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Homology
BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: D7G5N8_ECTSI (Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5N8_ECTSI) HSP 1 Score: 209 bits (533), Expect = 3.000e-58 Identity = 148/305 (48.52%), Postives = 178/305 (58.36%), Query Frame = 3
Query: 210 LSCCSVLLACGLCGAFLPPPAALGPTLNRNHRVVVSLSDLLQRGVRSRTAGTSTNNIACRMQQ-EGGNNELQLAVKTLAAQVQDLTTMVKQLADDTTTATGGASQIINGAAVENNAAVPVAPSTAPAGKGMKAGPTELVSISAAQQRIDAWLNEQGFHVATVDAPQQPPVAVVAPVTAAAAAPVEVXXXXXXXXXXXPAEETPE-----GAGYKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDELP 1106
L+ L CGLCGAF+PP A RMQQ G + ELQ+AV LA QV++LT MV QLA + GA++ ING V+ +A+PV + A K G T LVS SAAQQRID WL E G A+ PVA XXXXXXXXXXX G+GYK+KIEW+GAIHEV CDAETT+L+AAM+AG+ELP SCMSGSCLTCP K+ SG VDQSEGVLE+EQ DAG++LTC+SYP SDV FAV++E++LP
Sbjct: 11 LTLACALAWCGLCGAFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS------AVRMQQGSGSDQELQVAVSKLAGQVEELTAMVAQLAAEPG-GNAGAAKAINGGVVDGGSALPVVSTKA------KGGSTPLVSTSAAQQRIDQWLRESGGEAASA------PVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGYKVKIEWEGAIHEVNCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKIVSGSVDQSEGVLEDEQKDAGFLLTCISYPESDVHFAVVDEEDLP 296
BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: A0A835YL41_9STRA (Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL41_9STRA) HSP 1 Score: 162 bits (410), Expect = 7.370e-42 Identity = 111/232 (47.84%), Postives = 136/232 (58.62%), Query Frame = 3
Query: 414 ELQLAVKTLAAQVQDLTTMVKQLA-DDTTTATGGASQIINGAAVENNAAVPVAPSTAPAGKGMKAGPTE-LVSISAAQQRIDAWLNEQGFHVATVDAPQQPPVAVVAPVTAAAAAPVEVXXXXXXXXXXXPAEETPEGAGYKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 1103
EL AV+ L AQV LT +VK++A + A + INGAAV A P + AG A P E LV +SAA+ RI ++L QG AA P XXXX E P G GY + I+WDGA H V CD ETTVL+AAM+AG++LPHSCMSGSCLTCP +L +G+V+Q +GVLE++Q AG MLTCVSYPLSD+ F VI EDEL
Sbjct: 11 ELVKAVEALQAQVTQLTALVKEMAASEANGAAAAPAAKINGAAVPLKA--PTLQTGLIAGTVASAPPGEILVPVSAAEARIQSFLASQGKAAPXXXXXXXXXXXXXXXXXXXAAVPAAXXXXXP---------EAPPGDGYVVTIDWDGATHVVRCDGETTVLEAAMDAGLDLPHSCMSGSCLTCPGRLSAGRVEQGDGVLEDDQIAAGLMLTCVSYPLSDLRFEVIGEDEL 231
BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: A0A5N6MZ86_9ASTR (Ferredoxin n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MZ86_9ASTR) HSP 1 Score: 108 bits (269), Expect = 9.730e-24 Identity = 49/92 (53.26%), Postives = 64/92 (69.57%), Query Frame = 3
Query: 828 YKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 1103
YK+ IE DG E+ D + T+L+ A+EAG+ +PH C G C+TCPAKL SG VDQSEG+L E+ + GY L CVSYP SD + +I E+EL
Sbjct: 50 YKVAIEHDGQTTELEVDPDETILEKALEAGLAVPHDCKLGVCMTCPAKLLSGSVDQSEGMLSEDVIERGYSLLCVSYPKSDCQVKIIPEEEL 141
BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: A0A830CLQ9_9LAMI (Ferredoxin n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830CLQ9_9LAMI) HSP 1 Score: 107 bits (266), Expect = 2.610e-23 Identity = 47/98 (47.96%), Postives = 66/98 (67.35%), Query Frame = 3
Query: 810 TPEGAGYKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 1103
TP YK+ IE DG E+ + + T+L A++AG+++PH C G C+TCPA+L +GKVDQSEG+L ++ + GY LTC SYP SD +I E+EL
Sbjct: 46 TPSVHAYKVVIEHDGVATELEVEPDETILSKALDAGLDVPHDCKLGVCMTCPAQLVAGKVDQSEGMLSDDVVERGYALTCASYPRSDCRIKIIPEEEL 143
BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: UPI001CB96E6F (ferredoxin C 1, chloroplastic-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB96E6F) HSP 1 Score: 106 bits (265), Expect = 3.760e-23 Identity = 50/98 (51.02%), Postives = 64/98 (65.31%), Query Frame = 3
Query: 810 TPEGAGYKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 1103
T + YKI IE DG EV D + T+L+ A+E G+ +PH C G C+TCPAKL SG VDQSEG+L ++ + GY L CVSYP SD +I E+EL
Sbjct: 48 TTQKCNYKISIEHDGETTEVEVDPDETILEKALETGMSVPHDCKLGVCMTCPAKLISGNVDQSEGMLSDDVIERGYSLLCVSYPKSDCVVKIIPEEEL 145
BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: A0A7J7LHT5_9MAGN (Ferredoxin n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7LHT5_9MAGN) HSP 1 Score: 104 bits (259), Expect = 1.580e-22 Identity = 46/92 (50.00%), Postives = 63/92 (68.48%), Query Frame = 3
Query: 828 YKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 1103
YK+ IE +G+I E+ D + T+L+ A++ G+ +PH C G C+TCPAKL SG VDQSEG+L ++ D GY L CV+YP SD I E+EL
Sbjct: 39 YKVVIEHEGSIKELEVDEDETILNKALDIGLSVPHDCKLGVCMTCPAKLMSGSVDQSEGMLSDDVVDNGYALLCVAYPRSDCHIRTIPEEEL 130
BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: UPI001CB9638D (ferredoxin C 1, chloroplastic-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9638D) HSP 1 Score: 104 bits (260), Expect = 1.670e-22 Identity = 48/98 (48.98%), Postives = 64/98 (65.31%), Query Frame = 3
Query: 810 TPEGAGYKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 1103
T + YKI IE DG E+ D + T+L+ A+E G+ +PH C G C+TCPAK+ SG VDQSEG+L ++ + GY L CVSYP SD +I E+EL
Sbjct: 46 TTQKCHYKISIEHDGQATEIEVDPDETILEKALETGMSVPHDCKLGVCMTCPAKMISGNVDQSEGMLSDDVIERGYSLLCVSYPKSDCVVKIIPEEEL 143
BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: A0A6P5SE90_PRUAV (Ferredoxin n=7 Tax=Prunus TaxID=3754 RepID=A0A6P5SE90_PRUAV) HSP 1 Score: 104 bits (259), Expect = 1.930e-22 Identity = 45/92 (48.91%), Postives = 64/92 (69.57%), Query Frame = 3
Query: 828 YKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 1103
YK+ +E +G E+ +A+ T+L+ A+E+G+ +PH C G C+TCPA+L SGKVDQ+EG+L ++ + GY L CVSYP SD I EDEL
Sbjct: 46 YKVVVEHEGLSTELEVEADETILEKALESGLSVPHDCKLGVCMTCPARLLSGKVDQNEGMLSDDVVEGGYTLLCVSYPQSDCHIKTIPEDEL 137
BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: UPI0010A2FF49 (ferredoxin C 1, chloroplastic n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A2FF49) HSP 1 Score: 104 bits (259), Expect = 1.930e-22 Identity = 46/92 (50.00%), Postives = 61/92 (66.30%), Query Frame = 3
Query: 828 YKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 1103
YK+ IE G + E+ D E T+L A+++G+E+PH C G C+TCPA+L SG VDQSEG+L ++ + GY L C SYP SD I EDEL
Sbjct: 46 YKVVIEHQGELRELEIDPEETILSKALDSGLEVPHDCKLGVCMTCPARLLSGSVDQSEGMLSDDVVERGYALLCASYPRSDCHIRTIPEDEL 137
BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: D8RAV5_SELML (Ferredoxin (Fragment) n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RAV5_SELML) HSP 1 Score: 102 bits (254), Expect = 2.610e-22 Identity = 43/92 (46.74%), Postives = 63/92 (68.48%), Query Frame = 3
Query: 828 YKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 1103
+++++E +G IH + + T+L A+E G+E+PH C G C+TCPAKL+ G+V+QSEG+L ++ D GY L CV+YPL D I EDEL
Sbjct: 3 FEVEMEHEGKIHTLRVPEDETILSKALEEGVEVPHDCKLGVCMTCPAKLERGRVNQSEGMLSDDVVDKGYALLCVAYPLEDCRIRTIPEDEL 94
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Viridiplantae |
| Seed ortholog score | 105.1 |
| Seed ortholog evalue | 6.1e-20 |
| Seed eggNOG ortholog | 102107.XP_008224313.1 |
| KEGG ko | ko:K02639 |
| KEGG Pathway | ko00195,map00195 |
| Hectar predicted targeting category | chloroplast |
| GOs | GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009314,GO:0009416,GO:0009507,GO:0009536,GO:0009628,GO:0009642,GO:0009644,GO:0009987,GO:0016491,GO:0022900,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050896,GO:0051536,GO:0051537,GO:0051540,GO:0055114 |
| EggNOG free text desc. | Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions |
| EggNOG OGs | 2RZRG@2759,37VRI@33090,3GITD@35493,4JTZ2@91835,COG0633@1 |
| Ec32 ortholog description | 2Fe-2S ferredoxin-type domain |
| Ec32 ortholog | Ec-12_008550.1 |
| COG Functional cat. | C |
| Best tax level | fabids |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00194 |
| Exons | 4 |
| Model size | 2309 |
| Cds size | 978 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4464.11258.1 >prot_H-paniculata_contig4464.11258.1 ID=prot_H-paniculata_contig4464.11258.1|Name=mRNA_H-paniculata_contig4464.11258.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=326bp
MAKTCAKSSTTSVRMNATATLTRRRWLSCCSVLLACGLCGAFLPPPAALG
PTLNRNHRVVVSLSDLLQRGVRSRTAGTSTNNIACRMQQEGGNNELQLAV
KTLAAQVQDLTTMVKQLADDTTTATGGASQIINGAAVENNAAVPVAPSTA
PAGKGMKAGPTELVSISAAQQRIDAWLNEQGFHVATVDAPQQPPVAVVAP
VTAAAAAPVEVAPVEVAPMATPPAEETPEGAGYKIKIEWDGAIHEVTCDA
ETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDA
GYMLTCVSYPLSDVEFAVIEEDELP* back to topmRNA from alignment at H-paniculata_contig4464:3533..12697+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4464.11258.1 ID=mRNA_H-paniculata_contig4464.11258.1|Name=mRNA_H-paniculata_contig4464.11258.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9165bp|location=Sequence derived from alignment at H-paniculata_contig4464:3533..12697+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGATTACGCCCCGCGGAGAGACCGAGCATACGTCCCACCACAGAGGGAAG
AGGCCATCTTGTGCCGCCTCCCAGCAAAATTTGCATAAATTAGGTCTTTG
AAACTCCCCAAGGCACTCGTTAGTGCTCAAAATGGCCAAGACTTGTGCGA
AGTCCAGCACCACAAGTGTCCGAATGAACGCTACTGCTACTTTGACAAGG
AGGAGGTGGCTGAGTTGTTGCTCGGTTTTGCTAGCCTGCGGGTTGTGCGG
AGCTTTTCTCCCGCCCCCCGCCGCGCTTGGTCCCACACTTAACCGCAACC
ACCGCGTCGTTGTTTCTCTGTCGGATCTTCTGCAGCGCGGCGTGCGATCA
CGTACTGCTGGGACTAGTACTAACAACATAGCGTGCCGCATGCAGCAAGA
GGGTGGAAACAATGAATTACAGCTCGCTGTGAAGACGTTGGCTGCACAGG
TCCAGGACTTGACAACGATGGTCAAGCAACTGGCGGATGATACTACCACG
GCTACGGGCGGGGCGTCGCAGATCATCAATGGGGCTGCCGTTGAAAACAA
TGCGGCGGTGCCTGTTGCACCATCGACTGCGCCCGCGGGGAAGGGGATGA
AGGCGGGACCGACGGAGCTTGTCAGGTGACATATCTTGGATATTGGATAA
CCGTTATCTGGTACCATGTACGATAATACATAAAAACTCCGGTGTGGTAA
CGAGTCGGTAAAGCCGGTCGTCGAAGTGGAGGAAAGGTGGGCCAATAACA
GCCAGCTGTTGTTCTATGCACTACTCGCCCTATTGTGATGATGTCGGGAT
TTTGCAGTGGGTATGTCGGGGGAAGTGTTGATTGAATTCTGTGGGCCCGG
GCTGCTGCAGCGATTTTGGGAGAATTGTTGGCGAGGTTAACAAATGAGCA
TCGAAGTGCTGTCTGGAAGCACCCAGAAGACAGAGTTCAACACGATGCAC
GAAACTCTAGGCGCCTCAGATATCGTTCGATCGCGTTGCAGTTTGAAGGT
TTGCTTGCTGCACACATAGCCAGGGTCAATATATTGTGTCTGGGCGCTGC
TATTGTTGAGCACATCGTTACGGGTGCGCCTCGCTACGCACACCTCCTGC
TTCCTATCCCTCCGATTCGTCCAGCGCATAACAAGTCACTATATACCCGC
AATCCACCCGCCCCCGATTCGAAATATCCCGGACAGCCCTCGATGGCGGT
CCCCCGCATAAACTATCGTGTGTCGTCTGCCAGGGTCTGTCTCCCTAAAA
AATATGCCCTCTAGTGTTATCGACCAATATCGTTGCAGTAATCGAGACGT
TGGGGGCAAGGGTCTTTGTCGTGTTAGGCACGTGGTAGACAAACGCCGCT
TTTCCTGTGGTTTTCGAAAAATATCATCATCGGGGCGTTTGTTTATCCTT
ACCTTAAATGTTTCACCGCTGAGACACAGCGCACGACCTGCACCCACCCA
CCCAGGCCACACCACCCCCATTCGCTCACCCACCCACCCAGGCTAGGTCA
CTAACCGAACCGAACCAAACCCAGCCGTAACCCAGCACTACGACGGAAGT
CGAGGGAATCACAGGATCACAGAGAGGGAGGGGGGTCTGTAGCACGACCC
GAAATCAAGATGATTTGAAGCAGGTCAAACGTGTCCCACCTATTTTATCT
CTCAGTATAGAGCCTACGCTCGAAGCCACCGGCCGTTCCATTCAGCCGTG
CGCACCCGTAGGAGCTATCCTGTCGCCGAATAGTTGTGTATGTGATAGAC
CTGCCCAGAGGTTGACCGTTCTACTTCAAGGGTGCTTTTCCAGTTGATTG
CGGACTTGATAAGCCGCATGAGGTCGTTTTAGGTGGGATTCGGGACCTGC
GCTTGTGCGGCACATCTGTGAATTCTTGAATTCTGATCAGGAGATATGTA
AACAGAGAATGCTGCTCGTCAAATGTGTAGTATTTATTAATACGCAGGGC
AACAGTTCAGGAGGCGTTTCTGTCTTAAGATGCTGGATGAAGTCGGGGAT
TGTGTTGATGGCAAGTGGGGGGGGGCGACCACGAGGCCGGAGTTCAGCCG
TTGTGTCGTGCATAATAAAGCCGTGACTGATGTGTTGTGCACAGGAACTA
GTCTGAACACCTCTTTTTTCGATATGCTTAACGCCACCAGCGTTCAGCAG
ACTGTAGTACTACTGTGATGGGGGCAGGAGGCGTATATTGCGGAGTTTCC
TAGACAACAGGCCTATTCCTAGTGCCGAGATATTTCCATAATTATTATTG
TTATTATTTGTGTTCACACATTAGTCCGATCCCTCATACCAGTGGGCGCA
GGGCAAATAGCCATTCGGTGAAACTACAATAGTGTTGACAACAGTGATTC
CTGTGATCATACAGCAGACAAAATGGTTGATTCCTGTGGTCACACAACTT
GCGATTTATCCGTCTCTGCTATTATTGTCGGCAAGTGTCATGAGTATATA
CATGTTGCTCTCTGTGGTCATATGTTTAAATTTGTTATTCATTATTTGAA
GATATTACTGTTGATGAAAAAATTCTTTATCTCACTGGTTTTTCCAATAT
ATATGTATATATAACATATATATTGGCTTTTATTATTATAAATTGAAGTC
TTGGTTAGAACTCAAAAACATCTAATTCGTTTTTCTTTTGCTGAAAAGAT
TTCAATTTTTTAGCATCATCTTTAGCAGATTCTACTACAATATTACTATT
ATTCAAAGCCTTTTTCTTTCAAGATCTTGAAGATTATATATTTTTATTCA
GTTGGGAAACACGTCTGCTTGTTTTTTACACTGAAATTTTTGGTATTGTA
CTGGGCCAATACGTTGACTATACAATAGTGCAACCGAATCTAAACCATCC
GTTGTACTATTATTGTCAGTAGTGCCTAAAGATCCCTAGCTTACTTCGAA
ATGGAAAAAAAATAAATCAAAAGCTATCATCTTCGACGACCTCCGGAATT
TTGACCCGCACCTACCCTCAAAATTTCAGGTTCAAAATCCAAAAACTAGG
TGAGAGTTGCCTGTTTGGTACAAGTATTCTTGTGCCGTAAGCCCTGCGCT
ACGTGGCGCTTCCGACGAGGTCTCTTCCGATTTGCGTGCCGTACGCCCTG
CGCTACGCCTCGACCAAGGTTTGACTAACGTGACCCTCTCGATATGCATA
CCATATATCCCGAAGCGGGCTCTTTATGGACTACTGTGGTAGCCCGACCT
GATAGCAATCATGCCTCACATCAGGACCTTGCCTACCCTGGCAGCGACGC
ACTAAGTCCTCGCCTCGGACCCTTTGCGCGGTCTAATAATATCACCGCTT
CAGTTCCAACGATGTCCCAGATCATGGTCTGGGTGTCGAGACTAATGGCC
ACAAAGAACTCGTGTTGGAACCCTTGCAACACAAGAGGGAACCATAGCTG
CATCTGAAGTGCATGAATTACTGCACAATTTGCACCCTCCTAAATAGTGC
TGATTCTAACGTCACGTCCATCCCGGACCCTTCCTGGAGTTTCGATTGTC
GTGACCCGGTTCTTATCAGAACTTTCCTATCGTCGTTCACTCATCATATC
TAGATATTGTAACACCGAAATGGTCGCGATCTCAGCGAGAGCTTCTTTCC
CTGCCCCCTCGCCTTGATAGCAGTGAAGCCCCTTTGGTCGGGTTTCAATG
CTATCAAGCGAAGGACAAGAACACAGAAGCTCCCGCTGAGGTCGCGTTCA
TTCCAGTGGCAGGAACCTGGACATGATGAAATACTTTGAATCGGATAATT
TTGATGAAAATTGAATCATGGTAGAGAAAAAGGAAGGGTTCGGGATGGAC
GTGGTGTTGGCATCGGCACGAGGAGGGAGCATTGTTTACCACCTGGTCGA
ACGCAATCGTTGGCATTTTTAATTTCATACTTTGTGGTAGCCTGATGGGA
GCAGAACTATAGATCTACTGGGAAGAATGCAATACGCGTCGGCAGATATG
ACTGAGTCTCTTGCTTTTTTCTGGAAAACGGTAGCCTCGTTTAGCACGTG
CGTACAGTGCAGTACTCGATCTGAGAATGATGCCTGGTTGGTATCAAATC
CAATATAGCGGCGAAATGTTACATGTGTGACTTAACGTTGCGATGCGAAG
CAGCACATCATACAGCAACACTCCTGCCCCATTGCAGTAGTTGTTATTTT
CTCCATATGGAGTATAGCTTGTAATATACACTCACATTTGCGAAACAACG
CGAATATTGCAGATTGACCAACACCTGACCATACACTGACTTCTGTCGGC
GACGGTTTGGTTGACTTTCCCGTGACAAACCGGTCCTGTGCTATGTGGAG
TGCCTTCATCATAAACTCAATGTGTGTCCTTTCCACTTCGCATCTCGCGC
ATGGAATACGCAGCATCAGTGCCGCCCAACAACGGATAGACGCCTGGCTC
AACGAGCAGGGATTTCATGTGGCTACGGTCGACGCCCCGCAACAACCACC
TGTGGCCGTTGTTGCACCTGTTACAGCAGCGGCAGCTGCACCCGTGGAAG
TGGCCCCTGTGGAGGTAGCTCCGATGGCGACGCCTCCGGCGGAGGAGACT
CCGGAGGGAGCTGGATACAAGGTGTAACATCGCTAGGTGGCGGGGGGAGG
GGGGGGCTTTGCTGAAGGCCTTGGGATCTCAACACCGTGTGGGATCGATT
TTATGTAAAACGAGCGGAGTTCGTAGCACCTGCAAAACTGGTTTATCAGC
AATGCTTGGAATGGAGGTTAAATTGAAGTTCTGTTATTTGTTTTATCAAA
CGTGCATCATATAGTTCTGGTGTCGTACATTTGAGTCGATGCTGGAGAAG
AACAGCAGTTATACAATGCTGTGGATTTTAACAACTCTGCAAAGTTAGTC
ATGATACATTGAACCCCGGAATATGATCTGTGTATGTGGAAGCAGCGGAA
AAGGTTTTTACCTCAGCCTTCCGGGGGTAAAAAAAATAAAATGATCTGTG
TAACCATGAATATGATCTGTGTAACCATGGTGGTGAGGATTGAATTTGTG
CATATACGGAGATCCCGTCGATTTTCATTCCATGGTGTTTTTTGTTGTAT
ATGTTGACCATATAGGCAGTACAGTCGCGAGAGGTCTCAATTGACCTGGC
GAACGTTGGCAGGCAATGATATTGTTTTCGCGGTCATATTGGCTGTATTA
CGCTTGGTACAGCCATTATTTTGTTGGTTCACATATAGCATTGGACAACG
ACGATACTCTGGAAAATGCATTTGAGCGCGAAGTCGCTGAAACTGGCGAG
TCGTCTTGGGCTCTTGTTGCAAAAATATCAAAACATCAAAAGGGCACAGA
GCAAGGGGGGCCCATAACTCTCAGTTCTAAAGCCATGTCTCAAAATATGT
TTCTAGCCCCAAAAAGAGGGGGAGGGCGGTGGGCAAAGTGGCCCGTATCC
CCTCTTGGAGACATGCACGATCACTGCAGACCCCATGACGCATATAACTT
CCATTTTTATTCACATACGTGGGCTATATGCGACACTATTTGTGGGAAAC
GGCAAGCCTGTGACCGTCGCTCTGAGGGAATGGTGTGTTGGGAAATCAAG
ATTTCGCCGCGTGCACAGATGCCGGCACAGCCATCTATCCGCTCTTTGTG
GATAGATCCCATGATGTACGGTGCAGCATTGCAGTAAGTGTTCAAACAAA
TAGTTTTCGTAACACCCTTTGATATCGCACCCCCTGATATTGTTTTCAAA
GTCAATTTTCTCGACAACGACGATGCTCATGACACCGATAGTGCTATCGT
TGGAAAAGTCACCTTGAGATATTTCGATAGACCTGTTGATGCGGCAGTGC
AGGCTCTTATTTCTCGAGAAAATTGAGTTTGAAATATATTATCAGGCGGT
GTGATATCTAAGGGTGTTGCGGTATTAATTGTCGCCGCTTGCTGCAGGTT
CTCGTAAGCTGTTTTTCGGGCCTGGTGACCGATGTAGCTTGCCTACGGTG
GGCCTGCGCGCGAGCATTAGCTCATAACCTCAAAATAGCGTGATCATATA
TTTTTAGTTCAAAAGTAGGTGGGTGGGGGGGCTGACTCAAAGAAAAGTAG
TCACGGCCCCCCTCGTACAGAGATAAGAAAAAAATATGTGGCAGCCACCT
TAGAAACACCTTAAAGGGGGGTAATGATCACCCCATGTCTGTCGAGGATA
GTTACCCTCGTTTTCCCGAAGATGTAAATTTTTGTTTTACCGAAACAATT
GCGATGAAACCAACCGTTGCTGAATGCACTACATTTTTTCATCCACAGAT
TAAGATCGAGTGGGATGGTGCGATTCACGAGGTAACCTGCGATGCGGAGA
CGACAGTGCTTGACGCTGCCATGGAAGCCGGTATCGAACTACCCCACTCG
TGCATGTCGGGGAGCTGTCTCACTTGCCCGGCAAAGCTGAAGAGCGGCAA
GGTGGACCAGAGCGAGGGGGTGTTGGAAGAAGAACAGACAGATGCGGTGA
GTTCGTGTTCTTCGCACTGCGTGCGCTCACGTAGTTTTGAGAGAGTAACA
ACATTCAGTCAACATGTGCTTAAAACCGGGTGGCACTGGAGGCTGAAAAC
AACACTAAAGGCGTCTGACCGTCCCGCCGCAAAAAAAGGGGGAAAGTGGG
TGAGGGTTCTTTGTCACGAGGGGGGGGGGGGCTGGCTTTCGACCCCGTAG
TGCTGTATGGTAGCGGATTGTTGACGAAAAACACGGGGTTAGACCAATTG
TGCACGCTTATTTACCCAACTTGCAATCAAAAATGCGTCCGCCTCCTATA
CATTGGTGAAGTTGTTTGGGGCACAAGATCCCTTGAGAGATCCTCCGGCG
GTTTAGGGGTGTCAAACAAACGTTTACTATTTGTCATTTCGTTGTTGGGC
TGTTGATGCCTTAAACTATGCCGCCGCCAGGGTTCCGCTTGCTCTCGTCG
ACTACAGGCGTGTCACATTCGCTGTCGGCGAGAGCGAAATATGCAGCTGT
AATAGTTGGCTTGTTTTTACTGTGGGGCCGGAGAAGAAGTCCCCATCTGC
CAAGAAAAGCCTACAATTTCCGTTGCGCTTTTTCTGGTTTTGTATTGGAT
GCAGCACAAATGGTTGGGCGAAAAATATCGCTGTATGTTCTCTATCTGCA
CTGTCTGTGGCTGTCAGAACAGCCATGGTGGTGTTTCATTTCTTTTCCTG
GCGTGCGTTTTTGGACGGCACACGTACCCAGTACAGTCGGTTAATCATGG
TGTGATTTGCGCTTAGCATTCCAGTCACTGCCGCTGTGGTACAACGCAAA
ACGATACTGACTTCTGTCTCTTTGTACTAATGACATCATTTTCTGTACTA
ATTACATCATTTTCTGTACTGTCCCTAGAGCTGGCTCCCTATCCTCGTAA
TCGTGTCTTGGGCGTTTTGTCACCAAGAAAATCCAACGTGGTTCTATCTA
TTTTCCGAGCAGAGATTTTTCAGGGAATTGTACAAAGTCCGTCGCCAAAA
GGACTGAAGATGCCAGAGTGGAGAAACAAACTTATTGCATTTACTGTCTA
AATCAGTTCTATGACTTAAGATAATCAGTTGTACGCATGCGTCAGCGCTG
AGTGGTTCGCCAACGAACTCCGTGGTAAGGCCGTAATGGTGGAGAATTAG
TTGCCTCAAATTCATGCAACCTAATGTTACCATACTTTGTTGTTGGATGA
ATGCTTTCGTGTGCGTTCAGCGAAGTCGATTGTGCGACACATCTGATGGA
CACGTTCGTCGGTTCAGTTCCTTAACGCCACGGCAGTTGTTTGTGTTCCT
TCACACTCCAAGCTCGCCCGCGACCCGCAAACTTGACCACATGTTCGGTT
CATGTGCTGGCCGTCTCTTGTCTCCCGGTTCTTGCCGTTTGCCTCTTTTG
TGCATTTTTTTTATGGGTGTCCTTTTTGTCCTGCCAGGGTTACATGCTGA
CGTGCGTATCGTACCCGTTGAGCGACGTTGAATTCGCTGTGATTGAAGAG
GACGAGCTTCCGTGACGTCATTCGTCGTTCCGCAGCTGTGATTGGTTCGG
TGATGCGAACGTAGTACATCAATAACGATGAATGAGCACGTCCCAAATGA
CTGTATTTTAGTCGTGTTTCATATGTGCGCGTGAACAGGCCGGGCTCGAT
CGATTCAGGCTCTGGCGATGATCTCGGTGATAAAACAGTTGGTTTCAGCT
TTTAGAGACATAATTTTGCGTCCGAGTGTTTTGGTGTGGCAGGGTAGATA
TCAGACTCTCGATTTGTGATAGGGTAGACGTTGGATGCTTGATTGTATAC
GGACTGGTTTTGTGCGGAGGTGGTGTTATGGGTCTTTGTTGTGTCCGTAC
CTTTTTTTCACATGTCGTTTGTATTGCAGAGTCTGCTTGCCTCAGTGCTG
CGTTATAGCAGCTGCCAAAAACACGAATTTATGACCCGCGGGCACCCGGC
TTTTACTATTACTCCTGACTTTTCTGCGGTGCGATGTAAACAAGTGACAC
TCTCTTCCAGTGTTCTACTGTAGTAGAGAGAAAGGGGAAGGTGCTCGCGG
TTTTCCTTTTGGTCAACTTTTTTAAAGGATGATTCTGATTGGTCTTACAA
TAAAGTTGTGGGCATCTATTCTTTCTTTCTGCTTATCATGCCATCGCGTT
GCTTATAATTTAATGTGATGAGTCGAGTGATTCGTCCCTCTTGGGGCCTA
TTTAGCGTAGATATAGCTTGTTTCTTGACTGAAATTCAAAGGGAATAGAG
CGTTTCGCCCTCTTGCCACCTACATGAGGTCTGCCCTGGTGGAAGCGTTG
TGCGATGAGCAAAATATATTTTTTCTCGTCATGAGATTGTTTGTGGGCTG
CAACTTGTCTTGATGGAGAACACGATTATTCACCGTGGCTGTGGTGAACA
TCAATTTCAGGGGTGCTCACGGTAATTGTATTGGAAAGGCGAGTATATGT
ACGGTGCGGTAAGTAATTTTCTCGGTATTATGTCGGTAGACGTTGTGTGT
CATATCGGTAGCACAGTAGGGTATGTTAAATAAATTTCTTGGTATCTTCA
CGGTAAGTGGTATTCGGCTTTTGATGCTTGTCGAACAAAATGAGCGCCTC
ACACTTCACGGGGCTTATTTACTTACATAATTAGCCCCTGACTTTGGCCC
AACGTACTAAATCGCAACTGCAATTTCATGTCAAGCTGCTTTTCCAGCAC
CGAGGGAACTTCCTT back to topCoding sequence (CDS) from alignment at H-paniculata_contig4464:3533..12697+ >mRNA_H-paniculata_contig4464.11258.1 ID=mRNA_H-paniculata_contig4464.11258.1|Name=mRNA_H-paniculata_contig4464.11258.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1956bp|location=Sequence derived from alignment at H-paniculata_contig4464:3533..12697+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCCAAGACTTGTGCGAAGTCCAGCACCACAAGTGTCCGAATGAACGC
TACTGCTACTTTGACAAGGAGGAGGTGGCTGAGTTGTTGCTCGGTTTTGC
TAGCCTGCGGGTTGTGCGGAGCTTTTCTCCCGCCCCCCGCCGCGCTTGGT
CCCACACTTAACCGCAACCACCGCGTCGTTGTTTCTCTGTCGGATCTTCT
GCAGCGCGGCGTGCGATCACGTACTGCTGGGACTAGTACTAACAACATAG
CGTGCCGCATGCAGCAAGAGGGTGGAAACAATGAATTACAGCTCGCTGTG
AAGACGTTGGCTGCACAGGTCCAGGACTTGACAACGATGGTCAAGCAACT
GGCGGATGATACTACCACGGCTACGGGCGGGGCGTCGCAGATCATCAATG
GGGCTGCCGTTGAAAACAATGCGGCGGTGCCTGTTGCACCATCGACTGCG
CCCGCGGGGAAGGGGATGAAGGCGGGACCGACGGAGCTTGTCAGATGGCC
AAGACTTGTGCGAAGTCCAGCACCACAAGTGTCCGAATGAACGCTACTGC
TACTTTGACAAGGAGGAGGTGGCTGAGTTGTTGCTCGGTTTTGCTAGCCT
GCGGGTTGTGCGGAGCTTTTCTCCCGCCCCCCGCCGCGCTTGGTCCCACA
CTTAACCGCAACCACCGCGTCGTTGTTTCTCTGTCGGATCTTCTGCAGCG
CGGCGTGCGATCACGTACTGCTGGGACTAGTACTAACAACATAGCGTGCC
GCATGCAGCAAGAGGGTGGAAACAATGAATTACAGCTCGCTGTGAAGACG
TTGGCTGCACAGGTCCAGGACTTGACAACGATGGTCAAGCAACTGGCGGA
TGATACTACCACGGCTACGGGCGGGGCGTCGCAGATCATCAATGGGGCTG
CCGTTGAAAACAATGCGGCGGTGCCTGTTGCACCATCGACTGCGCCCGCG
GGGAAGGGGATGAAGGCGGGACCGACGGAGCTTGTCAGCATCAGTGCCGC
CCAACAACGGATAGACGCCTGGCTCAACGAGCAGGGATTTCATGTGGCTA
CGGTCGACGCCCCGCAACAACCACCTGTGGCCGTTGTTGCACCTGTTACA
GCAGCGGCAGCTGCACCCGTGGAAGTGGCCCCTGTGGAGGTAGCTCCGAT
GGCGACGCCTCCGGCGGAGGAGACTCCGGAGGGAGCTGGATACAAGCATC
AGTGCCGCCCAACAACGGATAGACGCCTGGCTCAACGAGCAGGGATTTCA
TGTGGCTACGGTCGACGCCCCGCAACAACCACCTGTGGCCGTTGTTGCAC
CTGTTACAGCAGCGGCAGCTGCACCCGTGGAAGTGGCCCCTGTGGAGGTA
GCTCCGATGGCGACGCCTCCGGCGGAGGAGACTCCGGAGGGAGCTGGATA
CAAGATTAAGATCGAGTGGGATGGTGCGATTCACGAGGTAACCTGCGATG
CGGAGACGACAGTGCTTGACGCTGCCATGGAAGCCGGTATCGAACTACCC
CACTCGTGCATGTCGGGGAGCTGTCTCACTTGCCCGGCAAAGCTGAAGAG
CGGCAAGGTGGACCAGAGCGAGGGGGTGTTGGAAGAAGAACAGACAGATG
CGATTAAGATCGAGTGGGATGGTGCGATTCACGAGGTAACCTGCGATGCG
GAGACGACAGTGCTTGACGCTGCCATGGAAGCCGGTATCGAACTACCCCA
CTCGTGCATGTCGGGGAGCTGTCTCACTTGCCCGGCAAAGCTGAAGAGCG
GCAAGGTGGACCAGAGCGAGGGGGTGTTGGAAGAAGAACAGACAGATGCG
GGTTACATGCTGACGTGCGTATCGTACCCGTTGAGCGACGTTGAATTCGC
TGTGATTGAAGAGGACGAGCTTCCGTGAGGTTACATGCTGACGTGCGTAT
CGTACCCGTTGAGCGACGTTGAATTCGCTGTGATTGAAGAGGACGAGCTT
CCGTGA back to top
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