKEKERRPYLASECLDLAKAEKWRMQIIREIAKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEAQIRELGGPDYAKIGPRMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEQEPPLPPRKTRAELMKDIDADYYGYRDDDDGILIPMEQEAERKAIAEAIAVWKAKKEALLQDGVEEVPEEEEENIYAVDAEGYSDEGSDEEAVGADGDSSTISQQHRARFMAHVPVPSQKEVEAALLQRRKQELLERYASDDLVRQEGESKSLL 292
BLAST of mRNA_H-paniculata_contig45.11320.1 vs. uniprot
Match: A0A8K1CPD6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPD6_PYTOL) HSP 1 Score: 243 bits (621), Expect = 1.300e-73 Identity = 117/197 (59.39%), Postives = 150/197 (76.14%), Query Frame = 2
Query: 272 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLASECENLTDAEMWRRDIIRETSKRVHEIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAASAPKSYDADGRELPGGGGYKYFGAAKDLPGVRELFHKSDVENPRRTRKAMYEYITPDYYGYRDEEDGILVAKEAVAEKRKVEEAVAKW-KAEKRR 859
MARNEEKAQ ++N+WT+MK+ + + RRP+LASEC+NL DAE WRR II+E SK+V +IQNAG GEH IRDLND+INK +RE+ HW+KRI+EL G DY S P +YDADG + GGGGYKYFGAAK+LPGVRELF K + P+R R+ MY++I PDYYG R+++D ++ E AE R ++A+ W KAEK R
Sbjct: 1 MARNEEKAQSLLNRWTSMKQDFSDTFKNRRPYLASECDNLKDAERWRRQIIKEISKKVADIQNAGLGEHVIRDLNDEINKRIREKYHWEKRIIELNGSDYTRSQPSAYDADGTVVQGGGGYKYFGAAKNLPGVRELFEKEALPEPKRVREEMYKHIEPDYYGLREDDDAAMLEAEQAAETRLRKDAMEAWDKAEKER 197
BLAST of mRNA_H-paniculata_contig45.11320.1 vs. uniprot
Match: UPI0003597C0E (pre-mRNA-splicing factor ISY1 homolog n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI0003597C0E) HSP 1 Score: 246 bits (628), Expect = 1.760e-73 Identity = 140/284 (49.30%), Postives = 184/284 (64.79%), Query Frame = 2
Query: 272 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLASECENLTDAEMWRRDIIRETSKRVHEIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAASAPKSYDADGRELPGGGGYKYFGAAKDLPGVRELFHKSDVENPRRTRKAMYEYITPDYYGYRDEEDGILVAKEAVAEKRKVEEAVAKWKAEKRRREEDGEEQPGEA---------------DDEDVQDVQGXXXXXXXXXXSAQVR--AHVPVPSQEKIKEAILKRKKLSLLKRLEGDDVSE 1072
MARN EKA + +W + K E+ RRP+LAS+C+NL +AE WRR II E S++V +IQNAG GE K+RDLND+INKLLRE+ HW+ RI+ELGGPDY + PK D+DG+E+PG GYKYFGAAKDLPGVRELF + PR+TR + + I DYYGYRDE+DGI+V +E AE++ + V +WK EK+ + + GE EA DD +VQ+V+ R AHVPVPSQ++I+ A+L RKK+ LL+R D + E
Sbjct: 1 MARNSEKAMTTLARWRASQVGEIK-EKDRRPYLASDCDNLHEAEKWRRQIIGEISRKVAQIQNAGLGEFKLRDLNDEINKLLREKGHWEDRILELGGPDYRKTGPKMLDSDGKEVPGNKGYKYFGAAKDLPGVRELFEQEPPPPPRKTRAELMKDIDADYYGYRDEDDGIIVPQELEAERKAISSKVREWK-EKQNKVKSGEMTEEEATGKEEELFTAAELAEDDLEVQEVEMEPTESTSDLDLDNQRFIAHVPVPSQKEIEAALLMRKKMELLQRYVSDGLQE 282
BLAST of mRNA_H-paniculata_contig45.11320.1 vs. uniprot
Match: D0NZZ7_PHYIT (Pre-mRNA-splicing factor ISY1 n=19 Tax=Phytophthora TaxID=4783 RepID=D0NZZ7_PHYIT) HSP 1 Score: 242 bits (617), Expect = 5.070e-73 Identity = 116/192 (60.42%), Postives = 148/192 (77.08%), Query Frame = 2
Query: 272 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLASECENLTDAEMWRRDIIRETSKRVHEIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAASAPKSYDADGRELPGGGGYKYFGAAKDLPGVRELFHKSDVENPRRTRKAMYEYITPDYYGYRDEEDGILVAKEAVAEKRKVEEAVAKWKA 847
MARNEEKAQ ++N+WT+MK+ A + RRP+LAS+C+ L DAE WRR IIRE SK+V +IQNAG+ EH IRDLND+INK +RE+ HW++RI +LGGPDY+ S P+SYDADG + GGYKYFGAAK+LPGVRELF K DVE +RTR+ MY++I PDYYG+RD++D + E AEKR + A+ W A
Sbjct: 1 MARNEEKAQSLLNRWTSMKQDFADTFKNRRPYLASQCDTLKDAERWRRQIIREISKKVADIQNAGSSEHVIRDLNDEINKRIREKRHWERRIAQLGGPDYSKSQPQSYDADGTPVSSVGGYKYFGAAKNLPGVRELFQKEDVEPRKRTRQHMYKHIKPDYYGFRDDDDEQQLKDEDEAEKRLRQRAMDGWDA 192
BLAST of mRNA_H-paniculata_contig45.11320.1 vs. uniprot
Match: A0A6P4ZB62_BRABE (pre-mRNA-splicing factor ISY1 homolog n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZB62_BRABE) HSP 1 Score: 244 bits (623), Expect = 6.190e-73 Identity = 144/274 (52.55%), Postives = 184/274 (67.15%), Query Frame = 2
Query: 272 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLASECENLTDAEMWRRDIIRETSKRVHEIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAASAPKSYDADGRELPGGGGYKYFGAAKDLPGVRELFHKSDVENPRRTRKAMYEYITPDYYGYRDEEDGILVAKEAVAEKRKVEEAVAKWKAEKRRREEDGEEQPGEADDEDVQDVQGXXXXXXXXXXSAQVR-------AHVPVPSQEKIKEAILKRKKLSLLKRLEGDDVSE 1072
MARN EKA + +W M+ K + RRPFLASE +L AE WR IIRE +K+V +IQNAG GE +IRDLND+INKLLRE+ HW++RI ELGGPDY PK D +G+E+PG GYKYFGAAKDLPGVRELF + PRRTR +Y+ + DYYGYRDE+DG+LV E EK V EAVA+WK++K E G + E ++ED+ V XXXXXX + AHVPVPSQ++++EA+L+RKK+ LL++ D + E
Sbjct: 1 MARNAEKAMTTLARWRNMQMDQGKVKE-RRPFLASEENDLGKAEKWRHQIIREVAKKVSQIQNAGLGEFRIRDLNDEINKLLREKKHWEERIKELGGPDYERVGPKMLDQEGKEVPGNRGYKYFGAAKDLPGVRELFEQEPPAPPRRTRAELYKEVDADYYGYRDEDDGVLVPLEQDLEKEVVAEAVAEWKSQK----EAGLLKDVE-EEEDIYAVXXXXXXXXTGESKMETEEGQQQFIAHVPVPSQKEVEEALLRRKKMELLQKYASDSLLE 268
BLAST of mRNA_H-paniculata_contig45.11320.1 vs. uniprot
Match: A0A2C9JS12_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JS12_BIOGL) HSP 1 Score: 244 bits (623), Expect = 9.640e-73 Identity = 137/284 (48.24%), Postives = 184/284 (64.79%), Query Frame = 2
Query: 272 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLASECENLTDAEMWRRDIIRETSKRVHEIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAASAPKSYDADGRELPGGGGYKYFGAAKDLPGVRELFHKSDVENPRRTRKAMYEYITPDYYGYRDEEDGILVAKEAVAEKRKVEEAVAKWKAEKRRREEDGE----------------EQPGEADDEDVQDVQGXXXXXXXXXXSAQ-VRAHVPVPSQEKIKEAILKRKKLSLLKRLEGDDVSE 1072
MARN EKA + +W + K E+ RRP+LAS+C+NL +AE WRR II E S++V +IQNAG GE K+RDLND+INKLLRE+ HW+ RIVEL GPDY + PK D+DG+E+PG GYKYFGAAKDLPGVRELF + PR+TR + + I DYYGYRDE+DGI++ EA EK+ ++ V +WK EK+ + + GE E E DDE+ + ++ Q AHVPVPSQ++I++A+L RKK+ L++R D++ E
Sbjct: 1 MARNSEKAMTTLARWRASQVGGIK-EKERRPYLASDCDNLQEAEKWRRQIIGEISRKVAQIQNAGLGEFKLRDLNDEINKLLREKGHWEDRIVELNGPDYKKTGPKMLDSDGKEVPGNKGYKYFGAAKDLPGVRELFDQEPAPAPRKTRAELMKDIDADYYGYRDEDDGIIIPLEAEVEKQVIKTKVQEWK-EKQNKVQTGEMTHEEAHGAEEELFSKEALAEKDDEEDESLKPSTSKDFYREFDKQHFIAHVPVPSQKEIEQALLHRKKMELIQRYASDNLQE 282
BLAST of mRNA_H-paniculata_contig45.11320.1 vs. uniprot
Match: A0A6A4WR75_AMPAM (Pre-mRNA-splicing factor ISY1 n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4WR75_AMPAM) HSP 1 Score: 244 bits (623), Expect = 1.030e-72 Identity = 138/278 (49.64%), Postives = 178/278 (64.03%), Query Frame = 2
Query: 272 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLASECENLTDAEMWRRDIIRETSKRVHEIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAASAPKSYDADGRELPGGGGYKYFGAAKDLPGVRELFHKSDVENPRRTRKAMYEYITPDYYGYRDEEDGILVAKEAVAEKRKVEEAVAKWKAEKRRREEDG-----------EEQPGEADDEDVQDVQGXXXXXXXXXXSAQVRAHVPVPSQEKIKEAILKRKKLSLLKRLEGDDVSE 1072
MARN EKA + +W + A PER RRP+LASEC+ L DAE WR I+RE +++V +IQNAG GE +IRDLND+INKLLRE+ HW+ RI ELGGPDYA + PK D +GRE+PG GY+YFGAA+DLPGVRELF + PR+TR + + I DYYG+ D+EDG+LV +E E+ AVA W A+ RRR+E G EE P +ADD D + A+ AHVPVPSQ +++ A+++RKK LL R D + E
Sbjct: 1 MARNAEKAMTTLARWRQAHSEDA-PERARRPYLASECDQLPDAERWRNQIVREVARKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEARIKELGGPDYARTGPKMLDREGREVPGNRGYRYFGAARDLPGVRELFEQEPPPPPRKTRAELMKDIDADYYGFLDDEDGVLVPRERQQERL----AVAAWLADWRRRKEAGLLGDDADPAEVEEAPLDADDSDEE-------AERHASAPARFVAHVPVPSQREVEAALVERKKRELLARYASDALRE 266 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45.11320.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig45.11320.1 >prot_H-paniculata_contig45.11320.1 ID=prot_H-paniculata_contig45.11320.1|Name=mRNA_H-paniculata_contig45.11320.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=268bp MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLASECENLTDAEMWRRDIback to top mRNA from alignment at H-paniculata_contig45:19892..24732- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig45.11320.1 ID=mRNA_H-paniculata_contig45.11320.1|Name=mRNA_H-paniculata_contig45.11320.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4841bp|location=Sequence derived from alignment at H-paniculata_contig45:19892..24732- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig45:19892..24732- >mRNA_H-paniculata_contig45.11320.1 ID=mRNA_H-paniculata_contig45.11320.1|Name=mRNA_H-paniculata_contig45.11320.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1608bp|location=Sequence derived from alignment at H-paniculata_contig45:19892..24732- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |