prot_H-paniculata_contig44107.11162.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig44107.11162.1
Unique Nameprot_H-paniculata_contig44107.11162.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length45
Homology
BLAST of mRNA_H-paniculata_contig44107.11162.1 vs. uniprot
Match: A0A6H5JY75_9PHAE (Rhomboid domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY75_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 4.600e-12
Identity = 32/45 (71.11%), Postives = 36/45 (80.00%), Query Frame = 0
Query:    1 MLSSFFTCGVVSCIVSLLIMPRNTYSCGASGAIFGLYSVCILGKV 45
            ML SF  CGV S  VSL+IMP+   SCGASGAIFGLYSVC+LGK+
Sbjct:  384 MLMSFVACGVASSFVSLMIMPQTARSCGASGAIFGLYSVCVLGKM 428          
BLAST of mRNA_H-paniculata_contig44107.11162.1 vs. uniprot
Match: A0A7S2UJQ9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJQ9_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.780e-7
Identity = 25/42 (59.52%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    4 SFFTCGVVSCIVSLLIMPRNTYSCGASGAIFGLYSVCILGKV 45
            S+  CGVVS +VSL ++PRNT S GASGA+FGL+SV I  ++
Sbjct:  193 SYIFCGVVSSLVSLAMLPRNTVSLGASGAVFGLFSVSIFSRL 234          
BLAST of mRNA_H-paniculata_contig44107.11162.1 vs. uniprot
Match: A0A7S4QCI9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QCI9_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 1.210e-6
Identity = 23/45 (51.11%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    1 MLSSFFTCGVVSCIVSLLIMPRNTYSCGASGAIFGLYSVCILGKV 45
            +L S+F CGV + + S++I+P+NT S GASGA+FGLY+V  L  +
Sbjct:  200 LLFSYFFCGVFASLASIIILPKNTISIGASGAVFGLYAVSTLATL 244          
BLAST of mRNA_H-paniculata_contig44107.11162.1 vs. uniprot
Match: A0A1E7FJN4_9STRA (Rhomboid-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FJN4_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 1.350e-6
Identity = 24/45 (53.33%), Postives = 35/45 (77.78%), Query Frame = 0
Query:    1 MLSSFFTCGVVSCIVSLLIMPRNTYSCGASGAIFGLYSVCILGKV 45
            +L S+  CGVV+ I SL+++P+ T S GASGA+FGL+SV IL ++
Sbjct:   49 LLFSYLFCGVVANITSLVLLPKYTVSLGASGAVFGLFSVSILSRL 93          
BLAST of mRNA_H-paniculata_contig44107.11162.1 vs. uniprot
Match: A0A0R0GDG3_SOYBN (Rhomboid domain-containing protein n=2 Tax=Glycine subgen. Soja TaxID=1462606 RepID=A0A0R0GDG3_SOYBN)

HSP 1 Score: 46.6 bits (109), Expect = 3.850e-5
Identity = 21/42 (50.00%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    4 SFFTCGVVSCIVSLLIMPRNTYSCGASGAIFGLYSVCILGKV 45
            S+   GV + +VS L++PRNT S GASGA+FGL+++ +L K+
Sbjct:   32 SYILTGVGANLVSWLVLPRNTVSVGASGAVFGLFTISVLVKM 73          
BLAST of mRNA_H-paniculata_contig44107.11162.1 vs. uniprot
Match: C6T841_SOYBN (Rhomboid domain-containing protein n=2 Tax=Glycine subgen. Soja TaxID=1462606 RepID=C6T841_SOYBN)

HSP 1 Score: 47.8 bits (112), Expect = 5.160e-5
Identity = 22/42 (52.38%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    4 SFFTCGVVSCIVSLLIMPRNTYSCGASGAIFGLYSVCILGKV 45
            S+   GV + +VS L++PRNT S GASGA+FGL+S+ +L K+
Sbjct:  169 SYILTGVGANLVSWLVLPRNTVSVGASGAVFGLFSISVLVKM 210          
BLAST of mRNA_H-paniculata_contig44107.11162.1 vs. uniprot
Match: A0A7S2G9J4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G9J4_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 5.180e-5
Identity = 22/45 (48.89%), Postives = 33/45 (73.33%), Query Frame = 0
Query:    1 MLSSFFTCGVVSCIVSLLIMPRNTYSCGASGAIFGLYSVCILGKV 45
            +L +F  CGVV+ + S  I+P NT S GASGA+FGL++V I+ ++
Sbjct:  159 LLVAFLFCGVVANLASHFILPYNTVSLGASGAVFGLFTVSIMNRL 203          
BLAST of mRNA_H-paniculata_contig44107.11162.1 vs. uniprot
Match: A0A0L9UZP6_PHAAN (Rhomboid domain-containing protein n=1 Tax=Phaseolus angularis TaxID=3914 RepID=A0A0L9UZP6_PHAAN)

HSP 1 Score: 46.6 bits (109), Expect = 8.670e-5
Identity = 21/42 (50.00%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    4 SFFTCGVVSCIVSLLIMPRNTYSCGASGAIFGLYSVCILGKV 45
            S+   GV + +VS L++PRNT S GASGA+FGL+++ +L K+
Sbjct:   66 SYILTGVGANLVSWLVLPRNTVSVGASGAVFGLFTISVLVKM 107          
BLAST of mRNA_H-paniculata_contig44107.11162.1 vs. uniprot
Match: A0A371H9J5_MUCPR (Rhomboid-like protein 11, chloroplastic n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371H9J5_MUCPR)

HSP 1 Score: 47.0 bits (110), Expect = 9.720e-5
Identity = 22/42 (52.38%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    4 SFFTCGVVSCIVSLLIMPRNTYSCGASGAIFGLYSVCILGKV 45
            S+   GV + +VS LI+PRNT S GASGA+FGL+++ +L K+
Sbjct:  166 SYILTGVGANLVSWLILPRNTVSVGASGAVFGLFTISVLVKM 207          
BLAST of mRNA_H-paniculata_contig44107.11162.1 vs. uniprot
Match: G7I4B9_MEDTR (Putative rhomboid protease n=1 Tax=Medicago truncatula TaxID=3880 RepID=G7I4B9_MEDTR)

HSP 1 Score: 47.0 bits (110), Expect = 9.770e-5
Identity = 22/42 (52.38%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    4 SFFTCGVVSCIVSLLIMPRNTYSCGASGAIFGLYSVCILGKV 45
            S+   GV + +VS LI+PRNT S GASGA+FGL+++ +L K+
Sbjct:  171 SYILTGVGANLVSWLILPRNTVSVGASGAVFGLFTISVLVKM 212          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig44107.11162.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5JY75_9PHAE4.600e-1271.11Rhomboid domain-containing protein n=2 Tax=Ectocar... [more]
A0A7S2UJQ9_9STRA1.780e-759.52Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S4QCI9_9STRA1.210e-651.11Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1E7FJN4_9STRA1.350e-653.33Rhomboid-domain-containing protein n=1 Tax=Fragila... [more]
A0A0R0GDG3_SOYBN3.850e-550.00Rhomboid domain-containing protein n=2 Tax=Glycine... [more]
C6T841_SOYBN5.160e-552.38Rhomboid domain-containing protein n=2 Tax=Glycine... [more]
A0A7S2G9J4_9STRA5.180e-548.89Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A0L9UZP6_PHAAN8.670e-550.00Rhomboid domain-containing protein n=1 Tax=Phaseol... [more]
A0A371H9J5_MUCPR9.720e-552.38Rhomboid-like protein 11, chloroplastic n=1 Tax=Mu... [more]
G7I4B9_MEDTR9.770e-552.38Putative rhomboid protease n=1 Tax=Medicago trunca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 2..41
e-value: 2.2E-5
score: 24.5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..45
NoneNo IPR availableSUPERFAMILY144091Rhomboid-likecoord: 2..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig44107contigH-paniculata_contig44107:1323..1457 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig44107.11162.1mRNA_H-paniculata_contig44107.11162.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig44107 1320..1457 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig44107.11162.1 ID=prot_H-paniculata_contig44107.11162.1|Name=mRNA_H-paniculata_contig44107.11162.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=45bp
MLSSFFTCGVVSCIVSLLIMPRNTYSCGASGAIFGLYSVCILGKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022764Peptidase_S54_rhomboid_dom