prot_H-paniculata_contig1175.1118.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1175.1118.1
Unique Nameprot_H-paniculata_contig1175.1118.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length230
Homology
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BLAST of mRNA_H-paniculata_contig1175.1118.1 vs. uniprot
Match: D8LH28_ECTSI (UDENN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH28_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 2.070e-14
Identity = 50/85 (58.82%), Postives = 57/85 (67.06%), Query Frame = 0 
Query:    8 GPGAGDG----GVDV--------DAAVTVGKALLEVQRQVLRKLCATVYPEFQASPSYEHLCEELTTGARSSARARQPASPPYSL 80
            GPGAGD     G D         D AV+VGKALL++QR VLRK+CA+VYP+FQAS S+EHLC ELTTG RS AR   P  PP  L
Sbjct:   59 GPGAGDASSGDGPDTQKGRDAGDDYAVSVGKALLDMQRHVLRKICASVYPDFQASSSHEHLCAELTTGTRSPARL--PPGPPDQL 141
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BLAST of mRNA_H-paniculata_contig1175.1118.1 vs. uniprot
Match: A0A6H5JHW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHW4_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 2.980e-5
Identity = 28/42 (66.67%), Postives = 31/42 (73.81%), Query Frame = 0 
Query:   39 LCATVYPEFQASPSYEHLCEELTTGARSSARARQPASPPYSL 80
            LCA+VYP+FQAS S+EHLC ELTTG RS AR   P  PP  L
Sbjct:  869 LCASVYPDFQASSSHEHLCAELTTGTRSPARL--PPGPPDEL 908
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1175.1118.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LH28_ECTSI2.070e-1458.82UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHW4_9PHAE2.980e-566.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1175contigH-paniculata_contig1175:4307..6098 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1175.1118.1mRNA_H-paniculata_contig1175.1118.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1175 4307..6098 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1175.1118.1 ID=prot_H-paniculata_contig1175.1118.1|Name=mRNA_H-paniculata_contig1175.1118.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=230bp
TGLAAAVGPGAGDGGVDVDAAVTVGKALLEVQRQVLRKLCATVYPEFQAS
PSYEHLCEELTTGARSSARARQPASPPYSLSNSPTTNVDANGVFYLDDGG
GGDDGIGGDCSATASAGGYSRLSMTPSPQEKQQHRLRQEERSPSPFSLLS
SSPEKRGNSKNDDSDSGNHLRRSIDPSIGSGSVGGSGSVNGRSGTGGSER
SSWSAGGQIDSSVVEMFGPQFGVLWEASRG
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