mRNA_H-paniculata_contig4399.11144.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4399.11144.1
Unique NamemRNA_H-paniculata_contig4399.11144.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig4399.11144.1 vs. uniprot
Match: D7G632_ECTSI (Cyclin B1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G632_ECTSI)

HSP 1 Score: 526 bits (1355), Expect = 1.360e-175
Identity = 249/292 (85.27%), Postives = 270/292 (92.47%), Query Frame = 3
Query:  165 RLKRCKIAEPVVTVHDVNDKDDPCACAEYVVDMYKHFKELEEKYTPTVYMHTQMDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLIACKYEEIYPTEVRDCVYITDHAYTREEVLDMEQMILRRLKFQITVPTPWTFLVRFLKVAKATDRQHHRAQYYLERCLQEHDGLSFRPSMLAATSVFLARIPDTGLDDAWSDVLANFCNIPRDGLDCCARLIIKFLLDEPVTASQRHLVAVKKKFMGERFLAVAIDELPKLPAKPNIPAN 1040
            RLKRCK+    V+ HDV D+DDP ACAEY +DMYK +KELEEKYTPTVYMHTQ+DINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCM ENVHRSKLQLVGVTALLIACKYEEI+PTEVRDCVYITDHAYTREEVL+MEQ ILRRLKF++TVPT WTFLVRFLK+AKATDRQHHRAQYYLERCLQEH+ LSFRPSMLAA SVFLARIPD+G+ +AW D LA FCN PR+GL+CCARL+IKFLLDEPVTASQRHLVAVKKKF+GERFLAVAID+LP LP KPNI +N
Sbjct:  199 RLKRCKVPPSEVSEHDVVDRDDPIACAEYAMDMYKRYKELEEKYTPTVYMHTQVDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMQENVHRSKLQLVGVTALLIACKYEEIFPTEVRDCVYITDHAYTREEVLEMEQTILRRLKFELTVPTQWTFLVRFLKIAKATDRQHHRAQYYLERCLQEHEALSFRPSMLAAASVFLARIPDSGIKNAWPDALAKFCNTPREGLECCARLMIKFLLDEPVTASQRHLVAVKKKFLGERFLAVAIDDLPTLPRKPNIASN 490          
BLAST of mRNA_H-paniculata_contig4399.11144.1 vs. uniprot
Match: A0A836CA68_9STRA (Cyclin, N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA68_9STRA)

HSP 1 Score: 335 bits (860), Expect = 2.790e-105
Identity = 161/255 (63.14%), Postives = 201/255 (78.82%), Query Frame = 3
Query:  261 MYKHFKELEEKYTPTVYMHTQMDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLIACKYEEIYPTEVRDCVYITDHAYTREEVLDMEQMILRRLKFQITVPTPWTFLVRFLKVAKATDRQHHRAQYYLERCLQEHDGLSFRPSMLAATSVFLARIPDTGLDDAWSDVLANFCNIPRDGLDCCARLIIKFLLDEPVTASQRHLVAVKKKFMGERFLAVAIDELPKLPAKP 1025
            MY  + +LE  Y PTVYMH Q DIN KMR+ILIDWIVEVH KFKLA PTLYLTC+IIDR+CM+E V R KLQLVGVTALL+ACKYEEI+P EVRDCVYITD+ YTRE++L+ME  ++RRL++Q+TVPT WTFL R L+VA+AT+ Q  RA YY ER LQEHD L+FRPS++AAT+ +L+R+ D     AW  VL  FC +  D L  CA ++  FL  EPVTA+ RHLVA K+KF+ ++FL+V+I+ELP+LP+ P
Sbjct:    1 MYSRYVDLEAMYAPTVYMHMQEDINEKMRSILIDWIVEVHFKFKLATPTLYLTCNIIDRYCMVEAVTRDKLQLVGVTALLVACKYEEIWPPEVRDCVYITDNTYTREQMLEMEMAMVRRLRYQLTVPTAWTFLARVLRVARATETQFQRACYYSERMLQEHDMLAFRPSLVAATATYLSRLVDIEDAHAWPPVLEEFCGLSVDMLMPCAHMMRSFLEAEPVTANHRHLVAAKRKFLQDKFLSVSIEELPQLPSPP 255          
BLAST of mRNA_H-paniculata_contig4399.11144.1 vs. uniprot
Match: A0A7S2GN01_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN01_9STRA)

HSP 1 Score: 282 bits (721), Expect = 1.650e-82
Identity = 142/268 (52.99%), Postives = 185/268 (69.03%), Query Frame = 3
Query:  210 DVNDKDDPCACAEYVVDMYKHFKELEEKYTPTVYMHTQMDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLIACKYEEIYPTEVRDCVYITDHAYTREEVLDMEQMILRRLKFQITVPTPWTFLVRFLKVAKATDRQ--HHRAQYYLERCLQEHDGLSFRPSMLAATSVFLARIPDTGLDDAWSDVLANFCNIPRDGLDCCARLIIKFLLDEPVTASQRHLVAVKKKFMGERFLAVAIDELP 1007
            D  D+D+P A  EY+ ++Y ++K+ E+   P +YMH Q DI  +MR+ILIDW+VEVHLKFKL   TLYL  H+ID+FC   +V R +LQLVG+TALLIACKYEEIYP EVRDCVYITDHAYTREEVL ME  +L+  ++ ITVPT + FL+R+LKV   T ++    RA YY ER LQEHD L ++PS++AA SV+LA   +    D W  V+  +     + +  CAR I  ++ + PVT S+R L AVKKKF  ++FL VA D  P
Sbjct:  173 DEADRDNPLAVVEYIEELYHYYKKAEQIKAPAMYMHRQSDITPRMRSILIDWLVEVHLKFKLVPATLYLCVHLIDQFCSSNDVLRGRLQLVGITALLIACKYEEIYPPEVRDCVYITDHAYTREEVLSMETEMLQHFEYNITVPTGYQFLIRYLKVMGCTPKEAASFRASYYAERSLQEHDMLLYKPSLVAAASVYLALKSER--PDPWGRVIEKYSGYSLEQITPCARQICHYIRENPVTPSRRPLTAVKKKFETQKFLRVAEDPDP 438          
BLAST of mRNA_H-paniculata_contig4399.11144.1 vs. uniprot
Match: A0A7R9W0K7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W0K7_9STRA)

HSP 1 Score: 278 bits (710), Expect = 3.620e-81
Identity = 142/268 (52.99%), Postives = 185/268 (69.03%), Query Frame = 3
Query:  207 HDVNDKDDPCACAEYVVDMYKHFKELEEKYTPTVYMHTQMDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLIACKYEEIYPTEVRDCVYITDHAYTREEVLDMEQMILRRLKFQITVPTPWTFLVRFLKVAKATDRQHHRAQYYLERCLQEHDGLSFRPSMLAATSVFLAR----IPDTGLDDAWSDVLANFCNIPRDGLDCCARLIIKFLLDEPVTASQRHLVAVKKKFMGERFLAVAID 998
            HD +DKD+    A YV D+++HF   E + +P +YM  Q DIN KMRAIL+DW+VEVH+KF+L   TLYL  ++IDR+C L  V RSKLQLVGVTALLIACKYEEIYP EVRDCVYITD AY R+EVLDMEQ +L+RL+F+ITVPT + FL RFL +AK++      A YY ER LQEHD L F+PS++A ++V LA     I + G       +L  +    R  +  CA LI   + +EP+TAS+R LVAVK+K+   ++  V++ 
Sbjct:  137 HDADDKDNILQVAPYVTDIFQHFYRAEARSSPEMYMDHQADINAKMRAILVDWLVEVHMKFRLVPDTLYLCINLIDRYCSLVTVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYNRQEVLDMEQDMLQRLRFKITVPTAYPFLQRFLNMAKSSQLARIAANYYTERTLQEHDLLRFKPSVVAVSAVILALNNPDICEDGDCPGMPKILVEYTGFERSEIIACASLIATKVGEEPITASRRQLVAVKRKYDHRKYQHVSVS 404          
BLAST of mRNA_H-paniculata_contig4399.11144.1 vs. uniprot
Match: A0A7S2XS29_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XS29_9STRA)

HSP 1 Score: 279 bits (714), Expect = 5.090e-81
Identity = 146/280 (52.14%), Postives = 189/280 (67.50%), Query Frame = 3
Query:  198 VTVHDVNDKDDPCACAEYVVDMYKHFKELEEKYTPTVYMHTQMDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLIACKYEEIYPTEVRDCVYITDHAYTREEVLDMEQMILRRLKFQITVPTPWTFLVRFLKVAKATDRQHHRAQYYLERCLQEHDGLSFRPSMLAATSVFLA-------------RIPDTGLDDAWSDVLANFCNIPRDGLDCCARLIIKFLLDEPVTASQRHLVAVKKKFMGERFLAVAID 998
            +  HD+++KDD     EYV D++++   +E K  P  YM  Q DIN KMRAIL+DW+VEVH+KF+L   TLYL  +IIDR+C L N+ RSKLQLVGVTALLIACKYEEIYP EVRDCVYITD AY R+EVLDMEQ IL RL+F+ITVPTP+ FL RFL + KA+      AQYY ER LQE+D L FRPS++ A +V LA                  GLD+    +L  +       +  CA +I + + +EPVTAS+R LVAVK+K+  ++++ V+I+
Sbjct:  189 IAPHDIHNKDDVLEVTEYVTDIFQYLYHVEAKSWPRGYMEKQQDINAKMRAILVDWLVEVHMKFRLNPETLYLCINIIDRYCNLVNIARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYQRQEVLDMEQDILNRLRFKITVPTPYPFLQRFLTLTKASQLTRFAAQYYTERTLQEYDVLKFRPSLVCAAAVILALNNPAIAIKEGIRNYECPGLDN----ILLEYTGFAEADILECAAVIARKVGEEPVTASRRQLVAVKRKYDNKKYMNVSIE 464          
BLAST of mRNA_H-paniculata_contig4399.11144.1 vs. uniprot
Match: A0A6U6KAA6_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6KAA6_9STRA)

HSP 1 Score: 278 bits (710), Expect = 5.520e-80
Identity = 148/284 (52.11%), Postives = 190/284 (66.90%), Query Frame = 3
Query:  198 VTVHDVNDKDDPCACAEYVVDMYKHFKELEEKYTPTVYMHTQMDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLIACKYEEIYPTEVRDCVYITDHAYTREEVLDMEQMILRRLKFQITVPTPWTFLVRFLKVAKATDRQHHRAQYYLERCLQEHDGLSFRPSMLAATSVFLA-RIPDTGLDD---AWSDVLANFCNIPRDGLDCCARLIIKFLLDEPVTASQRHLVAVKKKFMGERFLAVAIDELPKLPAKPNIPA 1037
            +  HD ND+ +    A YV D+++HF + E K  P +YM  Q DIN KMRAIL+DW+VEVH+KF+L   TLYL  ++IDR+C   +V RSKLQLVGVTALLIACKYEEIYP EVRDCVYITD AY R+EVLDMEQ IL+RL+F+ITVPT + FL+RFL + KA+      A YY+ER LQEHD L F+PS++AA++V LA   PD   D        VL  +       L  CA +I   + +EPVTAS+R LVAVK+K+   ++  V+         +PN+ A
Sbjct:  229 IAPHDTNDRGNTLQVAPYVTDIFQHFFQAEAKSCPEMYMDQQADINAKMRAILVDWLVEVHMKFRLVPDTLYLCINLIDRYCSHVSVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYNRQEVLDMEQDILQRLRFKITVPTAYPFLLRFLNMTKASQLSRIAANYYMERTLQEHDLLKFKPSVVAASAVVLALNNPDISDDHDCPGMPTVLMEYTGFQPSELMACAAIIATKVGEEPVTASRRQLVAVKRKYDHRKYQHVSTTV-----RQPNVDA 507          
BLAST of mRNA_H-paniculata_contig4399.11144.1 vs. uniprot
Match: A0A7S1ZPT4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZPT4_TRICV)

HSP 1 Score: 270 bits (690), Expect = 1.470e-77
Identity = 144/271 (53.14%), Postives = 183/271 (67.53%), Query Frame = 3
Query:  198 VTVHDVNDKDDPCACAEYVVDMYKHFKELEEKYTPTVYMHTQMDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLIACKYEEIYPTEVRDCVYITDHAYTREEVLDMEQMILRRLKFQITVPTPWTFLVRFLKVAKATDRQHHRAQYYLERCLQEHDGLSFRPSMLAATSVFLAR----IP-DTG-LDDAWSDVLANFCNIPRDGLDCCARLIIKFLLDEPVTASQRHLVAVKKKFMGERFLAVA 992
            +  HD  DK++      YV D+++H    E +  P +YMH Q DIN KMRAIL+DW+VEVH+KF L   TLYL  +IIDR+C   +V RSKLQLVGVTALLIACKYEEIYP EVRDCVYITD AY R+EVLDMEQ +L+RL+F+ITVPT + FL RFL + KA       A YY+ER LQEHD L ++PS++AA+ V LA     IP DT  L+     +L  +       L  CA+LI   + ++PVTAS+R LVAVK+K+   +F  V+
Sbjct:  188 IAPHDACDKENVLKVVPYVTDIFQHLYRAEARSCPEIYMHNQADINAKMRAILVDWLVEVHMKFHLVPETLYLCINIIDRYCSQVSVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYNRQEVLDMEQDMLQRLRFKITVPTAYPFLQRFLSLTKAPQLAQFAANYYMERTLQEHDLLQYKPSVVAASCVILALSNPDIPADTETLNPGMPRILLEYTGFEEKVLLSCAKLIATKVGEDPVTASKRQLVAVKRKYGHGKFRHVS 458          
BLAST of mRNA_H-paniculata_contig4399.11144.1 vs. uniprot
Match: A0A6V2B684_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2B684_9STRA)

HSP 1 Score: 270 bits (691), Expect = 5.170e-77
Identity = 143/290 (49.31%), Postives = 192/290 (66.21%), Query Frame = 3
Query:  198 VTVHDVNDKDDPCACAEYVVDMYKHFKELEEKYTPTVYMHTQMDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLIACKYEEIYPTEVRDCVYITDHAYTREEVLDMEQMILRRLKFQITVPTPWTFLVRFLKVAKATDRQHHRAQYYLERCLQEHDGLSFRPSMLAATSVFLA-RIPDTGLDDAWSD--------VLANFCNIPRDGLDCCARLIIKFLLDEPVTASQRHLVAVKKKFMGERFLAVAIDELPKLPAKPNIPAN 1040
            +  HD +D D+P   ++YV D+++H    E +  P +YM  Q DIN KMRAIL+DW+VEVH+KF+L   TLYL  +IIDR+C    V RSKLQLVGVTALLIACKYEEIYP EVRDCVYITD AY ++EVLDMEQ +L RL+F+ITVPT + F++RFL + KA+    + A YY+ER LQEHD L  RPS++ A SV LA   PD    ++ S+        +L  +    +  +  CA +I + + +EPVTAS+R LVAVK+K+   ++  V+ +     P+  NI  N
Sbjct:  246 IAKHDEDDADEPLLVSDYVTDIFQHLFNAETRSRPRMYMDKQRDINAKMRAILVDWLVEVHMKFRLVPETLYLCVNIIDRYCNQVPVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYHKQEVLDMEQDMLHRLRFKITVPTAYPFILRFLNITKASSVARYAAHYYMERTLQEHDLLLHRPSLVCAASVVLALNNPDIIAKESTSNRERPGVPKILLEYTGFSKSDILECAAVIARKVGEEPVTASRRQLVAVKRKYDNRKYFHVSSNFAQ--PSVQNICPN 533          
BLAST of mRNA_H-paniculata_contig4399.11144.1 vs. uniprot
Match: A0A6U6K965_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6K965_9STRA)

HSP 1 Score: 253 bits (646), Expect = 6.630e-74
Identity = 137/255 (53.73%), Postives = 173/255 (67.84%), Query Frame = 3
Query:  285 EEKYTPTVYMHTQMDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLIACKYEEIYPTEVRDCVYITDHAYTREEVLDMEQMILRRLKFQITVPTPWTFLVRFLKVAKATDRQHHRAQYYLERCLQEHDGLSFRPSMLAATSVFLA-RIPDTGLDD---AWSDVLANFCNIPRDGLDCCARLIIKFLLDEPVTASQRHLVAVKKKFMGERFLAVAIDELPKLPAKPNIPA 1037
            + K  P +YM  Q DIN KMRAIL+DW+VEVH+KF+L   TLYL  ++IDR+C   +V RSKLQLVGVTALLIACKYEEIYP EVRDCVYITD AY R+EVLDMEQ IL+RL+F+ITVPT + FL+RFL + KA+      A YY+ER LQEHD L F+PS++AA++V LA   PD   D        VL  +       L  CA +I   + +EPVTAS+R LVAVK+K+   ++  V+         +PN+ A
Sbjct:   17 QAKSCPEMYMDQQADINAKMRAILVDWLVEVHMKFRLVPDTLYLCINLIDRYCSHVSVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYNRQEVLDMEQDILQRLRFKITVPTAYPFLLRFLNMTKASQLSRIAANYYMERTLQEHDLLKFKPSVVAASAVVLALNNPDISDDHDCPGMPTVLMEYTGFQPSELMACAAIIATKVGEEPVTASRRQLVAVKRKYDHRKYQHVSTTV-----RQPNVDA 266          
BLAST of mRNA_H-paniculata_contig4399.11144.1 vs. uniprot
Match: A0A7S2PQG9_9STRA (G2/mitotic-specific cyclin-B3 n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PQG9_9STRA)

HSP 1 Score: 260 bits (664), Expect = 1.050e-73
Identity = 137/279 (49.10%), Postives = 185/279 (66.31%), Query Frame = 3
Query:  207 HDVNDKDDPCACAEYVVDMYKHFKELEEKYTPTVYMHTQMDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLIACKYEEIYPTEVRDCVYITDHAYTREEVLDMEQMILRRLKFQITVPTPWTFLVRFLKVAKATDRQHHRAQYYLERCLQEHDGLSFRPSMLAATSVFLA------RIPDTGLD---DAWSDVLANFCNIPRDGLDCCARLIIKFLLDEPVTASQRHLVAVKKKFMGERFLAVAID-ELPKL 1013
            +D   + DP   AEY+ D+++H  + E +Y    YM  Q DIN +MRAILIDW+VEVH+KF+L   TLYL   IIDR+C   +V RSKLQL+GVTALL+ACK+EEIYP EVRDCVYITD AY R+EVLDMEQ IL+ L ++I+VPT + FL RFL ++ A++   H A YYLER LQEH  L FRPS++ A++V LA      R+ +  LD     +  +L  +       L  C   + + + +EP+TAS+R L AVKKK+   ++L V+ + ELP +
Sbjct:  208 YDAARRSDPQKVAEYITDLFQHLYKAETRYKVAPYMFRQEDINARMRAILIDWLVEVHMKFRLVPETLYLCVSIIDRYCCKVDVLRSKLQLIGVTALLVACKHEEIYPPEVRDCVYITDRAYNRQEVLDMEQEILKVLDWKISVPTAFPFLDRFLCLSDASEMTKHAAAYYLERTLQEHSFLQFRPSVVCASAVILALNNPDIRVQEEDLDRELPGFPKILMEYTGFSEFELTTCMERMAEKVGEEPITASRRQLNAVKKKYENSKYLEVSTNVELPNV 486          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4399.11144.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G632_ECTSI1.360e-17585.27Cyclin B1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6... [more]
A0A836CA68_9STRA2.790e-10563.14Cyclin, N-terminal domain-containing protein n=1 T... [more]
A0A7S2GN01_9STRA1.650e-8252.99Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7R9W0K7_9STRA3.620e-8152.99Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2XS29_9STRA5.090e-8152.14Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6U6KAA6_9STRA5.520e-8052.11Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S1ZPT4_TRICV1.470e-7753.14Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6V2B684_9STRA5.170e-7749.31Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
A0A6U6K965_9STRA6.630e-7453.73Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2PQG9_9STRA1.050e-7349.10G2/mitotic-specific cyclin-B3 n=1 Tax=Skeletonema ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4399contigH-paniculata_contig4399:5430..9974 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score483.0
Seed ortholog evalue8.6e-134
Seed eggNOG ortholog2880.D7G632
KEGG koko:K21770,ko:K21777
KEGG TC1.I.1.1.3
KEGG Pathwayko04068,ko04110,ko04114,ko04115,ko04218,ko04914,ko05166,map04068,map04110,map04114,map04115,map04218,map04914,map05166
Hectar predicted targeting categoryother localisation
EggNOG free text desc.cell division
EggNOG OGsCOG5024@1,KOG0653@2759
Ec32 ortholog descriptionCyclin B1
Ec32 orthologEc-11_004920.1
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03032,ko03036
Exons3
Model size2702
Cds size783
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4399.11144.1prot_H-paniculata_contig4399.11144.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4399 5690..8315 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930328.2464037-UTR-H-paniculata_contig4399:5429..56891622930328.2464037-UTR-H-paniculata_contig4399:5429..5689Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4399 5430..5689 +
1691481243.5832531-UTR-H-paniculata_contig4399:5429..56891691481243.5832531-UTR-H-paniculata_contig4399:5429..5689Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4399 5430..5689 +
1622930328.3298528-UTR-H-paniculata_contig4399:8315..99741622930328.3298528-UTR-H-paniculata_contig4399:8315..9974Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4399 8316..9974 +
1691481243.6392376-UTR-H-paniculata_contig4399:8315..99741691481243.6392376-UTR-H-paniculata_contig4399:8315..9974Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4399 8316..9974 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930328.26732-CDS-H-paniculata_contig4399:5689..57161622930328.26732-CDS-H-paniculata_contig4399:5689..5716Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4399 5690..5716 +
1691481243.6041343-CDS-H-paniculata_contig4399:5689..57161691481243.6041343-CDS-H-paniculata_contig4399:5689..5716Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4399 5690..5716 +
1622930328.2943163-CDS-H-paniculata_contig4399:7040..75831622930328.2943163-CDS-H-paniculata_contig4399:7040..7583Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4399 7041..7583 +
1691481243.6135-CDS-H-paniculata_contig4399:7040..75831691481243.6135-CDS-H-paniculata_contig4399:7040..7583Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4399 7041..7583 +
1622930328.3108125-CDS-H-paniculata_contig4399:8102..83151622930328.3108125-CDS-H-paniculata_contig4399:8102..8315Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4399 8103..8315 +
1691481243.6283863-CDS-H-paniculata_contig4399:8102..83151691481243.6283863-CDS-H-paniculata_contig4399:8102..8315Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4399 8103..8315 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4399.11144.1

>prot_H-paniculata_contig4399.11144.1 ID=prot_H-paniculata_contig4399.11144.1|Name=mRNA_H-paniculata_contig4399.11144.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=261bp
MYKHFKELEEKYTPTVYMHTQMDINCKMRAILIDWIVEVHLKFKLADPTL
YLTCHIIDRFCMLENVHRSKLQLVGVTALLIACKYEEIYPTEVRDCVYIT
DHAYTREEVLDMEQMILRRLKFQITVPTPWTFLVRFLKVAKATDRQHHRA
QYYLERCLQEHDGLSFRPSMLAATSVFLARIPDTGLDDAWSDVLANFCNI
PRDGLDCCARLIIKFLLDEPVTASQRHLVAVKKKFMGERFLAVAIDELPK
LPAKPNIPAN*
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mRNA from alignment at H-paniculata_contig4399:5430..9974+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4399.11144.1 ID=mRNA_H-paniculata_contig4399.11144.1|Name=mRNA_H-paniculata_contig4399.11144.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4545bp|location=Sequence derived from alignment at H-paniculata_contig4399:5430..9974+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACAAGAATCAAGCCACTAAGCCGGCTGCACAGCCCAGCAGAAGCCAGAGG GAAGAGCAGCAACAGCAACAGCAGAGCACAAAGGACGCGCCAATCGGTCG CCGCACCTTACGCGAGGAAGCGCATCACGAAGCGAGCAAAAAACTCGCAC TAAAAACGTTGGAGAGGCTGAAGCGGTGCAAAATTGCGGAGCCTGTCGTG ACAGTGCACGATGTGAATGATAAAGACGACCCCTGCGCGTGCGCCGAGTA CGTTGTCGACATGTACAAGCACTTTAAGGAGTTGGAGGTGAGTCTTGAGA TCGAGTGTAATGTGTCAGTTTCCCGCTTTGCTTTGTCCATCTTGAGAATC GTCCTCCTGTAGGTGTCTTTTGTCCGACCCAGAGGAAATACGAAAATTGG TCATTTTTGAAAAAAAAAAAGGGGGGGGGAACGGCAGCGGATGCATGACC TGTGTCCTTGACTGGCATAACGTCGTGCTTTTCAAAACAGGCTCTAACTG ACTACTTGGGGGTGCAATTTCGCTCCCACGCATCGCGTGTATGAGTTTGG TGTTTTAACGGCTGAGCCTGTACTCCTCAGCGCGCGACTTGTCTGCTCTA AGGATTCAAATTGAAGCAAATTTGCTGATGTACAAGATTCGCCCTTCATT CTCGGGGTCTTTCTTCTCAACTACAACAGTCAGTATTGTATTAAATATCT ATTCACTGACCTCAATTCATGGTTGTGATTGAGACTCGGAACATGTGACA CGTTTCGAAGGCCGAAGGCGCATCGTTGGCTTTCTGGCACGAATGGAAGT ACATGGTGAAAAGCGGTGGGGGCAGCAGAGACATTAACTTGTCAGCTTTG GCCTGATGTGCAGTATCACTGTCCAAATTTTGACTTCTTGAACATGCGCT GAAAATTGAAACGAGGCACTAGCAGTCGACGAGATAGCTTTAGCCTACAC CGTAAAGGGGTGTGATACAGTGTAGTAGGTCATGGTGCTTGAGTTGGGAC ACTCTGCTTTCCGCTGTCTACACCATGTTAAATGGTGGATTACACTCTCG CCTTGAAGGGCTTGACAAGAAATCTGCCGGCATTTTGTGTCCCGACTGCG TCAATTCACTCTAAAAAAACACCATGTGGGGTAGGTACTACCCAGCAGGA AGTACGCGTCCCTACTGAGGCGTCAGACCACGACACCTGCATCGATTCAT GGTTGCTCTCAAGTAGGTAACCAACTTCCAAATTTTTGAAAACAGTTTTG AAATCCGAGATGTTTGGGCGGGGCAGAAACTGATAGACTGTACCATTTTC ATAACATAGGTACCTAGAGGTGGTCATCCGCCAAAAGGACAGACCATGAG CCGCACGTCTATCAATGTTCACTCTGGCCTTGGATGAACTTACCCGGTTG TGTTCATTTCCATTCTCCTCCACAGTTCAGTGCATCTAATATATCGGTCA TGTCTGTGCCCGAGGCAACATGATGCTTATGCTAGAACACTTTAAACTCC TGTACTGTAGTCGTTCTCACCGCTCCCATTGCTCCCCCCTACTGCCCTGC TCTGCTGTGCCTTTTGCGGAAAACCAAAAACTCGGCCACGGAATACTAAC GAACCATACAGGAAAAGTACACTCCAACGGTGTACATGCACACGCAAATG GATATAAACTGCAAGATGCGCGCGATCCTGATCGACTGGATTGTGGAGGT CCACCTTAAATTCAAGCTCGCGGATCCGACGCTGTACCTGACATGCCATA TCATAGACCGCTTCTGCATGCTGGAGAACGTGCACCGCAGCAAGCTTCAG TTGGTGGGCGTCACGGCCCTTCTCATCGCCTGCAAGTATGAAGAGATTTA CCCCACGGAGGTGCGGGATTGCGTATACATCACTGACCACGCCTACACGC GAGAGGAGGTGCTGGATATGGAACAGATGATCCTGCGCCGGCTCAAGTTC CAGATCACCGTACCCACCCCGTGGACCTTCCTCGTGCGATTCCTGAAGGT GGCCAAAGCCACGGACCGACAGCATCACCGCGCGCAGTATTACCTGGAGC GGTGCCTGCAAGAGCATGACGGACTGTCGTTTCGACCATCCATGCTCGCG GCCACATCAGTGTTCCTGGCAAGGATTCCGGATACCGGGCTCGATGATGC ATGGGTGAGTACAAGTTGAATAGATATGTCACTTTTCAGAAATTTTTCAA GGTTATGGAATATTCTTGCGAGGGTCGAGCACATGTTCGAGTTCTATAGG ATGTTTTAATTATACTATACTACTTGTATAAAAGTAATTTTTAAAAGTTA ATTTTCATATTTTAAATGCCACAATTTGATATTTTAAGTTTTTCGAATCA AACCTTGTGGTTTTTTATTCTTTTTATTGTTCGATTATAAGTATAAATAT ATCCAATTGAAGTAAAAAGTTAAATGTTGGTGAGTTCAAGTTCGGCCCCG CTTGATGCTGTGCTTATACCCACAACTGCATTATTGTGGAAAGTTCGACA ATTCACAACTAGGGACGGTATAACCTGCGATTGTTCTGTCACACAACCGA GACAGGACTTTAACCTGAAGGCCTTGACCCTTCCCACCCTCCCCTCCGCG TGCCGCCCCCCGACACATGACCCTCTTATATCTTCGTGCTTGCATCGCAT CGCGCCTCTGTACGATTTCGCAGTCTGATGTTCTGGCAAATTTTTGCAAT ATCCCACGGGATGGACTCGATTGCTGCGCGCGCCTGATCATCAAGTTCCT GCTCGACGAGCCCGTCACCGCGTCCCAGCGACACCTGGTTGCCGTCAAAA AGAAGTTTATGGGAGAGCGCTTTCTGGCGGTTGCTATTGACGAGTTGCCG AAGCTGCCTGCGAAACCGAACATTCCCGCCAATTGAACAGTTTTGGGTTA TATGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTATGACGGGGCAGGGGGG AAGCAGAGGACGACGTCCGACAGAAGAGCCCCAATGCTGGGTGACTACCG CTACTACGGCTATGGCTACTGCTGCGAGACACTGGCTGTGATGGCAACTG ATGACGAGAAACCAAGGCGAAAAACAAGCGTCGTTTTTGTTGTTGCAGAG ATTCACTGCGTTCTGATGGGAAGACAAAGGGAGGGGACACCAGTGTTGGA ATGAAGAAAAAAATGACTATAAATGGCTTTCGTTTGTCGGTAAACTGGGG AACGCGAAGGCTGGGATGGGGGGACGGGGGATACGAGGGTCTGTGCGCGC GTTAGGCACGTGCGCACCAATTCTCCATCGGGGAAAATTGTCGCTGAAAC GGTGAGGGCCTTGGACAGAACTTTCAGGGCAAGCCAAGTTGGTTATGAGT GATGTGACCGCAGTTAATCTTCGTTGCTGTGATCTTGATTTACGGGGTAA TCTAGTGAGCAAGAGGTACGAGTTTCCTCAACAATCAACTTTGTTGTCAA CGGCGAATAAGTTGCGAATGCCCTACTGTGTTAGTTTTTGCAGCCTGTCA CCTTGGCCCTCATGGAGGGGAGCTCAAGGCATTGACATGCGGAAAACGGG GCGGAGGGCGGGGAGGGAAGCATGGTGACATAACAAAAATGTGTGATGGT TCTGTACTGTTATTGCCGGTGAGAGGAGTGACCTTAGAGGTGCCCGCTTC ACCGCACGTTGAATTTTTTGTGAGTTTTTTTGTGTAGAGGTCTGCGAGGT TTTAGGAATTTTACTGTGATAGGACTTAGTTGTGGTGGGGGGAACACACG GGTACATTTTTTTTTTTTTTCATTTGCACATTTTGTGTTGTGCGTTGCCC TTGTTTCTTTGTTGGCATTTTTCCGTTCTCACGTGATGAATGTGTTTCTC TCGTATGGCTATTTGTTCGCTGTCCGCCAGGCCGAGACCAAGCACAGTGA GTTTCACCTTGTTCCAAAGTTTTGCAGTGATCAAGATTAGTCCCGGATAC GAGATATCTTCTACGTCGCAAGACGTCAAGAGGACTGTAGAAGTGGGCGA CCATGTTCCGCGGAGAAAGTCAGCGTAATTTTCAGTTTCGTTTTCATCCC GGGGTTATAACCCTCCCCCCCCCCTTGACTGGTATGTGTCACAACGTGTG CGCGAGAAGATGCTTGTCAAGAAAAGTTCGGCGCTGTTATTGTCTTCCCT GGTCCTTAGTGCTGGTATCAACCGATTCGATTTTGAATATGTGGGGCATG AAGGAAAGTCGAGAAAAAAAGGTGAAGTGAGTGAGGAAGGGCGATTTGTC CTCTTCCCCACTCCTACGTGTCTATGCTAATATGATCGAAATGTTTGCCT TCGATTTTTCTACTCCATCAGCATCTTCATCAAACGGAAGTTGTATGACT CTTCCTTAAACAGTAGTGTACATAGAAGAATACATACATTCTACCCTGTG CGTATATATATTCGATGGGCAAAATCTGTGGCAATCAAGGCGTAGAAGGA GAATGTTCAAGCTAGTTATTTCAAAGCGAAAAAAAATGGTGGCCAAGACA CACGTGACAATATAGTCAAGGTGGCGAACTGTTTAATTTGATATT
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Coding sequence (CDS) from alignment at H-paniculata_contig4399:5430..9974+

>mRNA_H-paniculata_contig4399.11144.1 ID=mRNA_H-paniculata_contig4399.11144.1|Name=mRNA_H-paniculata_contig4399.11144.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1566bp|location=Sequence derived from alignment at H-paniculata_contig4399:5430..9974+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTACAAGCACTTTAAGGAGTTGGAGATGTACAAGCACTTTAAGGAGTT
GGAGGAAAAGTACACTCCAACGGTGTACATGCACACGCAAATGGATATAA
ACTGCAAGATGCGCGCGATCCTGATCGACTGGATTGTGGAGGTCCACCTT
AAATTCAAGCTCGCGGATCCGACGCTGTACCTGACATGCCATATCATAGA
CCGCTTCTGCATGCTGGAGAACGTGCACCGCAGCAAGCTTCAGTTGGTGG
GCGTCACGGCCCTTCTCATCGCCTGCAAGTATGAAGAGATTTACCCCACG
GAGGTGCGGGATTGCGTATACATCACTGACCACGCCTACACGCGAGAGGA
GGTGCTGGATATGGAACAGATGATCCTGCGCCGGCTCAAGTTCCAGATCA
CCGTACCCACCCCGTGGACCTTCCTCGTGCGATTCCTGAAGGTGGCCAAA
GCCACGGACCGACAGCATCACCGCGCGCAGTATTACCTGGAGCGGTGCCT
GCAAGAGCATGACGGACTGTCGTTTCGACCATCCATGCTCGCGGCCACAT
CAGTGTTCCTGGCAAGGATTCCGGATACCGGGCTCGATGATGCATGGGAA
AAGTACACTCCAACGGTGTACATGCACACGCAAATGGATATAAACTGCAA
GATGCGCGCGATCCTGATCGACTGGATTGTGGAGGTCCACCTTAAATTCA
AGCTCGCGGATCCGACGCTGTACCTGACATGCCATATCATAGACCGCTTC
TGCATGCTGGAGAACGTGCACCGCAGCAAGCTTCAGTTGGTGGGCGTCAC
GGCCCTTCTCATCGCCTGCAAGTATGAAGAGATTTACCCCACGGAGGTGC
GGGATTGCGTATACATCACTGACCACGCCTACACGCGAGAGGAGGTGCTG
GATATGGAACAGATGATCCTGCGCCGGCTCAAGTTCCAGATCACCGTACC
CACCCCGTGGACCTTCCTCGTGCGATTCCTGAAGGTGGCCAAAGCCACGG
ACCGACAGCATCACCGCGCGCAGTATTACCTGGAGCGGTGCCTGCAAGAG
CATGACGGACTGTCGTTTCGACCATCCATGCTCGCGGCCACATCAGTGTT
CCTGGCAAGGATTCCGGATACCGGGCTCGATGATGCATGGTCTGATGTTC
TGGCAAATTTTTGCAATATCCCACGGGATGGACTCGATTGCTGCGCGCGC
CTGATCATCAAGTTCCTGCTCGACGAGCCCGTCACCGCGTCCCAGCGACA
CCTGGTTGCCGTCAAAAAGAAGTTTATGGGAGAGCGCTTTCTGGCGGTTG
CTATTGACGAGTTGCCGAAGCTGCCTGCGAAACCGAACATTCCCGCCAAT
TGATCTGATGTTCTGGCAAATTTTTGCAATATCCCACGGGATGGACTCGA
TTGCTGCGCGCGCCTGATCATCAAGTTCCTGCTCGACGAGCCCGTCACCG
CGTCCCAGCGACACCTGGTTGCCGTCAAAAAGAAGTTTATGGGAGAGCGC
TTTCTGGCGGTTGCTATTGACGAGTTGCCGAAGCTGCCTGCGAAACCGAA
CATTCCCGCCAATTGA
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