prot_H-paniculata_contig4464.11258.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig4464.11258.1
Unique Name	prot_H-paniculata_contig4464.11258.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	326

Homology

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BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: D7G5N8_ECTSI (Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5N8_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 2.240e-62
Identity = 148/305 (48.52%), Postives = 178/305 (58.36%), Query Frame = 0

Query:   27 LSCCSVLLACGLCGAFLPPPAALGPTLNRNHRVVVSLSDLLQRGVRSRTAGTSTNNIACRMQQ-EGGNNELQLAVKTLAAQVQDLTTMVKQLADDTTTATGGASQIINGAAVENNAAVPVAPSTAPAGKGMKAGPTELVSISAAQQRIDAWLNEQGFHVATVDAPQQPPVAVVAPVTAAAAAPVEVXXXXXXXXXXXPAEETPE-----GAGYKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDELP 325
            L+    L  CGLCGAF+PP                                      A RMQQ  G + ELQ+AV  LA QV++LT MV QLA +      GA++ ING  V+  +A+PV  + A      K G T LVS SAAQQRID WL E G   A+       PVA               XXXXXXXXXXX            G+GYK+KIEW+GAIHEV CDAETT+L+AAM+AG+ELP SCMSGSCLTCP K+ SG VDQSEGVLE+EQ DAG++LTC+SYP SDV FAV++E++LP
Sbjct:   11 LTLACALAWCGLCGAFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS------AVRMQQGSGSDQELQVAVSKLAGQVEELTAMVAQLAAEPG-GNAGAAKAINGGVVDGGSALPVVSTKA------KGGSTPLVSTSAAQQRIDQWLRESGGEAASA------PVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGYKVKIEWEGAIHEVNCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKIVSGSVDQSEGVLEDEQKDAGFLLTCISYPESDVHFAVVDEEDLP 296

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BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: A0A835YL41_9STRA (Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL41_9STRA)

HSP 1 Score: 162 bits (409), Expect = 7.760e-45
Identity = 111/232 (47.84%), Postives = 136/232 (58.62%), Query Frame = 0

Query:   95 ELQLAVKTLAAQVQDLTTMVKQLA-DDTTTATGGASQIINGAAVENNAAVPVAPSTAPAGKGMKAGPTE-LVSISAAQQRIDAWLNEQGFHVATVDAPQQPPVAVVAPVTAAAAAPVEVXXXXXXXXXXXPAEETPEGAGYKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 324
            EL  AV+ L AQV  LT +VK++A  +   A    +  INGAAV   A  P   +   AG    A P E LV +SAA+ RI ++L  QG                       AA P   XXXX          E P G GY + I+WDGA H V CD ETTVL+AAM+AG++LPHSCMSGSCLTCP +L +G+V+Q +GVLE++Q  AG MLTCVSYPLSD+ F VI EDEL
Sbjct:   11 ELVKAVEALQAQVTQLTALVKEMAASEANGAAAAPAAKINGAAVPLKA--PTLQTGLIAGTVASAPPGEILVPVSAAEARIQSFLASQGKAAPXXXXXXXXXXXXXXXXXXXAAVPAAXXXXXP---------EAPPGDGYVVTIDWDGATHVVRCDGETTVLEAAMDAGLDLPHSCMSGSCLTCPGRLSAGRVEQGDGVLEDDQIAAGLMLTCVSYPLSDLRFEVIGEDEL 231

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BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: A0A5N6MZ86_9ASTR (Ferredoxin n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MZ86_9ASTR)

HSP 1 Score: 107 bits (268), Expect = 5.420e-25
Identity = 49/92 (53.26%), Postives = 64/92 (69.57%), Query Frame = 0

Query:  233 YKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 324
            YK+ IE DG   E+  D + T+L+ A+EAG+ +PH C  G C+TCPAKL SG VDQSEG+L E+  + GY L CVSYP SD +  +I E+EL
Sbjct:   50 YKVAIEHDGQTTELEVDPDETILEKALEAGLAVPHDCKLGVCMTCPAKLLSGSVDQSEGMLSEDVIERGYSLLCVSYPKSDCQVKIIPEEEL 141

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BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: A0A830CLQ9_9LAMI (Ferredoxin n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830CLQ9_9LAMI)

HSP 1 Score: 106 bits (265), Expect = 1.570e-24
Identity = 47/98 (47.96%), Postives = 66/98 (67.35%), Query Frame = 0

Query:  227 TPEGAGYKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 324
            TP    YK+ IE DG   E+  + + T+L  A++AG+++PH C  G C+TCPA+L +GKVDQSEG+L ++  + GY LTC SYP SD    +I E+EL
Sbjct:   46 TPSVHAYKVVIEHDGVATELEVEPDETILSKALDAGLDVPHDCKLGVCMTCPAQLVAGKVDQSEGMLSDDVVERGYALTCASYPRSDCRIKIIPEEEL 143

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BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: UPI001CB96E6F (ferredoxin C 1, chloroplastic-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB96E6F)

HSP 1 Score: 106 bits (264), Expect = 2.320e-24
Identity = 50/98 (51.02%), Postives = 64/98 (65.31%), Query Frame = 0

Query:  227 TPEGAGYKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 324
            T +   YKI IE DG   EV  D + T+L+ A+E G+ +PH C  G C+TCPAKL SG VDQSEG+L ++  + GY L CVSYP SD    +I E+EL
Sbjct:   48 TTQKCNYKISIEHDGETTEVEVDPDETILEKALETGMSVPHDCKLGVCMTCPAKLISGNVDQSEGMLSDDVIERGYSLLCVSYPKSDCVVKIIPEEEL 145

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BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: A0A7J7LHT5_9MAGN (Ferredoxin n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7LHT5_9MAGN)

HSP 1 Score: 103 bits (258), Expect = 1.140e-23
Identity = 46/92 (50.00%), Postives = 63/92 (68.48%), Query Frame = 0

Query:  233 YKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 324
            YK+ IE +G+I E+  D + T+L+ A++ G+ +PH C  G C+TCPAKL SG VDQSEG+L ++  D GY L CV+YP SD     I E+EL
Sbjct:   39 YKVVIEHEGSIKELEVDEDETILNKALDIGLSVPHDCKLGVCMTCPAKLMSGSVDQSEGMLSDDVVDNGYALLCVAYPRSDCHIRTIPEEEL 130

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BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: UPI001CB9638D (ferredoxin C 1, chloroplastic-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9638D)

HSP 1 Score: 104 bits (259), Expect = 1.170e-23
Identity = 48/98 (48.98%), Postives = 64/98 (65.31%), Query Frame = 0

Query:  227 TPEGAGYKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 324
            T +   YKI IE DG   E+  D + T+L+ A+E G+ +PH C  G C+TCPAK+ SG VDQSEG+L ++  + GY L CVSYP SD    +I E+EL
Sbjct:   46 TTQKCHYKISIEHDGQATEIEVDPDETILEKALETGMSVPHDCKLGVCMTCPAKMISGNVDQSEGMLSDDVIERGYSLLCVSYPKSDCVVKIIPEEEL 143

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BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: A0A6P5SE90_PRUAV (Ferredoxin n=7 Tax=Prunus TaxID=3754 RepID=A0A6P5SE90_PRUAV)

HSP 1 Score: 103 bits (258), Expect = 1.390e-23
Identity = 45/92 (48.91%), Postives = 64/92 (69.57%), Query Frame = 0

Query:  233 YKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 324
            YK+ +E +G   E+  +A+ T+L+ A+E+G+ +PH C  G C+TCPA+L SGKVDQ+EG+L ++  + GY L CVSYP SD     I EDEL
Sbjct:   46 YKVVVEHEGLSTELEVEADETILEKALESGLSVPHDCKLGVCMTCPARLLSGKVDQNEGMLSDDVVEGGYTLLCVSYPQSDCHIKTIPEDEL 137

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BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: UPI0010A2FF49 (ferredoxin C 1, chloroplastic n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A2FF49)

HSP 1 Score: 103 bits (258), Expect = 1.390e-23
Identity = 46/92 (50.00%), Postives = 61/92 (66.30%), Query Frame = 0

Query:  233 YKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 324
            YK+ IE  G + E+  D E T+L  A+++G+E+PH C  G C+TCPA+L SG VDQSEG+L ++  + GY L C SYP SD     I EDEL
Sbjct:   46 YKVVIEHQGELRELEIDPEETILSKALDSGLEVPHDCKLGVCMTCPARLLSGSVDQSEGMLSDDVVERGYALLCASYPRSDCHIRTIPEDEL 137

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BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: UPI00053C344A (uncharacterized protein LOC104822270 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C344A)

HSP 1 Score: 103 bits (257), Expect = 2.170e-23
Identity = 47/92 (51.09%), Postives = 63/92 (68.48%), Query Frame = 0

Query:  233 YKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 324
            YK+ +E +GA  E+  +AE T+L  A+++G+++PH C  G C+TCPAKL +G VDQSEG+L E+    GY L CVSYP SD     I EDEL
Sbjct:   50 YKVVVEPNGATTELEVEAEETILSKALDSGLDVPHDCKLGVCMTCPAKLVNGTVDQSEGMLSEDVVARGYTLLCVSYPTSDCRIKTIPEDEL 141

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G5N8_ECTSI	2.240e-62	48.52	Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G...	[more]
A0A835YL41_9STRA	7.760e-45	47.84	Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 Re...	[more]
A0A5N6MZ86_9ASTR	5.420e-25	53.26	Ferredoxin n=2 Tax=Mikania micrantha TaxID=192012 ...	[more]
A0A830CLQ9_9LAMI	1.570e-24	47.96	Ferredoxin n=1 Tax=Phtheirospermum japonicum TaxID...	[more]
UPI001CB96E6F	2.320e-24	51.02	ferredoxin C 1, chloroplastic-like n=1 Tax=Erigero...	[more]
A0A7J7LHT5_9MAGN	1.140e-23	50.00	Ferredoxin n=1 Tax=Kingdonia uniflora TaxID=39325 ...	[more]
UPI001CB9638D	1.170e-23	48.98	ferredoxin C 1, chloroplastic-like n=1 Tax=Erigero...	[more]
A0A6P5SE90_PRUAV	1.390e-23	48.91	Ferredoxin n=7 Tax=Prunus TaxID=3754 RepID=A0A6P5S...	[more]
UPI0010A2FF49	1.390e-23	50.00	ferredoxin C 1, chloroplastic n=1 Tax=Prosopis alb...	[more]
UPI00053C344A	2.170e-23	51.09	uncharacterized protein LOC104822270 n=1 Tax=Taren...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 93..120
None	No IPR available	PANTHER	PTHR43112	FAMILY NOT NAMED	coord: 224..324
None	No IPR available	PANTHER	PTHR43112:SF9	FERREDOXIN C 1, CHLOROPLASTIC	coord: 224..324
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..41
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 42..325
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 37..41
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..25
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 26..36
None	No IPR available	TMHMM	TMhelix		coord: 26..48
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 238..310 e-value: 1.8E-14 score: 53.4
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 233..322 score: 11.719
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 220..324 e-value: 9.5E-26 score: 91.8
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 233..324 e-value: 1.5E-26 score: 90.0
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 219..322

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig4464	contig	H-paniculata_contig4464:3664..11497 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig4464.11258.1	mRNA_H-paniculata_contig4464.11258.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig4464 3533..12697 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig4464.11258.1 ID=prot_H-paniculata_contig4464.11258.1|Name=mRNA_H-paniculata_contig4464.11258.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=326bp
MAKTCAKSSTTSVRMNATATLTRRRWLSCCSVLLACGLCGAFLPPPAALG
PTLNRNHRVVVSLSDLLQRGVRSRTAGTSTNNIACRMQQEGGNNELQLAV
KTLAAQVQDLTTMVKQLADDTTTATGGASQIINGAAVENNAAVPVAPSTA
PAGKGMKAGPTELVSISAAQQRIDAWLNEQGFHVATVDAPQQPPVAVVAP
VTAAAAAPVEVAPVEVAPMATPPAEETPEGAGYKIKIEWDGAIHEVTCDA
ETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDA
GYMLTCVSYPLSDVEFAVIEEDELP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001041	2Fe-2S_ferredoxin-type
IPR012675	Beta-grasp_dom_sf
IPR010241	Fd_pln
IPR036010	2Fe-2S_ferredoxin-like_sf