prot_H-paniculata_contig4464.11257.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4464.11257.1 vs. uniprot
Match: D7G5N9_ECTSI (DNA-directed RNA polymerase subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5N9_ECTSI) HSP 1 Score: 214 bits (545), Expect = 2.010e-70 Identity = 96/108 (88.89%), Postives = 98/108 (90.74%), Query Frame = 0
Query: 1 MLFCPTCGNLLMVESGPQGWTRFCCQTCPYIHPMEPSDKITRKIVLKKKTVDDIMGGDDAWANVDKTQATCPKCPNKEAFFMQVQLRSADEPMTCFYKCTGCKFRWNE 108
MLFCPT G+LLMVESGPQGWTRFCCQTCPYIHPMEPSDKITRKI LKKK VDDIMGGDDAWANVDKTQ TCP C NKEAFF+ VQLRSADEPMTCFYKCT CK RW E
Sbjct: 1 MLFCPTDGSLLMVESGPQGWTRFCCQTCPYIHPMEPSDKITRKIALKKKAVDDIMGGDDAWANVDKTQTTCPFCNNKEAFFLMVQLRSADEPMTCFYKCTNCKQRWKE 108
BLAST of mRNA_H-paniculata_contig4464.11257.1 vs. uniprot
Match: A0A836CB68_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB68_9STRA) HSP 1 Score: 156 bits (394), Expect = 2.420e-47 Identity = 68/112 (60.71%), Postives = 81/112 (72.32%), Query Frame = 0
Query: 1 MLFCPTCGNLLMVESGPQGWTRFCCQTCPYIHPMEPSDKITRKIVLKKKTVDDIMGGDDAWANVDKTQATCPKCPN----KEAFFMQVQLRSADEPMTCFYKCTGCKFRWNE 108
MLFCPTCGNLLMVE+ +G RF CQTCPY+HP+ K+T+ + L++K VDD++GG DAW NVDK C C + KEA+F Q QLRSADEPMT FYKC C FRWNE
Sbjct: 1 MLFCPTCGNLLMVEAATRGGQRFACQTCPYVHPLGQGGKVTKALTLQRKEVDDVLGGADAWVNVDKAPVACADCKDPGKGKEAYFFQAQLRSADEPMTVFYKCVDCGFRWNE 112
BLAST of mRNA_H-paniculata_contig4464.11257.1 vs. uniprot
Match: A0A024UTD8_9STRA (DNA-directed RNA polymerase subunit n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024UTD8_9STRA) HSP 1 Score: 148 bits (374), Expect = 2.250e-44 Identity = 65/108 (60.19%), Postives = 83/108 (76.85%), Query Frame = 0
Query: 1 MLFCPTCGNLLMVESGPQGWTRFCCQTCPYIHPMEPSDKITRKIVLKKKTVDDIMGGDDAWANVDKTQATCPKCPNKEAFFMQVQLRSADEPMTCFYKCTGCKFRWNE 108
M FCPTCGNLLMVE G RFCCQTCPYI+ + + K+ K+ L++K VDD++GGD+AW NVD+T CP C + +A+FMQ+Q+RSADEP T FYKCTGCK +WN+
Sbjct: 1 MHFCPTCGNLLMVEPDSDGM-RFCCQTCPYIYKI--NQKVETKVPLQRKKVDDVLGGDEAWENVDQTDTRCPFCEHTKAYFMQIQIRSADEPSTTFYKCTGCKKQWND 105
BLAST of mRNA_H-paniculata_contig4464.11257.1 vs. uniprot
Match: A0A7S0PIB0_CAFRO (DNA-directed RNA polymerase subunit n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PIB0_CAFRO) HSP 1 Score: 142 bits (358), Expect = 9.160e-42 Identity = 63/108 (58.33%), Postives = 81/108 (75.00%), Query Frame = 0
Query: 1 MLFCPTCGNLLMVESGPQGWTRFCCQTCPYIHPMEPSDKITRKIVLKKKTVDDIMGGDDAWANVDKTQATCPKCPNKEAFFMQVQLRSADEPMTCFYKCTGCKFRWNE 108
MLFCPTCGN+L++E G T+F C TCPYI + + KIT+ I L++KTVDD++GG AW NVD+T A CP C ++ A+FMQ+Q+RSADEPMT FYKC C RWN+
Sbjct: 16 MLFCPTCGNMLLIEGG--AGTKFFCTTCPYIQRV--TTKITKSITLERKTVDDVLGGAAAWENVDQTDALCPACGHRRAYFMQLQIRSADEPMTTFYKCVACSGRWND 119
BLAST of mRNA_H-paniculata_contig4464.11257.1 vs. uniprot
Match: A0A1Y1VKS4_9FUNG (DNA-directed RNA polymerase subunit n=3 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y1VKS4_9FUNG) HSP 1 Score: 141 bits (356), Expect = 1.320e-41 Identity = 62/107 (57.94%), Postives = 79/107 (73.83%), Query Frame = 0
Query: 3 FCPTCGNLLMVESGPQGWTRFCCQTCPYIHPM-EPSDKITRKIVLKKKTVDDIMGGDDAWANVDKTQATCPKCPNKEAFFMQVQLRSADEPMTCFYKCTGCKFRWNE 108
FCP+CGN+L+++ QG F CQTCPY+ P+ P ++T+ K+K VDD++GG AW NVD T+ATCPKC N +AFFMQ+Q RSADEPMT FYKCT C F+W E
Sbjct: 4 FCPSCGNMLLLQLNLQGIQEFYCQTCPYVFPIIRPQTQVTQ---FKRKEVDDVLGGAKAWENVDSTEATCPKCENGKAFFMQIQTRSADEPMTIFYKCTECGFQWRE 107
BLAST of mRNA_H-paniculata_contig4464.11257.1 vs. uniprot
Match: A0A058ZBP1_FONAL (DNA-directed RNA polymerase subunit n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058ZBP1_FONAL) HSP 1 Score: 140 bits (353), Expect = 3.890e-41 Identity = 61/110 (55.45%), Postives = 82/110 (74.55%), Query Frame = 0
Query: 1 MLFCPTCGNLLMVESGPQ--GWTRFCCQTCPYIHPMEPSDKITRKIVLKKKTVDDIMGGDDAWANVDKTQATCPKCPNKEAFFMQVQLRSADEPMTCFYKCTGCKFRWNE 108
MLFCP CGN+L+V S G +F CQTCPY+H ++ KI+ +I+LK+K VDD++GG+ +W NVD T+ CPKC N+ A+FMQ+Q+RSADEPM+ FYKCT C +W E
Sbjct: 1 MLFCPGCGNVLLVNSDASDIGDFQFACQTCPYVHSIKR--KISSRIILKRKEVDDVLGGEGSWDNVDSTEVPCPKCDNRRAYFMQIQIRSADEPMSTFYKCTKCAAQWRE 108
BLAST of mRNA_H-paniculata_contig4464.11257.1 vs. uniprot
Match: D5AAK0_PICSI (DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis TaxID=3332 RepID=D5AAK0_PICSI) HSP 1 Score: 140 bits (353), Expect = 4.020e-41 Identity = 65/111 (58.56%), Postives = 83/111 (74.77%), Query Frame = 0
Query: 1 MLFCPTCGNLLMVESGPQGWT-RFCCQTCPYIHPMEPSDKITRKIVLKKKTVDDIMGGDDAWANVDKTQATCPKCPNKEAFFMQVQLRSADEPMTCFYKCTG--CKFRWNE 108
M FCPTCGNLL +E + RF C TCPY+ P+E KI++K+ LKKK VDD+ GG++AW NVD+T+ATCPKC +AFFMQ+Q+RSADEPM+ FYKC C+FRW +
Sbjct: 1 MEFCPTCGNLLQIEHPYMSQSLRFFCPTCPYVFPIER--KISKKLQLKKKEVDDVFGGEEAWKNVDRTEATCPKCSFGKAFFMQIQIRSADEPMSTFYKCCNNQCQFRWRQ 109
BLAST of mRNA_H-paniculata_contig4464.11257.1 vs. uniprot
Match: A0A7S0RJ62_9CHLO (DNA-directed RNA polymerase subunit n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RJ62_9CHLO) HSP 1 Score: 139 bits (349), Expect = 1.490e-40 Identity = 62/108 (57.41%), Postives = 80/108 (74.07%), Query Frame = 0
Query: 1 MLFCPTCGNLLMVESGPQGWTRFCCQTCPYIHPMEPSDKITRKIVLKKKTVDDIMGGDDAWANVDKTQATCPKCPNKEAFFMQVQLRSADEPMTCFYKCTGCKFRWNE 108
M FCPTCG LLMVE R+ CQTCPY++ ++ KI ++ VL+ K VDD++GGD+AWANVD+T+ +CPKC + +A+FMQVQ RSADEPMT FYKC C RW +
Sbjct: 2 MTFCPTCGTLLMVEYCELTRLRYACQTCPYVYMIDR--KIVKEHVLETKEVDDVLGGDEAWANVDRTEVSCPKCDHGQAYFMQVQTRSADEPMTIFYKCCKCANRWKD 107
BLAST of mRNA_H-paniculata_contig4464.11257.1 vs. uniprot
Match: A0A0D6R9A9_ARACU (DNA-directed RNA polymerase subunit n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R9A9_ARACU) HSP 1 Score: 139 bits (349), Expect = 1.680e-40 Identity = 65/113 (57.52%), Postives = 84/113 (74.34%), Query Frame = 0
Query: 1 MLFCPTCGNLLMVESGPQGWT---RFCCQTCPYIHPMEPSDKITRKIVLKKKTVDDIMGGDDAWANVDKTQATCPKCPNKEAFFMQVQLRSADEPMTCFYKCTG--CKFRWNE 108
M FCPTCGN+L +E P G RF C TCPY+ P++ KIT+KI L KK VDD+ GG++AW NVD+T+ATCPKC + +A+FMQ+Q+RSADEPM+ FYKC C+FRW +
Sbjct: 1 MEFCPTCGNMLQIER-PYGVIKALRFFCPTCPYVFPIK--GKITKKIPLAKKEVDDVFGGEEAWKNVDRTEATCPKCNHGQAYFMQIQIRSADEPMSTFYKCCNFQCQFRWRQ 110
BLAST of mRNA_H-paniculata_contig4464.11257.1 vs. uniprot
Match: A0A077ZVQ1_STYLE (DNA-directed RNA polymerase subunit n=2 Tax=Oxytrichidae TaxID=57506 RepID=A0A077ZVQ1_STYLE) HSP 1 Score: 138 bits (348), Expect = 2.050e-40 Identity = 60/108 (55.56%), Postives = 81/108 (75.00%), Query Frame = 0
Query: 1 MLFCPTCGNLLMVESGPQGWTRFCCQTCPYIHPMEPSDKITRKIVLKKKTVDDIMGGDDAWANVDKTQATCPKCPNKEAFFMQVQLRSADEPMTCFYKCTGCKFRWNE 108
MLFCPTC NLL++E + RF C+TCPY+ +E + +K+ L++K VDD++GG +AW NVD+ +A CPKC NK A+FMQ+Q+RSADEPMT FYKCT C ++W E
Sbjct: 1 MLFCPTCANLLLIEKTHSDF-RFFCKTCPYVFVVEQN--FEKKMQLERKEVDDVLGGKEAWENVDQIEAQCPKCNNKRAYFMQIQIRSADEPMTTFYKCTQCSYQWRE 105 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4464.11257.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig4464.11257.1 ID=prot_H-paniculata_contig4464.11257.1|Name=mRNA_H-paniculata_contig4464.11257.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=109bpback to top |