mRNA_H-paniculata_contig4399.11144.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4399.11144.1 vs. uniprot
Match: D7G632_ECTSI (Cyclin B1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G632_ECTSI) HSP 1 Score: 526 bits (1355), Expect = 1.360e-175 Identity = 249/292 (85.27%), Postives = 270/292 (92.47%), Query Frame = 3
Query: 165 RLKRCKIAEPVVTVHDVNDKDDPCACAEYVVDMYKHFKELEEKYTPTVYMHTQMDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLIACKYEEIYPTEVRDCVYITDHAYTREEVLDMEQMILRRLKFQITVPTPWTFLVRFLKVAKATDRQHHRAQYYLERCLQEHDGLSFRPSMLAATSVFLARIPDTGLDDAWSDVLANFCNIPRDGLDCCARLIIKFLLDEPVTASQRHLVAVKKKFMGERFLAVAIDELPKLPAKPNIPAN 1040
RLKRCK+ V+ HDV D+DDP ACAEY +DMYK +KELEEKYTPTVYMHTQ+DINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCM ENVHRSKLQLVGVTALLIACKYEEI+PTEVRDCVYITDHAYTREEVL+MEQ ILRRLKF++TVPT WTFLVRFLK+AKATDRQHHRAQYYLERCLQEH+ LSFRPSMLAA SVFLARIPD+G+ +AW D LA FCN PR+GL+CCARL+IKFLLDEPVTASQRHLVAVKKKF+GERFLAVAID+LP LP KPNI +N
Sbjct: 199 RLKRCKVPPSEVSEHDVVDRDDPIACAEYAMDMYKRYKELEEKYTPTVYMHTQVDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMQENVHRSKLQLVGVTALLIACKYEEIFPTEVRDCVYITDHAYTREEVLEMEQTILRRLKFELTVPTQWTFLVRFLKIAKATDRQHHRAQYYLERCLQEHEALSFRPSMLAAASVFLARIPDSGIKNAWPDALAKFCNTPREGLECCARLMIKFLLDEPVTASQRHLVAVKKKFLGERFLAVAIDDLPTLPRKPNIASN 490
BLAST of mRNA_H-paniculata_contig4399.11144.1 vs. uniprot
Match: A0A836CA68_9STRA (Cyclin, N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA68_9STRA) HSP 1 Score: 335 bits (860), Expect = 2.790e-105 Identity = 161/255 (63.14%), Postives = 201/255 (78.82%), Query Frame = 3
Query: 261 MYKHFKELEEKYTPTVYMHTQMDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLIACKYEEIYPTEVRDCVYITDHAYTREEVLDMEQMILRRLKFQITVPTPWTFLVRFLKVAKATDRQHHRAQYYLERCLQEHDGLSFRPSMLAATSVFLARIPDTGLDDAWSDVLANFCNIPRDGLDCCARLIIKFLLDEPVTASQRHLVAVKKKFMGERFLAVAIDELPKLPAKP 1025
MY + +LE Y PTVYMH Q DIN KMR+ILIDWIVEVH KFKLA PTLYLTC+IIDR+CM+E V R KLQLVGVTALL+ACKYEEI+P EVRDCVYITD+ YTRE++L+ME ++RRL++Q+TVPT WTFL R L+VA+AT+ Q RA YY ER LQEHD L+FRPS++AAT+ +L+R+ D AW VL FC + D L CA ++ FL EPVTA+ RHLVA K+KF+ ++FL+V+I+ELP+LP+ P
Sbjct: 1 MYSRYVDLEAMYAPTVYMHMQEDINEKMRSILIDWIVEVHFKFKLATPTLYLTCNIIDRYCMVEAVTRDKLQLVGVTALLVACKYEEIWPPEVRDCVYITDNTYTREQMLEMEMAMVRRLRYQLTVPTAWTFLARVLRVARATETQFQRACYYSERMLQEHDMLAFRPSLVAATATYLSRLVDIEDAHAWPPVLEEFCGLSVDMLMPCAHMMRSFLEAEPVTANHRHLVAAKRKFLQDKFLSVSIEELPQLPSPP 255
BLAST of mRNA_H-paniculata_contig4399.11144.1 vs. uniprot
Match: A0A7S2GN01_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN01_9STRA) HSP 1 Score: 282 bits (721), Expect = 1.650e-82 Identity = 142/268 (52.99%), Postives = 185/268 (69.03%), Query Frame = 3
Query: 210 DVNDKDDPCACAEYVVDMYKHFKELEEKYTPTVYMHTQMDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLIACKYEEIYPTEVRDCVYITDHAYTREEVLDMEQMILRRLKFQITVPTPWTFLVRFLKVAKATDRQ--HHRAQYYLERCLQEHDGLSFRPSMLAATSVFLARIPDTGLDDAWSDVLANFCNIPRDGLDCCARLIIKFLLDEPVTASQRHLVAVKKKFMGERFLAVAIDELP 1007
D D+D+P A EY+ ++Y ++K+ E+ P +YMH Q DI +MR+ILIDW+VEVHLKFKL TLYL H+ID+FC +V R +LQLVG+TALLIACKYEEIYP EVRDCVYITDHAYTREEVL ME +L+ ++ ITVPT + FL+R+LKV T ++ RA YY ER LQEHD L ++PS++AA SV+LA + D W V+ + + + CAR I ++ + PVT S+R L AVKKKF ++FL VA D P
Sbjct: 173 DEADRDNPLAVVEYIEELYHYYKKAEQIKAPAMYMHRQSDITPRMRSILIDWLVEVHLKFKLVPATLYLCVHLIDQFCSSNDVLRGRLQLVGITALLIACKYEEIYPPEVRDCVYITDHAYTREEVLSMETEMLQHFEYNITVPTGYQFLIRYLKVMGCTPKEAASFRASYYAERSLQEHDMLLYKPSLVAAASVYLALKSER--PDPWGRVIEKYSGYSLEQITPCARQICHYIRENPVTPSRRPLTAVKKKFETQKFLRVAEDPDP 438
BLAST of mRNA_H-paniculata_contig4399.11144.1 vs. uniprot
Match: A0A7R9W0K7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W0K7_9STRA) HSP 1 Score: 278 bits (710), Expect = 3.620e-81 Identity = 142/268 (52.99%), Postives = 185/268 (69.03%), Query Frame = 3
Query: 207 HDVNDKDDPCACAEYVVDMYKHFKELEEKYTPTVYMHTQMDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLIACKYEEIYPTEVRDCVYITDHAYTREEVLDMEQMILRRLKFQITVPTPWTFLVRFLKVAKATDRQHHRAQYYLERCLQEHDGLSFRPSMLAATSVFLAR----IPDTGLDDAWSDVLANFCNIPRDGLDCCARLIIKFLLDEPVTASQRHLVAVKKKFMGERFLAVAID 998
HD +DKD+ A YV D+++HF E + +P +YM Q DIN KMRAIL+DW+VEVH+KF+L TLYL ++IDR+C L V RSKLQLVGVTALLIACKYEEIYP EVRDCVYITD AY R+EVLDMEQ +L+RL+F+ITVPT + FL RFL +AK++ A YY ER LQEHD L F+PS++A ++V LA I + G +L + R + CA LI + +EP+TAS+R LVAVK+K+ ++ V++
Sbjct: 137 HDADDKDNILQVAPYVTDIFQHFYRAEARSSPEMYMDHQADINAKMRAILVDWLVEVHMKFRLVPDTLYLCINLIDRYCSLVTVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYNRQEVLDMEQDMLQRLRFKITVPTAYPFLQRFLNMAKSSQLARIAANYYTERTLQEHDLLRFKPSVVAVSAVILALNNPDICEDGDCPGMPKILVEYTGFERSEIIACASLIATKVGEEPITASRRQLVAVKRKYDHRKYQHVSVS 404
BLAST of mRNA_H-paniculata_contig4399.11144.1 vs. uniprot
Match: A0A7S2XS29_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XS29_9STRA) HSP 1 Score: 279 bits (714), Expect = 5.090e-81 Identity = 146/280 (52.14%), Postives = 189/280 (67.50%), Query Frame = 3
Query: 198 VTVHDVNDKDDPCACAEYVVDMYKHFKELEEKYTPTVYMHTQMDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLIACKYEEIYPTEVRDCVYITDHAYTREEVLDMEQMILRRLKFQITVPTPWTFLVRFLKVAKATDRQHHRAQYYLERCLQEHDGLSFRPSMLAATSVFLA-------------RIPDTGLDDAWSDVLANFCNIPRDGLDCCARLIIKFLLDEPVTASQRHLVAVKKKFMGERFLAVAID 998
+ HD+++KDD EYV D++++ +E K P YM Q DIN KMRAIL+DW+VEVH+KF+L TLYL +IIDR+C L N+ RSKLQLVGVTALLIACKYEEIYP EVRDCVYITD AY R+EVLDMEQ IL RL+F+ITVPTP+ FL RFL + KA+ AQYY ER LQE+D L FRPS++ A +V LA GLD+ +L + + CA +I + + +EPVTAS+R LVAVK+K+ ++++ V+I+
Sbjct: 189 IAPHDIHNKDDVLEVTEYVTDIFQYLYHVEAKSWPRGYMEKQQDINAKMRAILVDWLVEVHMKFRLNPETLYLCINIIDRYCNLVNIARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYQRQEVLDMEQDILNRLRFKITVPTPYPFLQRFLTLTKASQLTRFAAQYYTERTLQEYDVLKFRPSLVCAAAVILALNNPAIAIKEGIRNYECPGLDN----ILLEYTGFAEADILECAAVIARKVGEEPVTASRRQLVAVKRKYDNKKYMNVSIE 464
BLAST of mRNA_H-paniculata_contig4399.11144.1 vs. uniprot
Match: A0A6U6KAA6_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6KAA6_9STRA) HSP 1 Score: 278 bits (710), Expect = 5.520e-80 Identity = 148/284 (52.11%), Postives = 190/284 (66.90%), Query Frame = 3
Query: 198 VTVHDVNDKDDPCACAEYVVDMYKHFKELEEKYTPTVYMHTQMDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLIACKYEEIYPTEVRDCVYITDHAYTREEVLDMEQMILRRLKFQITVPTPWTFLVRFLKVAKATDRQHHRAQYYLERCLQEHDGLSFRPSMLAATSVFLA-RIPDTGLDD---AWSDVLANFCNIPRDGLDCCARLIIKFLLDEPVTASQRHLVAVKKKFMGERFLAVAIDELPKLPAKPNIPA 1037
+ HD ND+ + A YV D+++HF + E K P +YM Q DIN KMRAIL+DW+VEVH+KF+L TLYL ++IDR+C +V RSKLQLVGVTALLIACKYEEIYP EVRDCVYITD AY R+EVLDMEQ IL+RL+F+ITVPT + FL+RFL + KA+ A YY+ER LQEHD L F+PS++AA++V LA PD D VL + L CA +I + +EPVTAS+R LVAVK+K+ ++ V+ +PN+ A
Sbjct: 229 IAPHDTNDRGNTLQVAPYVTDIFQHFFQAEAKSCPEMYMDQQADINAKMRAILVDWLVEVHMKFRLVPDTLYLCINLIDRYCSHVSVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYNRQEVLDMEQDILQRLRFKITVPTAYPFLLRFLNMTKASQLSRIAANYYMERTLQEHDLLKFKPSVVAASAVVLALNNPDISDDHDCPGMPTVLMEYTGFQPSELMACAAIIATKVGEEPVTASRRQLVAVKRKYDHRKYQHVSTTV-----RQPNVDA 507
BLAST of mRNA_H-paniculata_contig4399.11144.1 vs. uniprot
Match: A0A7S1ZPT4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZPT4_TRICV) HSP 1 Score: 270 bits (690), Expect = 1.470e-77 Identity = 144/271 (53.14%), Postives = 183/271 (67.53%), Query Frame = 3
Query: 198 VTVHDVNDKDDPCACAEYVVDMYKHFKELEEKYTPTVYMHTQMDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLIACKYEEIYPTEVRDCVYITDHAYTREEVLDMEQMILRRLKFQITVPTPWTFLVRFLKVAKATDRQHHRAQYYLERCLQEHDGLSFRPSMLAATSVFLAR----IP-DTG-LDDAWSDVLANFCNIPRDGLDCCARLIIKFLLDEPVTASQRHLVAVKKKFMGERFLAVA 992
+ HD DK++ YV D+++H E + P +YMH Q DIN KMRAIL+DW+VEVH+KF L TLYL +IIDR+C +V RSKLQLVGVTALLIACKYEEIYP EVRDCVYITD AY R+EVLDMEQ +L+RL+F+ITVPT + FL RFL + KA A YY+ER LQEHD L ++PS++AA+ V LA IP DT L+ +L + L CA+LI + ++PVTAS+R LVAVK+K+ +F V+
Sbjct: 188 IAPHDACDKENVLKVVPYVTDIFQHLYRAEARSCPEIYMHNQADINAKMRAILVDWLVEVHMKFHLVPETLYLCINIIDRYCSQVSVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYNRQEVLDMEQDMLQRLRFKITVPTAYPFLQRFLSLTKAPQLAQFAANYYMERTLQEHDLLQYKPSVVAASCVILALSNPDIPADTETLNPGMPRILLEYTGFEEKVLLSCAKLIATKVGEDPVTASKRQLVAVKRKYGHGKFRHVS 458
BLAST of mRNA_H-paniculata_contig4399.11144.1 vs. uniprot
Match: A0A6V2B684_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2B684_9STRA) HSP 1 Score: 270 bits (691), Expect = 5.170e-77 Identity = 143/290 (49.31%), Postives = 192/290 (66.21%), Query Frame = 3
Query: 198 VTVHDVNDKDDPCACAEYVVDMYKHFKELEEKYTPTVYMHTQMDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLIACKYEEIYPTEVRDCVYITDHAYTREEVLDMEQMILRRLKFQITVPTPWTFLVRFLKVAKATDRQHHRAQYYLERCLQEHDGLSFRPSMLAATSVFLA-RIPDTGLDDAWSD--------VLANFCNIPRDGLDCCARLIIKFLLDEPVTASQRHLVAVKKKFMGERFLAVAIDELPKLPAKPNIPAN 1040
+ HD +D D+P ++YV D+++H E + P +YM Q DIN KMRAIL+DW+VEVH+KF+L TLYL +IIDR+C V RSKLQLVGVTALLIACKYEEIYP EVRDCVYITD AY ++EVLDMEQ +L RL+F+ITVPT + F++RFL + KA+ + A YY+ER LQEHD L RPS++ A SV LA PD ++ S+ +L + + + CA +I + + +EPVTAS+R LVAVK+K+ ++ V+ + P+ NI N
Sbjct: 246 IAKHDEDDADEPLLVSDYVTDIFQHLFNAETRSRPRMYMDKQRDINAKMRAILVDWLVEVHMKFRLVPETLYLCVNIIDRYCNQVPVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYHKQEVLDMEQDMLHRLRFKITVPTAYPFILRFLNITKASSVARYAAHYYMERTLQEHDLLLHRPSLVCAASVVLALNNPDIIAKESTSNRERPGVPKILLEYTGFSKSDILECAAVIARKVGEEPVTASRRQLVAVKRKYDNRKYFHVSSNFAQ--PSVQNICPN 533
BLAST of mRNA_H-paniculata_contig4399.11144.1 vs. uniprot
Match: A0A6U6K965_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6K965_9STRA) HSP 1 Score: 253 bits (646), Expect = 6.630e-74 Identity = 137/255 (53.73%), Postives = 173/255 (67.84%), Query Frame = 3
Query: 285 EEKYTPTVYMHTQMDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLIACKYEEIYPTEVRDCVYITDHAYTREEVLDMEQMILRRLKFQITVPTPWTFLVRFLKVAKATDRQHHRAQYYLERCLQEHDGLSFRPSMLAATSVFLA-RIPDTGLDD---AWSDVLANFCNIPRDGLDCCARLIIKFLLDEPVTASQRHLVAVKKKFMGERFLAVAIDELPKLPAKPNIPA 1037
+ K P +YM Q DIN KMRAIL+DW+VEVH+KF+L TLYL ++IDR+C +V RSKLQLVGVTALLIACKYEEIYP EVRDCVYITD AY R+EVLDMEQ IL+RL+F+ITVPT + FL+RFL + KA+ A YY+ER LQEHD L F+PS++AA++V LA PD D VL + L CA +I + +EPVTAS+R LVAVK+K+ ++ V+ +PN+ A
Sbjct: 17 QAKSCPEMYMDQQADINAKMRAILVDWLVEVHMKFRLVPDTLYLCINLIDRYCSHVSVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYNRQEVLDMEQDILQRLRFKITVPTAYPFLLRFLNMTKASQLSRIAANYYMERTLQEHDLLKFKPSVVAASAVVLALNNPDISDDHDCPGMPTVLMEYTGFQPSELMACAAIIATKVGEEPVTASRRQLVAVKRKYDHRKYQHVSTTV-----RQPNVDA 266
BLAST of mRNA_H-paniculata_contig4399.11144.1 vs. uniprot
Match: A0A7S2PQG9_9STRA (G2/mitotic-specific cyclin-B3 n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PQG9_9STRA) HSP 1 Score: 260 bits (664), Expect = 1.050e-73 Identity = 137/279 (49.10%), Postives = 185/279 (66.31%), Query Frame = 3
Query: 207 HDVNDKDDPCACAEYVVDMYKHFKELEEKYTPTVYMHTQMDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLIACKYEEIYPTEVRDCVYITDHAYTREEVLDMEQMILRRLKFQITVPTPWTFLVRFLKVAKATDRQHHRAQYYLERCLQEHDGLSFRPSMLAATSVFLA------RIPDTGLD---DAWSDVLANFCNIPRDGLDCCARLIIKFLLDEPVTASQRHLVAVKKKFMGERFLAVAID-ELPKL 1013
+D + DP AEY+ D+++H + E +Y YM Q DIN +MRAILIDW+VEVH+KF+L TLYL IIDR+C +V RSKLQL+GVTALL+ACK+EEIYP EVRDCVYITD AY R+EVLDMEQ IL+ L ++I+VPT + FL RFL ++ A++ H A YYLER LQEH L FRPS++ A++V LA R+ + LD + +L + L C + + + +EP+TAS+R L AVKKK+ ++L V+ + ELP +
Sbjct: 208 YDAARRSDPQKVAEYITDLFQHLYKAETRYKVAPYMFRQEDINARMRAILIDWLVEVHMKFRLVPETLYLCVSIIDRYCCKVDVLRSKLQLIGVTALLVACKHEEIYPPEVRDCVYITDRAYNRQEVLDMEQEILKVLDWKISVPTAFPFLDRFLCLSDASEMTKHAAAYYLERTLQEHSFLQFRPSVVCASAVILALNNPDIRVQEEDLDRELPGFPKILMEYTGFSEFELTTCMERMAEKVGEEPITASRRQLNAVKKKYENSKYLEVSTNVELPNV 486 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4399.11144.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4399.11144.1 >prot_H-paniculata_contig4399.11144.1 ID=prot_H-paniculata_contig4399.11144.1|Name=mRNA_H-paniculata_contig4399.11144.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=261bp MYKHFKELEEKYTPTVYMHTQMDINCKMRAILIDWIVEVHLKFKLADPTLback to top mRNA from alignment at H-paniculata_contig4399:5430..9974+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4399.11144.1 ID=mRNA_H-paniculata_contig4399.11144.1|Name=mRNA_H-paniculata_contig4399.11144.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4545bp|location=Sequence derived from alignment at H-paniculata_contig4399:5430..9974+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4399:5430..9974+ >mRNA_H-paniculata_contig4399.11144.1 ID=mRNA_H-paniculata_contig4399.11144.1|Name=mRNA_H-paniculata_contig4399.11144.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1566bp|location=Sequence derived from alignment at H-paniculata_contig4399:5430..9974+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |