mRNA_H-paniculata_contig4495.11312.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4495.11312.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE) HSP 1 Score: 84.7 bits (208), Expect = 1.100e-15 Identity = 43/76 (56.58%), Postives = 57/76 (75.00%), Query Frame = 1
Query: 19 QCNASRLDSVTV*SLGIGSSEKTCKNPEM-KVMKKLVACVDVFNHSAVNNNEAKDIQMMHEEFHVVCELIGQKVTR 243
+CNA RL+SVT+ +LGI S +T +NP M K+MK+L A V VF+HSAVNN+E KDIQ + EEF ++ ELI + TR
Sbjct: 46 KCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTR 121
BLAST of mRNA_H-paniculata_contig4495.11312.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 84.7 bits (208), Expect = 1.290e-15 Identity = 43/76 (56.58%), Postives = 57/76 (75.00%), Query Frame = 1
Query: 19 QCNASRLDSVTV*SLGIGSSEKTCKNPEM-KVMKKLVACVDVFNHSAVNNNEAKDIQMMHEEFHVVCELIGQKVTR 243
+CNA RL+SVT+ +LGI S +T +NP M K+MK+L A V VF+HSAVNN+E KDIQ + EEF ++ ELI + TR
Sbjct: 374 KCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTR 449
BLAST of mRNA_H-paniculata_contig4495.11312.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 1.700e-11 Identity = 45/102 (44.12%), Postives = 62/102 (60.78%), Query Frame = 2
Query: 266 ILKNDKMRAGEQKTMLRLPQLKIAIIVHFSNHPTSKWMLIMSEWLVTSEVCSLLDTISEVTTRIQGSLNTHISQMTFIMIKMVEVLKLDNHLIRTSAVQNTT 571
I +ND + K M RL LK I +F P + L EW +T+EVCSLL +SEVT R+QG+ +THISQ FI+ +++E+L+ D+H IR QN T
Sbjct: 451 IRRNDTRWTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEWTITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRA---QNAT 549
BLAST of mRNA_H-paniculata_contig4495.11312.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 71.6 bits (174), Expect = 4.250e-11 Identity = 39/94 (41.49%), Postives = 60/94 (63.83%), Query Frame = 2
Query: 266 ILKNDKMRAGEQKTMLRLPQLKIAIIVHFSNHPTSKWMLIMSEWLVTSEVCSLLDTISEVTTRIQGSLNTHISQMTFIMIKMVEVLKLDNHLIR 547
+ +ND + K M R+ LK I +F +P ++ L +EW +T+EVCSLL +SEVT R+QGS++TH+ Q FI+ +++E+L D H IR
Sbjct: 453 LRRNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIR 546
BLAST of mRNA_H-paniculata_contig4495.11312.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 7.380e-11 Identity = 45/104 (43.27%), Postives = 63/104 (60.58%), Query Frame = 2
Query: 266 ILKNDKMRAGEQKTMLRLPQLKIAIIVHF-------SNHPTSKWMLIMSEWLVTSEVCSLLDTISEVTTRIQGSLNTHISQMTFIMIKMVEVLKLDNHLIRTSA 556
I +ND +QK M RL LK I +F S + K L EW VT+EVCSLL+T+SEVT R+QG+ +TH+SQ TFI+ +++++L D H IR +
Sbjct: 260 IRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATDTHLSQATFIINEVIDMLTTDYHPIRVES 363
BLAST of mRNA_H-paniculata_contig4495.11312.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 7.400e-11 Identity = 39/91 (42.86%), Postives = 58/91 (63.74%), Query Frame = 2
Query: 275 NDKMRAGEQKTMLRLPQLKIAIIVHFSNHPTSKWMLIMSEWLVTSEVCSLLDTISEVTTRIQGSLNTHISQMTFIMIKMVEVLKLDNHLIR 547
ND + K M R+ LK I +F +P ++ L +EW +T+EVCSLL +SEVT R+QGS++TH+ Q FI+ +++E+L D H IR
Sbjct: 261 NDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIR 351
BLAST of mRNA_H-paniculata_contig4495.11312.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 69.3 bits (168), Expect = 2.380e-10 Identity = 43/89 (48.31%), Postives = 57/89 (64.04%), Query Frame = 2
Query: 302 KTMLRLPQLKIAIIVHFSN-------HPTSKWMLIMSEWLVTSEVCSLLDTISEVTTRIQGSLNTHISQMTFIMIKMVEVLKLDNHLIR 547
+ M+RL L AI +F H K L EW VT+EVCSLLDT+SE T R+QG+ +THISQ TFI+ +++E+LK D+H IR
Sbjct: 265 RMMVRLLILNKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMEMLKEDSHPIR 353
BLAST of mRNA_H-paniculata_contig4495.11312.1 vs. uniprot
Match: A0A6H5KZZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZZ1_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 7.470e-9 Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 2
Query: 266 ILKNDKMRAGEQKTMLRLPQLKIAIIVHFSNHPTSKWMLIMSEWLVTSEVCSLLDTISEVTTRIQGSLNTHISQMTFIMIKMVEVLKLDNHLIR 547
+ +ND + K M R LK I +F + ++ L +EW + +EVCSLL +SEVT R+QGS++THI Q FI+ +++E+L D H IR
Sbjct: 42 LRRNDTRWTSQFKMMDRCLALKKPISEYFKKYLQNERKLTPNEWTMINEVCSLLSNVSEVTIRMQGSVDTHIGQAMFIIHELIEMLGEDTHPIR 135
BLAST of mRNA_H-paniculata_contig4495.11312.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 1.150e-8 Identity = 34/76 (44.74%), Postives = 50/76 (65.79%), Query Frame = 1
Query: 19 QCNASRLDSVTV*SLGIGSSEKTCKNPEM-KVMKKLVACVDVFNHSAVNNNEAKDIQMMHEEFHVVCELIGQKVTR 243
+CN R+++ V +LGI + + KNP M +MKKL A V VF+HSAVNN+E K++Q + E F + EL+ + TR
Sbjct: 35 ECNCHRVNTAVVWALGIAAKGR--KNPTMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTR 108
BLAST of mRNA_H-paniculata_contig4495.11312.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 63.5 bits (153), Expect = 2.270e-8 Identity = 41/90 (45.56%), Postives = 56/90 (62.22%), Query Frame = 2
Query: 302 KTMLRLPQLKIAIIVHFSNHPTS------KWMLIMSEWLVTSEVCSLLDTISEVTTRIQGSLNTHISQMTFIMIKMVEVLKLDNHLIRTS 553
K M RL LK I +F P K L EW+VT+EVCSLL +SE+T RIQG+ +THISQ F++ +++E+LK + H IRT+
Sbjct: 127 KMMGRLLTLKKPISEYFRRLPQIPSNKQLKRKLSSHEWIVTNEVCSLLGDVSEITIRIQGAQDTHISQAMFLIHEVMEMLKDETHPIRTA 216 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4495.11312.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4495.11312.1 >prot_H-paniculata_contig4495.11312.1 ID=prot_H-paniculata_contig4495.11312.1|Name=mRNA_H-paniculata_contig4495.11312.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp MSFVAYILKNDKMRAGEQKTMLRLPQLKIAIIVHFSNHPTSKWMLIMSEWback to top mRNA from alignment at H-paniculata_contig4495:3476..4530- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4495.11312.1 ID=mRNA_H-paniculata_contig4495.11312.1|Name=mRNA_H-paniculata_contig4495.11312.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1055bp|location=Sequence derived from alignment at H-paniculata_contig4495:3476..4530- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4495:3476..4530- >mRNA_H-paniculata_contig4495.11312.1 ID=mRNA_H-paniculata_contig4495.11312.1|Name=mRNA_H-paniculata_contig4495.11312.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=660bp|location=Sequence derived from alignment at H-paniculata_contig4495:3476..4530- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |